Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0273

Experiment: marine_broth_2216 with nitrite 20 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0272 and B158DRAFT_0273 are separated by 24 nucleotidesB158DRAFT_0273 and B158DRAFT_0274 overlap by 45 nucleotides B158DRAFT_0272: B158DRAFT_0272 - pyridoxal-dependent decarboxylase, exosortase A system-associated, at 277,488 to 278,714 _0272 B158DRAFT_0273: B158DRAFT_0273 - glycerol-3-phosphate acyltransferase (EC 2.3.1.15), at 278,739 to 281,291 _0273 B158DRAFT_0274: B158DRAFT_0274 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 281,247 to 282,107 _0274 Position (kb) 278 279 280 281 282Strain fitness (log2 ratio) -2 -1 0 1at 281.153 kb on - strandat 281.161 kb on + strandat 281.186 kb on - strandat 281.187 kb on - strandat 281.187 kb on - strandat 281.262 kb on - strandat 281.262 kb on - strandat 282.181 kb on - strandat 282.182 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with nitrite 20 mM
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281,153 - -0.9
281,161 + -0.2
281,186 - -0.6
281,187 - -0.4
281,187 - +0.1
281,262 - -0.4
281,262 - -2.6
282,181 - +0.3
282,182 - +1.2

Or see this region's nucleotide sequence