Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29430

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
6,536,312	+				-0.9
6,536,323	-				-0.4
6,536,327	+				-0.9
6,536,327	+				+0.6
6,536,327	+				+1.0
6,536,327	+				-0.6
6,536,328	-				+0.3
6,536,328	-				+1.4
6,536,412	-				+0.1
6,536,412	-				-0.2
6,536,412	-				+0.2
6,536,412	-				+0.7
6,536,412	-				-0.9
6,536,418	+				-0.8
6,536,418	+				+0.6
6,536,418	+				-1.5
6,536,418	+				+0.1
6,536,418	+				+2.2
6,536,418	+				-0.4
6,536,418	+				-0.0
6,536,418	+				-0.4
6,536,419	-				-0.1
6,536,419	-				-1.7
6,536,419	-				-0.6
6,536,419	-				-2.7
6,536,419	-				-1.8
6,536,419	-				-1.5
6,536,419	-				-1.1
6,536,419	-				+0.6
6,536,530	-				-1.1
6,536,530	-				-1.7
6,536,531	+				+0.2
6,536,531	+				-0.9
6,536,531	+				-0.4
6,536,531	+				-0.2
6,536,531	+				-1.8
6,536,532	-				+0.3
6,536,540	+				-0.6
6,536,540	+				-1.0
6,536,540	+				-0.7
6,536,540	+				-1.5
6,536,540	+				-0.5
6,536,540	+				-2.0
6,536,540	+				-1.8
6,536,541	-				-1.8
6,536,541	-				-0.8
6,536,541	-				-0.1
6,536,541	-				+1.1
6,536,541	-				-1.0
6,536,541	-				-1.1
6,536,541	-				-0.9
6,536,541	-				-3.1
6,536,545	+				-2.9
6,536,546	-				-0.9
6,536,576	+				-0.7
6,536,576	+				-0.9
6,536,582	+				+0.1
6,536,582	+				-0.0
6,536,582	+				-0.9
6,536,582	+				-0.8
6,536,582	+				+0.1
6,536,582	+				-1.8
6,536,582	+				-0.3
6,536,583	-				-0.5
6,536,583	-				-1.4
6,536,583	-				-1.3
6,536,583	-				-1.2
6,536,583	-				-0.5
6,536,583	-				-0.4
6,536,730	+		PFLU_RS29425	0.29	+0.2
6,536,730	+		PFLU_RS29425	0.29	-1.4
6,536,730	+		PFLU_RS29425	0.29	-0.5
6,536,730	+		PFLU_RS29425	0.29	+0.2
6,536,730	+		PFLU_RS29425	0.29	-3.2
6,536,731	-		PFLU_RS29425	0.29	-0.8
6,536,731	-		PFLU_RS29425	0.29	-0.9
6,536,731	-		PFLU_RS29425	0.29	-0.5
6,536,731	-		PFLU_RS29425	0.29	+0.1
6,536,731	-		PFLU_RS29425	0.29	-2.3
6,536,731	-		PFLU_RS29425	0.29	-0.2
6,536,731	-		PFLU_RS29425	0.29	-0.8
6,536,731	-		PFLU_RS29425	0.29	-0.4
6,536,731	-		PFLU_RS29425	0.29	-0.2
6,536,731	-		PFLU_RS29425	0.29	-0.3
6,536,731	-		PFLU_RS29425	0.29	-0.8
6,536,739	+		PFLU_RS29425	0.31	-0.8
6,536,739	+		PFLU_RS29425	0.31	+0.6
6,536,739	+		PFLU_RS29425	0.31	-2.0
6,536,739	+		PFLU_RS29425	0.31	+0.6
6,536,739	+		PFLU_RS29425	0.31	-0.4
6,536,739	+		PFLU_RS29425	0.31	-0.1
6,536,739	+		PFLU_RS29425	0.31	-1.7
6,536,739	+		PFLU_RS29425	0.31	-0.2
6,536,740	-		PFLU_RS29425	0.32	-1.8
6,536,740	-		PFLU_RS29425	0.32	-1.5
6,536,740	-		PFLU_RS29425	0.32	-2.2
6,536,740	-		PFLU_RS29425	0.32	-0.5
6,536,740	-		PFLU_RS29425	0.32	-0.9
6,536,808	+		PFLU_RS29425	0.50	-0.9
6,536,808	+		PFLU_RS29425	0.50	-1.7
6,536,808	+		PFLU_RS29425	0.50	-0.3
6,536,808	+		PFLU_RS29425	0.50	-0.1
6,536,808	+		PFLU_RS29425	0.50	-0.5
6,536,808	+		PFLU_RS29425	0.50	+0.3
6,536,808	+		PFLU_RS29425	0.50	-0.3
6,536,808	+		PFLU_RS29425	0.50	-1.0
6,536,808	+		PFLU_RS29425	0.50	-0.9
6,536,809	-		PFLU_RS29425	0.51	-0.5
6,536,809	-		PFLU_RS29425	0.51	-0.1
6,536,809	-		PFLU_RS29425	0.51	-3.2
6,536,809	-		PFLU_RS29425	0.51	-0.4
6,536,809	-		PFLU_RS29425	0.51	+0.1
6,536,809	-		PFLU_RS29425	0.51	+0.4
6,536,809	-		PFLU_RS29425	0.51	+0.4
6,536,809	-		PFLU_RS29425	0.51	-0.0
6,536,809	-		PFLU_RS29425	0.51	-2.9
6,536,809	-		PFLU_RS29425	0.51	-0.2
6,536,809	-		PFLU_RS29425	0.51	+0.5
6,536,824	-		PFLU_RS29425	0.55	-0.6
6,536,824	-		PFLU_RS29425	0.55	-1.0
6,536,854	+		PFLU_RS29425	0.63	-0.5
6,536,854	+		PFLU_RS29425	0.63	-0.6
6,536,854	+		PFLU_RS29425	0.63	-0.5
6,536,854	+		PFLU_RS29425	0.63	+0.1
6,536,854	+		PFLU_RS29425	0.63	-0.4
6,536,854	+		PFLU_RS29425	0.63	-0.8
6,536,855	-		PFLU_RS29425	0.63	-0.2
6,536,855	-		PFLU_RS29425	0.63	+2.1
6,536,855	-		PFLU_RS29425	0.63	+0.7
6,536,855	-		PFLU_RS29425	0.63	-0.6
6,536,961	+				-0.9
6,536,961	+				-0.1
6,536,961	+				+0.4
6,536,961	+				-0.3
6,536,961	+				-0.5
6,536,961	+				-0.1
6,536,961	+				-0.4
6,536,961	+				+0.3
6,536,961	+				+0.1
6,536,962	-				-0.1
6,536,962	-				-1.2
6,537,028	-				+0.2
6,537,061	-				-1.4
6,537,061	-				+0.1
6,537,143	-		PFLU_RS29430	0.54	-0.8
6,537,143	-		PFLU_RS29430	0.54	-0.5
6,537,143	-		PFLU_RS29430	0.54	-0.4
6,537,143	-		PFLU_RS29430	0.54	-2.2
6,537,166	-		PFLU_RS29430	0.69	-0.0
6,537,166	-		PFLU_RS29430	0.69	-0.7
6,537,166	-		PFLU_RS29430	0.69	+0.2
6,537,228	-				-0.6
6,537,660	+				-1.5
6,537,660	+				-1.4
6,537,661	-				+0.8
6,537,739	+				-2.0
6,537,832	+				-0.7
6,537,832	+				+0.2
6,537,833	-				-0.3
6,537,840	+				+0.4
6,537,840	+				-0.3
6,537,840	+				-1.0
6,537,841	-				+0.5
6,537,841	-				-0.5
6,537,841	-				+0.1
6,537,841	-				-1.1
6,537,841	-				+0.7
6,537,841	-				+0.5
6,537,841	-				+0.5
6,537,841	-				+0.3
6,537,844	+				+0.8
6,537,844	+				-1.1
6,537,844	+				+1.3
6,537,844	+				+0.2
6,537,844	+				-0.8
6,537,855	+				-0.2
6,537,946	+				+1.6
6,537,947	-				+0.5
6,537,955	+				-0.5
6,537,956	-				+0.5
6,537,956	-				+0.4
6,537,956	-				-0.9
6,537,956	-				-0.9
6,538,038	+				-0.7
6,538,038	+				+1.1
6,538,038	+				+0.2
6,538,038	+				+1.0
6,538,038	+				+0.9
6,538,038	+				-0.0
6,538,038	+				-0.1
6,538,038	+				-0.0
6,538,038	+				+0.4
6,538,038	+				+0.3
6,538,039	-				+0.1
6,538,039	-				-0.2
6,538,039	-				-0.4
6,538,039	-				+0.8
6,538,039	-				+0.6
6,538,039	-				-0.7
6,538,039	-				+0.7
6,538,039	-				+0.6
6,538,039	-				+0.2
6,538,098	+		PFLU_RS29440	0.11	+0.3
6,538,098	+		PFLU_RS29440	0.11	+0.5
6,538,098	+		PFLU_RS29440	0.11	+0.2
6,538,099	-		PFLU_RS29440	0.11	+0.4
6,538,099	-		PFLU_RS29440	0.11	+2.0
6,538,099	-		PFLU_RS29440	0.11	-0.8
6,538,099	-		PFLU_RS29440	0.11	-0.6
6,538,099	-		PFLU_RS29440	0.11	-0.4
6,538,099	-		PFLU_RS29440	0.11	-0.4
6,538,099	-		PFLU_RS29440	0.11	+0.4
6,538,170	+		PFLU_RS29440	0.16	+0.1
6,538,170	+		PFLU_RS29440	0.16	+1.1
6,538,170	+		PFLU_RS29440	0.16	+0.6
6,538,170	+		PFLU_RS29440	0.16	-0.8
6,538,170	+		PFLU_RS29440	0.16	+1.1
6,538,170	+		PFLU_RS29440	0.16	-0.1
6,538,170	+		PFLU_RS29440	0.16	+0.3
6,538,170	+		PFLU_RS29440	0.16	+1.2
6,538,170	+		PFLU_RS29440	0.16	+0.7
6,538,170	+		PFLU_RS29440	0.16	+0.2
6,538,170	+		PFLU_RS29440	0.16	-0.3
6,538,170	+		PFLU_RS29440	0.16	-0.2
6,538,170	+		PFLU_RS29440	0.16	+0.5
6,538,170	+		PFLU_RS29440	0.16	-1.1
6,538,170	+		PFLU_RS29440	0.16	+0.0
6,538,170	+		PFLU_RS29440	0.16	+0.3
6,538,170	+		PFLU_RS29440	0.16	-0.6
6,538,171	-		PFLU_RS29440	0.16	+0.9
6,538,171	-		PFLU_RS29440	0.16	+0.2
6,538,171	-		PFLU_RS29440	0.16	+0.4
6,538,171	-		PFLU_RS29440	0.16	-0.8
6,538,171	-		PFLU_RS29440	0.16	-0.7
6,538,171	-		PFLU_RS29440	0.16	+1.3
6,538,171	-		PFLU_RS29440	0.16	-0.6
6,538,171	-		PFLU_RS29440	0.16	-1.6
6,538,171	-		PFLU_RS29440	0.16	+0.1
6,538,171	-		PFLU_RS29440	0.16	+0.2
6,538,171	-		PFLU_RS29440	0.16	+0.1
6,538,171	-		PFLU_RS29440	0.16	+0.2
6,538,172	+		PFLU_RS29440	0.16	-0.1
6,538,172	+		PFLU_RS29440	0.16	+0.0
6,538,172	+		PFLU_RS29440	0.16	-0.0
6,538,172	+		PFLU_RS29440	0.16	-0.4
6,538,172	+		PFLU_RS29440	0.16	+0.5
6,538,172	+		PFLU_RS29440	0.16	+0.5
6,538,172	+		PFLU_RS29440	0.16	+0.2
6,538,172	+		PFLU_RS29440	0.16	+0.1
6,538,173	-		PFLU_RS29440	0.16	+1.1
6,538,173	-		PFLU_RS29440	0.16	-1.0
6,538,173	-		PFLU_RS29440	0.16	+0.0
6,538,173	-		PFLU_RS29440	0.16	+0.7
6,538,173	-		PFLU_RS29440	0.16	+0.5