Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS25585 and PFLU_RS25590 overlap by 4 nucleotides PFLU_RS25590 and PFLU_RS25595 overlap by 4 nucleotides
PFLU_RS25585: PFLU_RS25585 - exodeoxyribonuclease V subunit alpha, at 5,707,678 to 5,709,783
_RS25585
PFLU_RS25590: PFLU_RS25590 - exodeoxyribonuclease V subunit beta, at 5,709,780 to 5,713,454
_RS25590
PFLU_RS25595: PFLU_RS25595 - exodeoxyribonuclease V subunit gamma, at 5,713,451 to 5,716,900
_RS25595
Position (kb) 5709
5710
5711
5712
5713
5714 Strain fitness (log2 ratio) -2
-1
0
1 at 5709.095 kb on - strand, within PFLU_RS25585 at 5709.095 kb on - strand, within PFLU_RS25585 at 5709.095 kb on - strand, within PFLU_RS25585 at 5709.344 kb on + strand, within PFLU_RS25585 at 5709.345 kb on - strand, within PFLU_RS25585 at 5709.345 kb on - strand, within PFLU_RS25585 at 5709.619 kb on + strand at 5709.620 kb on - strand at 5709.620 kb on - strand at 5709.783 kb on + strand at 5709.783 kb on + strand at 5709.783 kb on + strand at 5709.784 kb on - strand at 5709.784 kb on - strand at 5709.784 kb on - strand at 5709.784 kb on - strand at 5709.890 kb on - strand at 5709.890 kb on - strand at 5709.931 kb on + strand at 5709.931 kb on + strand at 5709.932 kb on - strand at 5709.932 kb on - strand at 5709.958 kb on + strand at 5709.958 kb on + strand at 5709.958 kb on + strand at 5709.959 kb on - strand at 5709.964 kb on + strand at 5709.965 kb on - strand at 5710.009 kb on + strand at 5710.010 kb on - strand at 5710.018 kb on + strand at 5710.018 kb on + strand at 5710.018 kb on + strand at 5710.018 kb on + strand at 5710.018 kb on + strand at 5710.018 kb on + strand at 5710.018 kb on + strand at 5710.019 kb on - strand at 5710.019 kb on - strand at 5710.019 kb on - strand at 5710.019 kb on - strand at 5710.019 kb on - strand at 5710.019 kb on - strand at 5710.073 kb on - strand at 5710.108 kb on + strand at 5710.108 kb on + strand at 5710.120 kb on + strand at 5710.120 kb on + strand at 5710.120 kb on + strand at 5710.120 kb on + strand at 5710.120 kb on + strand at 5710.121 kb on - strand at 5710.121 kb on - strand at 5710.121 kb on - strand at 5710.121 kb on - strand at 5710.121 kb on - strand at 5710.154 kb on + strand, within PFLU_RS25590 at 5710.169 kb on + strand, within PFLU_RS25590 at 5710.169 kb on + strand, within PFLU_RS25590 at 5710.170 kb on - strand, within PFLU_RS25590 at 5710.170 kb on - strand, within PFLU_RS25590 at 5710.222 kb on + strand, within PFLU_RS25590 at 5710.223 kb on - strand, within PFLU_RS25590 at 5710.223 kb on - strand, within PFLU_RS25590 at 5710.223 kb on - strand, within PFLU_RS25590 at 5710.251 kb on + strand, within PFLU_RS25590 at 5710.251 kb on + strand, within PFLU_RS25590 at 5710.251 kb on + strand, within PFLU_RS25590 at 5710.251 kb on + strand, within PFLU_RS25590 at 5710.297 kb on + strand, within PFLU_RS25590 at 5710.298 kb on - strand, within PFLU_RS25590 at 5710.298 kb on - strand, within PFLU_RS25590 at 5710.404 kb on - strand, within PFLU_RS25590 at 5710.672 kb on + strand, within PFLU_RS25590 at 5710.673 kb on - strand, within PFLU_RS25590 at 5710.673 kb on - strand, within PFLU_RS25590 at 5710.789 kb on + strand, within PFLU_RS25590 at 5710.789 kb on + strand, within PFLU_RS25590 at 5710.790 kb on - strand, within PFLU_RS25590 at 5710.880 kb on - strand, within PFLU_RS25590 at 5710.910 kb on + strand, within PFLU_RS25590 at 5710.910 kb on + strand, within PFLU_RS25590 at 5710.910 kb on + strand, within PFLU_RS25590 at 5710.910 kb on + strand, within PFLU_RS25590 at 5710.910 kb on + strand, within PFLU_RS25590 at 5710.911 kb on - strand, within PFLU_RS25590 at 5710.911 kb on - strand, within PFLU_RS25590 at 5710.911 kb on - strand, within PFLU_RS25590 at 5710.911 kb on - strand, within PFLU_RS25590 at 5710.911 kb on - strand, within PFLU_RS25590 at 5710.911 kb on - strand, within PFLU_RS25590 at 5710.911 kb on - strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.981 kb on + strand, within PFLU_RS25590 at 5710.982 kb on - strand, within PFLU_RS25590 at 5710.982 kb on - strand, within PFLU_RS25590 at 5710.982 kb on - strand, within PFLU_RS25590 at 5710.982 kb on - strand, within PFLU_RS25590 at 5710.982 kb on - strand, within PFLU_RS25590 at 5710.982 kb on - strand, within PFLU_RS25590 at 5710.982 kb on - strand, within PFLU_RS25590 at 5710.982 kb on - strand, within PFLU_RS25590 at 5711.042 kb on + strand, within PFLU_RS25590 at 5711.083 kb on + strand, within PFLU_RS25590 at 5711.152 kb on + strand, within PFLU_RS25590 at 5711.153 kb on - strand, within PFLU_RS25590 at 5711.153 kb on - strand, within PFLU_RS25590 at 5711.671 kb on - strand, within PFLU_RS25590 at 5711.671 kb on - strand, within PFLU_RS25590 at 5711.792 kb on + strand, within PFLU_RS25590 at 5711.793 kb on - strand, within PFLU_RS25590 at 5711.861 kb on - strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.892 kb on + strand, within PFLU_RS25590 at 5711.893 kb on - strand, within PFLU_RS25590 at 5711.893 kb on - strand, within PFLU_RS25590 at 5711.893 kb on - strand, within PFLU_RS25590 at 5711.931 kb on - strand, within PFLU_RS25590 at 5712.045 kb on + strand, within PFLU_RS25590 at 5712.054 kb on + strand, within PFLU_RS25590 at 5712.139 kb on + strand, within PFLU_RS25590 at 5712.140 kb on - strand, within PFLU_RS25590 at 5712.140 kb on - strand, within PFLU_RS25590 at 5712.140 kb on - strand, within PFLU_RS25590 at 5712.145 kb on + strand, within PFLU_RS25590 at 5712.145 kb on + strand, within PFLU_RS25590 at 5712.145 kb on + strand, within PFLU_RS25590 at 5712.145 kb on + strand, within PFLU_RS25590 at 5712.145 kb on + strand, within PFLU_RS25590 at 5712.145 kb on + strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.146 kb on - strand, within PFLU_RS25590 at 5712.169 kb on + strand, within PFLU_RS25590 at 5712.170 kb on - strand, within PFLU_RS25590 at 5712.170 kb on - strand, within PFLU_RS25590 at 5712.170 kb on - strand, within PFLU_RS25590 at 5712.235 kb on + strand, within PFLU_RS25590 at 5712.235 kb on + strand, within PFLU_RS25590 at 5712.235 kb on + strand, within PFLU_RS25590 at 5712.235 kb on + strand, within PFLU_RS25590 at 5712.236 kb on - strand, within PFLU_RS25590 at 5712.236 kb on - strand, within PFLU_RS25590 at 5712.236 kb on - strand, within PFLU_RS25590 at 5712.256 kb on + strand, within PFLU_RS25590 at 5712.256 kb on + strand, within PFLU_RS25590 at 5712.256 kb on + strand, within PFLU_RS25590 at 5712.256 kb on + strand, within PFLU_RS25590 at 5712.257 kb on - strand, within PFLU_RS25590 at 5712.257 kb on - strand, within PFLU_RS25590 at 5712.257 kb on - strand, within PFLU_RS25590 at 5712.257 kb on - strand, within PFLU_RS25590 at 5712.560 kb on + strand, within PFLU_RS25590 at 5712.662 kb on - strand, within PFLU_RS25590 at 5712.852 kb on + strand, within PFLU_RS25590 at 5712.861 kb on + strand, within PFLU_RS25590 at 5713.354 kb on + strand at 5713.367 kb on + strand at 5713.367 kb on + strand at 5713.368 kb on - strand at 5713.507 kb on - strand at 5713.558 kb on - strand at 5713.558 kb on - strand at 5713.558 kb on - strand at 5713.629 kb on + strand at 5713.629 kb on + strand at 5713.630 kb on - strand at 5713.636 kb on + strand at 5713.637 kb on - strand at 5713.729 kb on + strand at 5713.777 kb on + strand at 5713.778 kb on - strand at 5714.057 kb on + strand, within PFLU_RS25595 at 5714.058 kb on - strand, within PFLU_RS25595 at 5714.241 kb on + strand, within PFLU_RS25595 at 5714.242 kb on - strand, within PFLU_RS25595 at 5714.242 kb on - strand, within PFLU_RS25595 at 5714.310 kb on - strand, within PFLU_RS25595
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 5,709,095 - PFLU_RS25585 0.67 -1.8 5,709,095 - PFLU_RS25585 0.67 -1.1 5,709,095 - PFLU_RS25585 0.67 -1.1 5,709,344 + PFLU_RS25585 0.79 -1.1 5,709,345 - PFLU_RS25585 0.79 +0.2 5,709,345 - PFLU_RS25585 0.79 -1.4 5,709,619 + -1.3 5,709,620 - +1.0 5,709,620 - -1.3 5,709,783 + -0.4 5,709,783 + -1.6 5,709,783 + +1.0 5,709,784 - -0.2 5,709,784 - +0.5 5,709,784 - -0.5 5,709,784 - +0.5 5,709,890 - +0.1 5,709,890 - -1.1 5,709,931 + -1.5 5,709,931 + -1.5 5,709,932 - +0.5 5,709,932 - -1.0 5,709,958 + +0.6 5,709,958 + -0.3 5,709,958 + -1.1 5,709,959 - -0.6 5,709,964 + -1.1 5,709,965 - -1.3 5,710,009 + -1.3 5,710,010 - -0.4 5,710,018 + -1.4 5,710,018 + -0.6 5,710,018 + -0.5 5,710,018 + -1.2 5,710,018 + -0.7 5,710,018 + +0.7 5,710,018 + -2.2 5,710,019 - -2.2 5,710,019 - -1.8 5,710,019 - -1.1 5,710,019 - -1.0 5,710,019 - +0.4 5,710,019 - -1.6 5,710,073 - -0.7 5,710,108 + +0.5 5,710,108 + -0.8 5,710,120 + -0.3 5,710,120 + -1.1 5,710,120 + -0.8 5,710,120 + -0.6 5,710,120 + -1.4 5,710,121 - -0.5 5,710,121 - -2.5 5,710,121 - -1.5 5,710,121 - -1.8 5,710,121 - -1.0 5,710,154 + PFLU_RS25590 0.10 -0.7 5,710,169 + PFLU_RS25590 0.11 -1.6 5,710,169 + PFLU_RS25590 0.11 -0.8 5,710,170 - PFLU_RS25590 0.11 -1.3 5,710,170 - PFLU_RS25590 0.11 +1.3 5,710,222 + PFLU_RS25590 0.12 -0.7 5,710,223 - PFLU_RS25590 0.12 -1.0 5,710,223 - PFLU_RS25590 0.12 -1.6 5,710,223 - PFLU_RS25590 0.12 -1.6 5,710,251 + PFLU_RS25590 0.13 -1.7 5,710,251 + PFLU_RS25590 0.13 -1.6 5,710,251 + PFLU_RS25590 0.13 -1.3 5,710,251 + PFLU_RS25590 0.13 -1.8 5,710,297 + PFLU_RS25590 0.14 -0.4 5,710,298 - PFLU_RS25590 0.14 -0.8 5,710,298 - PFLU_RS25590 0.14 -1.8 5,710,404 - PFLU_RS25590 0.17 -0.8 5,710,672 + PFLU_RS25590 0.24 -0.6 5,710,673 - PFLU_RS25590 0.24 -0.4 5,710,673 - PFLU_RS25590 0.24 +0.5 5,710,789 + PFLU_RS25590 0.27 -1.0 5,710,789 + PFLU_RS25590 0.27 -1.1 5,710,790 - PFLU_RS25590 0.27 +0.3 5,710,880 - PFLU_RS25590 0.30 -1.3 5,710,910 + PFLU_RS25590 0.31 -0.8 5,710,910 + PFLU_RS25590 0.31 -0.8 5,710,910 + PFLU_RS25590 0.31 -1.1 5,710,910 + PFLU_RS25590 0.31 +0.2 5,710,910 + PFLU_RS25590 0.31 -1.3 5,710,911 - PFLU_RS25590 0.31 -1.6 5,710,911 - PFLU_RS25590 0.31 -1.2 5,710,911 - PFLU_RS25590 0.31 +0.2 5,710,911 - PFLU_RS25590 0.31 -1.4 5,710,911 - PFLU_RS25590 0.31 +0.8 5,710,911 - PFLU_RS25590 0.31 -0.4 5,710,911 - PFLU_RS25590 0.31 -0.3 5,710,981 + PFLU_RS25590 0.33 +0.1 5,710,981 + PFLU_RS25590 0.33 -0.7 5,710,981 + PFLU_RS25590 0.33 -1.8 5,710,981 + PFLU_RS25590 0.33 -0.7 5,710,981 + PFLU_RS25590 0.33 -1.7 5,710,981 + PFLU_RS25590 0.33 -0.8 5,710,981 + PFLU_RS25590 0.33 -1.1 5,710,981 + PFLU_RS25590 0.33 -0.9 5,710,981 + PFLU_RS25590 0.33 -0.6 5,710,981 + PFLU_RS25590 0.33 -1.2 5,710,981 + PFLU_RS25590 0.33 -0.3 5,710,982 - PFLU_RS25590 0.33 -0.6 5,710,982 - PFLU_RS25590 0.33 -1.0 5,710,982 - PFLU_RS25590 0.33 -0.7 5,710,982 - PFLU_RS25590 0.33 -1.1 5,710,982 - PFLU_RS25590 0.33 -1.8 5,710,982 - PFLU_RS25590 0.33 -1.1 5,710,982 - PFLU_RS25590 0.33 +0.6 5,710,982 - PFLU_RS25590 0.33 -0.3 5,711,042 + PFLU_RS25590 0.34 -1.5 5,711,083 + PFLU_RS25590 0.35 -1.1 5,711,152 + PFLU_RS25590 0.37 -2.1 5,711,153 - PFLU_RS25590 0.37 +0.4 5,711,153 - PFLU_RS25590 0.37 -2.1 5,711,671 - PFLU_RS25590 0.51 -0.3 5,711,671 - PFLU_RS25590 0.51 -0.6 5,711,792 + PFLU_RS25590 0.55 +1.0 5,711,793 - PFLU_RS25590 0.55 -0.6 5,711,861 - PFLU_RS25590 0.57 -1.4 5,711,892 + PFLU_RS25590 0.57 +0.2 5,711,892 + PFLU_RS25590 0.57 -2.1 5,711,892 + PFLU_RS25590 0.57 -1.4 5,711,892 + PFLU_RS25590 0.57 +1.0 5,711,892 + PFLU_RS25590 0.57 -0.7 5,711,892 + PFLU_RS25590 0.57 -0.4 5,711,892 + PFLU_RS25590 0.57 -1.2 5,711,892 + PFLU_RS25590 0.57 -1.4 5,711,892 + PFLU_RS25590 0.57 -0.8 5,711,893 - PFLU_RS25590 0.57 -1.8 5,711,893 - PFLU_RS25590 0.57 -0.7 5,711,893 - PFLU_RS25590 0.57 -1.5 5,711,931 - PFLU_RS25590 0.59 -1.2 5,712,045 + PFLU_RS25590 0.62 -2.0 5,712,054 + PFLU_RS25590 0.62 -0.8 5,712,139 + PFLU_RS25590 0.64 -2.1 5,712,140 - PFLU_RS25590 0.64 -1.9 5,712,140 - PFLU_RS25590 0.64 -0.2 5,712,140 - PFLU_RS25590 0.64 -1.6 5,712,145 + PFLU_RS25590 0.64 +1.0 5,712,145 + PFLU_RS25590 0.64 -1.8 5,712,145 + PFLU_RS25590 0.64 -2.0 5,712,145 + PFLU_RS25590 0.64 -1.1 5,712,145 + PFLU_RS25590 0.64 -0.3 5,712,145 + PFLU_RS25590 0.64 +0.0 5,712,146 - PFLU_RS25590 0.64 -2.3 5,712,146 - PFLU_RS25590 0.64 -1.1 5,712,146 - PFLU_RS25590 0.64 -1.6 5,712,146 - PFLU_RS25590 0.64 -1.0 5,712,146 - PFLU_RS25590 0.64 -0.7 5,712,146 - PFLU_RS25590 0.64 -0.7 5,712,146 - PFLU_RS25590 0.64 -0.6 5,712,146 - PFLU_RS25590 0.64 -0.4 5,712,146 - PFLU_RS25590 0.64 +1.2 5,712,146 - PFLU_RS25590 0.64 -1.1 5,712,146 - PFLU_RS25590 0.64 -1.8 5,712,146 - PFLU_RS25590 0.64 -0.8 5,712,146 - PFLU_RS25590 0.64 -1.2 5,712,169 + PFLU_RS25590 0.65 -1.1 5,712,170 - PFLU_RS25590 0.65 -1.0 5,712,170 - PFLU_RS25590 0.65 -0.6 5,712,170 - PFLU_RS25590 0.65 -1.3 5,712,235 + PFLU_RS25590 0.67 -1.2 5,712,235 + PFLU_RS25590 0.67 -1.1 5,712,235 + PFLU_RS25590 0.67 -0.7 5,712,235 + PFLU_RS25590 0.67 +0.2 5,712,236 - PFLU_RS25590 0.67 -1.3 5,712,236 - PFLU_RS25590 0.67 -0.6 5,712,236 - PFLU_RS25590 0.67 -1.8 5,712,256 + PFLU_RS25590 0.67 -0.8 5,712,256 + PFLU_RS25590 0.67 -0.8 5,712,256 + PFLU_RS25590 0.67 -0.3 5,712,256 + PFLU_RS25590 0.67 -2.2 5,712,257 - PFLU_RS25590 0.67 -2.1 5,712,257 - PFLU_RS25590 0.67 -2.2 5,712,257 - PFLU_RS25590 0.67 -1.3 5,712,257 - PFLU_RS25590 0.67 -2.3 5,712,560 + PFLU_RS25590 0.76 -0.1 5,712,662 - PFLU_RS25590 0.78 +0.3 5,712,852 + PFLU_RS25590 0.84 -1.7 5,712,861 + PFLU_RS25590 0.84 -0.7 5,713,354 + -2.1 5,713,367 + -0.8 5,713,367 + -1.4 5,713,368 - -1.3 5,713,507 - -0.3 5,713,558 - -1.3 5,713,558 - -1.6 5,713,558 - +0.7 5,713,629 + -2.0 5,713,629 + -1.5 5,713,630 - -1.7 5,713,636 + -1.0 5,713,637 - -0.8 5,713,729 + -0.6 5,713,777 + -0.8 5,713,778 - -0.7 5,714,057 + PFLU_RS25595 0.18 -1.4 5,714,058 - PFLU_RS25595 0.18 -0.6 5,714,241 + PFLU_RS25595 0.23 -1.3 5,714,242 - PFLU_RS25595 0.23 +0.2 5,714,242 - PFLU_RS25595 0.23 -0.3 5,714,310 - PFLU_RS25595 0.25 -1.8
Or see this region's nucleotide sequence