Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24655 and PFLU_RS24660 are separated by 27 nucleotides PFLU_RS24660 and PFLU_RS24665 are separated by 440 nucleotides
PFLU_RS24655: PFLU_RS24655 - phosphoenolpyruvate--protein phosphotransferase, at 5,519,614 to 5,522,127
_RS24655
PFLU_RS24660: PFLU_RS24660 - PTS transporter subunit IIBC, at 5,522,155 to 5,523,852
_RS24660
PFLU_RS24665: PFLU_RS24665 - hypothetical protein, at 5,524,293 to 5,524,556
_RS24665
Position (kb) 5522
5523
5524 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 5521.372 kb on + strand, within PFLU_RS24655 at 5521.373 kb on - strand, within PFLU_RS24655 at 5521.453 kb on + strand, within PFLU_RS24655 at 5521.454 kb on - strand, within PFLU_RS24655 at 5521.454 kb on - strand, within PFLU_RS24655 at 5521.454 kb on - strand, within PFLU_RS24655 at 5521.741 kb on + strand, within PFLU_RS24655 at 5521.783 kb on + strand, within PFLU_RS24655 at 5521.783 kb on + strand, within PFLU_RS24655 at 5521.783 kb on + strand, within PFLU_RS24655 at 5521.784 kb on - strand, within PFLU_RS24655 at 5521.784 kb on - strand, within PFLU_RS24655 at 5521.784 kb on - strand, within PFLU_RS24655 at 5521.784 kb on - strand, within PFLU_RS24655 at 5522.158 kb on + strand at 5522.158 kb on + strand at 5522.158 kb on + strand at 5522.158 kb on + strand at 5522.158 kb on + strand at 5522.158 kb on + strand at 5522.158 kb on + strand at 5522.159 kb on - strand at 5522.159 kb on - strand at 5522.159 kb on - strand at 5522.159 kb on - strand at 5522.159 kb on - strand at 5522.159 kb on - strand at 5522.159 kb on - strand at 5522.494 kb on + strand, within PFLU_RS24660 at 5522.494 kb on + strand, within PFLU_RS24660 at 5522.494 kb on + strand, within PFLU_RS24660 at 5522.494 kb on + strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.495 kb on - strand, within PFLU_RS24660 at 5522.527 kb on + strand, within PFLU_RS24660 at 5522.528 kb on - strand, within PFLU_RS24660 at 5522.599 kb on - strand, within PFLU_RS24660 at 5522.733 kb on + strand, within PFLU_RS24660 at 5522.734 kb on - strand, within PFLU_RS24660 at 5522.819 kb on - strand, within PFLU_RS24660 at 5522.908 kb on + strand, within PFLU_RS24660 at 5522.909 kb on - strand, within PFLU_RS24660 at 5523.015 kb on + strand, within PFLU_RS24660 at 5523.016 kb on - strand, within PFLU_RS24660 at 5523.037 kb on + strand, within PFLU_RS24660 at 5523.084 kb on + strand, within PFLU_RS24660 at 5523.085 kb on - strand, within PFLU_RS24660 at 5523.093 kb on + strand, within PFLU_RS24660 at 5523.108 kb on + strand, within PFLU_RS24660 at 5523.108 kb on + strand, within PFLU_RS24660 at 5523.193 kb on + strand, within PFLU_RS24660 at 5523.205 kb on + strand, within PFLU_RS24660 at 5523.205 kb on + strand, within PFLU_RS24660 at 5523.205 kb on + strand, within PFLU_RS24660 at 5523.205 kb on + strand, within PFLU_RS24660 at 5523.205 kb on + strand, within PFLU_RS24660 at 5523.205 kb on + strand, within PFLU_RS24660 at 5523.206 kb on - strand, within PFLU_RS24660 at 5523.206 kb on - strand, within PFLU_RS24660 at 5523.206 kb on - strand, within PFLU_RS24660 at 5523.206 kb on - strand, within PFLU_RS24660 at 5523.206 kb on - strand, within PFLU_RS24660 at 5523.206 kb on - strand, within PFLU_RS24660 at 5523.206 kb on - strand, within PFLU_RS24660 at 5523.206 kb on - strand, within PFLU_RS24660 at 5523.208 kb on + strand, within PFLU_RS24660 at 5523.208 kb on + strand, within PFLU_RS24660 at 5523.209 kb on - strand, within PFLU_RS24660 at 5523.209 kb on - strand, within PFLU_RS24660 at 5523.209 kb on - strand, within PFLU_RS24660 at 5523.223 kb on + strand, within PFLU_RS24660 at 5523.223 kb on + strand, within PFLU_RS24660 at 5523.224 kb on - strand, within PFLU_RS24660 at 5523.224 kb on - strand, within PFLU_RS24660 at 5523.224 kb on - strand, within PFLU_RS24660 at 5523.224 kb on - strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.319 kb on + strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.320 kb on - strand, within PFLU_RS24660 at 5523.558 kb on + strand, within PFLU_RS24660 at 5523.558 kb on + strand, within PFLU_RS24660 at 5523.558 kb on + strand, within PFLU_RS24660 at 5523.558 kb on + strand, within PFLU_RS24660 at 5523.558 kb on + strand, within PFLU_RS24660 at 5523.558 kb on + strand, within PFLU_RS24660 at 5523.559 kb on - strand, within PFLU_RS24660 at 5523.559 kb on - strand, within PFLU_RS24660 at 5523.559 kb on - strand, within PFLU_RS24660 at 5523.559 kb on - strand, within PFLU_RS24660 at 5523.559 kb on - strand, within PFLU_RS24660 at 5523.792 kb on + strand at 5523.792 kb on + strand at 5524.002 kb on + strand at 5524.002 kb on + strand at 5524.002 kb on + strand at 5524.002 kb on + strand at 5524.290 kb on + strand at 5524.290 kb on + strand at 5524.290 kb on + strand at 5524.290 kb on + strand at 5524.290 kb on + strand at 5524.317 kb on + strand at 5524.317 kb on + strand at 5524.318 kb on - strand at 5524.491 kb on + strand, within PFLU_RS24665 at 5524.492 kb on - strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.559 kb on + strand at 5524.560 kb on - strand at 5524.560 kb on - strand at 5524.586 kb on - strand at 5524.707 kb on + strand at 5524.707 kb on + strand at 5524.707 kb on + strand at 5524.724 kb on + strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.746 kb on - strand at 5524.843 kb on + strand at 5524.843 kb on + strand at 5524.843 kb on + strand at 5524.844 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 5,521,372 + PFLU_RS24655 0.70 -2.6 5,521,373 - PFLU_RS24655 0.70 -3.5 5,521,453 + PFLU_RS24655 0.73 -3.4 5,521,454 - PFLU_RS24655 0.73 -2.8 5,521,454 - PFLU_RS24655 0.73 -2.0 5,521,454 - PFLU_RS24655 0.73 -3.0 5,521,741 + PFLU_RS24655 0.85 -1.3 5,521,783 + PFLU_RS24655 0.86 -4.0 5,521,783 + PFLU_RS24655 0.86 -2.0 5,521,783 + PFLU_RS24655 0.86 -2.5 5,521,784 - PFLU_RS24655 0.86 -2.9 5,521,784 - PFLU_RS24655 0.86 -3.6 5,521,784 - PFLU_RS24655 0.86 -2.0 5,521,784 - PFLU_RS24655 0.86 -3.1 5,522,158 + -2.2 5,522,158 + -3.3 5,522,158 + -2.5 5,522,158 + -3.1 5,522,158 + -2.9 5,522,158 + -3.3 5,522,158 + -1.5 5,522,159 - -2.0 5,522,159 - -2.8 5,522,159 - -3.1 5,522,159 - -0.9 5,522,159 - -3.9 5,522,159 - -4.1 5,522,159 - -1.4 5,522,494 + PFLU_RS24660 0.20 -3.3 5,522,494 + PFLU_RS24660 0.20 -3.8 5,522,494 + PFLU_RS24660 0.20 -4.1 5,522,494 + PFLU_RS24660 0.20 -4.0 5,522,495 - PFLU_RS24660 0.20 -3.0 5,522,495 - PFLU_RS24660 0.20 -0.8 5,522,495 - PFLU_RS24660 0.20 -3.2 5,522,495 - PFLU_RS24660 0.20 -4.6 5,522,495 - PFLU_RS24660 0.20 -2.7 5,522,495 - PFLU_RS24660 0.20 -2.7 5,522,495 - PFLU_RS24660 0.20 -3.2 5,522,495 - PFLU_RS24660 0.20 -3.3 5,522,495 - PFLU_RS24660 0.20 -3.7 5,522,527 + PFLU_RS24660 0.22 -2.6 5,522,528 - PFLU_RS24660 0.22 -2.8 5,522,599 - PFLU_RS24660 0.26 -2.8 5,522,733 + PFLU_RS24660 0.34 -2.8 5,522,734 - PFLU_RS24660 0.34 -3.2 5,522,819 - PFLU_RS24660 0.39 -4.1 5,522,908 + PFLU_RS24660 0.44 -1.7 5,522,909 - PFLU_RS24660 0.44 -2.3 5,523,015 + PFLU_RS24660 0.51 -2.2 5,523,016 - PFLU_RS24660 0.51 -3.4 5,523,037 + PFLU_RS24660 0.52 -4.3 5,523,084 + PFLU_RS24660 0.55 -3.4 5,523,085 - PFLU_RS24660 0.55 -4.0 5,523,093 + PFLU_RS24660 0.55 -2.5 5,523,108 + PFLU_RS24660 0.56 -2.0 5,523,108 + PFLU_RS24660 0.56 -0.8 5,523,193 + PFLU_RS24660 0.61 -3.1 5,523,205 + PFLU_RS24660 0.62 -3.5 5,523,205 + PFLU_RS24660 0.62 -3.2 5,523,205 + PFLU_RS24660 0.62 -3.5 5,523,205 + PFLU_RS24660 0.62 -3.6 5,523,205 + PFLU_RS24660 0.62 -3.4 5,523,205 + PFLU_RS24660 0.62 -2.3 5,523,206 - PFLU_RS24660 0.62 -2.8 5,523,206 - PFLU_RS24660 0.62 -3.5 5,523,206 - PFLU_RS24660 0.62 -2.1 5,523,206 - PFLU_RS24660 0.62 -2.2 5,523,206 - PFLU_RS24660 0.62 -3.9 5,523,206 - PFLU_RS24660 0.62 -3.8 5,523,206 - PFLU_RS24660 0.62 -2.9 5,523,206 - PFLU_RS24660 0.62 -1.3 5,523,208 + PFLU_RS24660 0.62 -1.4 5,523,208 + PFLU_RS24660 0.62 -2.6 5,523,209 - PFLU_RS24660 0.62 -2.2 5,523,209 - PFLU_RS24660 0.62 -2.5 5,523,209 - PFLU_RS24660 0.62 -5.1 5,523,223 + PFLU_RS24660 0.63 -2.1 5,523,223 + PFLU_RS24660 0.63 -3.2 5,523,224 - PFLU_RS24660 0.63 -2.6 5,523,224 - PFLU_RS24660 0.63 -3.8 5,523,224 - PFLU_RS24660 0.63 -3.3 5,523,224 - PFLU_RS24660 0.63 -3.9 5,523,319 + PFLU_RS24660 0.69 -2.7 5,523,319 + PFLU_RS24660 0.69 -1.7 5,523,319 + PFLU_RS24660 0.69 -3.5 5,523,319 + PFLU_RS24660 0.69 -2.7 5,523,319 + PFLU_RS24660 0.69 -1.7 5,523,319 + PFLU_RS24660 0.69 -3.9 5,523,319 + PFLU_RS24660 0.69 -2.2 5,523,319 + PFLU_RS24660 0.69 -3.6 5,523,319 + PFLU_RS24660 0.69 -4.4 5,523,319 + PFLU_RS24660 0.69 -2.2 5,523,319 + PFLU_RS24660 0.69 -2.1 5,523,319 + PFLU_RS24660 0.69 -2.8 5,523,319 + PFLU_RS24660 0.69 -3.8 5,523,320 - PFLU_RS24660 0.69 -2.2 5,523,320 - PFLU_RS24660 0.69 -2.1 5,523,320 - PFLU_RS24660 0.69 -3.1 5,523,320 - PFLU_RS24660 0.69 -4.9 5,523,320 - PFLU_RS24660 0.69 -2.9 5,523,320 - PFLU_RS24660 0.69 -3.1 5,523,320 - PFLU_RS24660 0.69 -3.8 5,523,320 - PFLU_RS24660 0.69 -3.4 5,523,320 - PFLU_RS24660 0.69 -1.7 5,523,558 + PFLU_RS24660 0.83 -2.9 5,523,558 + PFLU_RS24660 0.83 -3.1 5,523,558 + PFLU_RS24660 0.83 -3.7 5,523,558 + PFLU_RS24660 0.83 -1.0 5,523,558 + PFLU_RS24660 0.83 -1.4 5,523,558 + PFLU_RS24660 0.83 -2.9 5,523,559 - PFLU_RS24660 0.83 -3.8 5,523,559 - PFLU_RS24660 0.83 -3.1 5,523,559 - PFLU_RS24660 0.83 -3.7 5,523,559 - PFLU_RS24660 0.83 -2.6 5,523,559 - PFLU_RS24660 0.83 -0.5 5,523,792 + -2.7 5,523,792 + -2.5 5,524,002 + -0.0 5,524,002 + -0.0 5,524,002 + -0.2 5,524,002 + +0.1 5,524,290 + +0.4 5,524,290 + -0.2 5,524,290 + -0.6 5,524,290 + -0.7 5,524,290 + +0.3 5,524,317 + -0.8 5,524,317 + +0.3 5,524,318 - -0.1 5,524,491 + PFLU_RS24665 0.75 -1.3 5,524,492 - PFLU_RS24665 0.75 +0.0 5,524,494 + PFLU_RS24665 0.76 -0.3 5,524,494 + PFLU_RS24665 0.76 +1.3 5,524,494 + PFLU_RS24665 0.76 +0.5 5,524,494 + PFLU_RS24665 0.76 -0.2 5,524,494 + PFLU_RS24665 0.76 +0.1 5,524,494 + PFLU_RS24665 0.76 -0.3 5,524,494 + PFLU_RS24665 0.76 +0.4 5,524,494 + PFLU_RS24665 0.76 +0.5 5,524,494 + PFLU_RS24665 0.76 -2.2 5,524,494 + PFLU_RS24665 0.76 -1.8 5,524,494 + PFLU_RS24665 0.76 -0.4 5,524,495 - PFLU_RS24665 0.77 -0.8 5,524,495 - PFLU_RS24665 0.77 +0.4 5,524,495 - PFLU_RS24665 0.77 -0.7 5,524,495 - PFLU_RS24665 0.77 -0.6 5,524,495 - PFLU_RS24665 0.77 +1.1 5,524,495 - PFLU_RS24665 0.77 +0.1 5,524,495 - PFLU_RS24665 0.77 -0.1 5,524,495 - PFLU_RS24665 0.77 -0.6 5,524,495 - PFLU_RS24665 0.77 -0.7 5,524,495 - PFLU_RS24665 0.77 -1.4 5,524,495 - PFLU_RS24665 0.77 -0.6 5,524,495 - PFLU_RS24665 0.77 -0.0 5,524,495 - PFLU_RS24665 0.77 -0.4 5,524,495 - PFLU_RS24665 0.77 -0.3 5,524,495 - PFLU_RS24665 0.77 +0.4 5,524,495 - PFLU_RS24665 0.77 -0.1 5,524,495 - PFLU_RS24665 0.77 -0.3 5,524,559 + +1.2 5,524,560 - -0.3 5,524,560 - +0.1 5,524,586 - +0.1 5,524,707 + +0.5 5,524,707 + -0.7 5,524,707 + +0.0 5,524,724 + -0.0 5,524,725 - +0.1 5,524,725 - -0.2 5,524,725 - +0.4 5,524,725 - +0.2 5,524,725 - +0.5 5,524,725 - +0.7 5,524,726 + +1.3 5,524,726 + -0.1 5,524,726 + +0.7 5,524,726 + -0.0 5,524,726 + +0.2 5,524,726 + +0.0 5,524,726 + -1.0 5,524,726 + +0.3 5,524,726 + -0.1 5,524,726 + -0.8 5,524,726 + -0.5 5,524,727 - +0.9 5,524,727 - -0.4 5,524,727 - -1.0 5,524,727 - -0.1 5,524,727 - +0.5 5,524,727 - +0.5 5,524,727 - -0.8 5,524,727 - -0.3 5,524,727 - -1.1 5,524,727 - -0.7 5,524,727 - -0.2 5,524,746 - -0.8 5,524,843 + +0.2 5,524,843 + -0.8 5,524,843 + +0.3 5,524,844 - -0.4
Or see this region's nucleotide sequence