Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24630 and PFLU_RS24635 are separated by 37 nucleotides PFLU_RS24635 and PFLU_RS24640 are separated by 262 nucleotides PFLU_RS24640 and PFLU_RS24645 are separated by 10 nucleotides
PFLU_RS24630: PFLU_RS24630 - NUDIX hydrolase, at 5,515,347 to 5,515,895
_RS24630
PFLU_RS24635: PFLU_RS24635 - L,D-transpeptidase family protein, at 5,515,933 to 5,516,436
_RS24635
PFLU_RS24640: PFLU_RS24640 - GntR family transcriptional regulator, at 5,516,699 to 5,517,457
_RS24640
PFLU_RS24645: PFLU_RS24645 - N-acetylglucosamine-6-phosphate deacetylase, at 5,517,468 to 5,518,574
_RS24645
Position (kb) 5516
5517
5518 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5515.717 kb on - strand, within PFLU_RS24630 at 5515.810 kb on + strand, within PFLU_RS24630 at 5515.810 kb on + strand, within PFLU_RS24630 at 5515.810 kb on + strand, within PFLU_RS24630 at 5515.810 kb on + strand, within PFLU_RS24630 at 5515.810 kb on + strand, within PFLU_RS24630 at 5515.810 kb on + strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.811 kb on - strand, within PFLU_RS24630 at 5515.815 kb on + strand, within PFLU_RS24630 at 5515.815 kb on + strand, within PFLU_RS24630 at 5515.816 kb on - strand, within PFLU_RS24630 at 5515.816 kb on - strand, within PFLU_RS24630 at 5515.894 kb on - strand at 5515.894 kb on - strand at 5515.916 kb on - strand at 5515.923 kb on + strand at 5515.953 kb on + strand at 5515.953 kb on + strand at 5515.954 kb on - strand at 5515.954 kb on - strand at 5515.954 kb on - strand at 5515.954 kb on - strand at 5515.954 kb on - strand at 5515.954 kb on - strand at 5516.082 kb on + strand, within PFLU_RS24635 at 5516.083 kb on - strand, within PFLU_RS24635 at 5516.089 kb on + strand, within PFLU_RS24635 at 5516.089 kb on + strand, within PFLU_RS24635 at 5516.089 kb on + strand, within PFLU_RS24635 at 5516.089 kb on + strand, within PFLU_RS24635 at 5516.089 kb on + strand, within PFLU_RS24635 at 5516.089 kb on + strand, within PFLU_RS24635 at 5516.090 kb on - strand, within PFLU_RS24635 at 5516.094 kb on + strand, within PFLU_RS24635 at 5516.094 kb on + strand, within PFLU_RS24635 at 5516.094 kb on + strand, within PFLU_RS24635 at 5516.095 kb on - strand, within PFLU_RS24635 at 5516.095 kb on - strand, within PFLU_RS24635 at 5516.095 kb on - strand, within PFLU_RS24635 at 5516.095 kb on - strand, within PFLU_RS24635 at 5516.095 kb on - strand, within PFLU_RS24635 at 5516.095 kb on - strand, within PFLU_RS24635 at 5516.164 kb on + strand, within PFLU_RS24635 at 5516.164 kb on + strand, within PFLU_RS24635 at 5516.379 kb on + strand, within PFLU_RS24635 at 5516.379 kb on + strand, within PFLU_RS24635 at 5516.379 kb on + strand, within PFLU_RS24635 at 5516.435 kb on - strand at 5516.451 kb on + strand at 5516.457 kb on - strand at 5516.467 kb on + strand at 5516.468 kb on - strand at 5516.500 kb on + strand at 5516.501 kb on - strand at 5516.552 kb on - strand at 5516.631 kb on + strand at 5516.750 kb on + strand at 5516.751 kb on - strand at 5516.852 kb on - strand, within PFLU_RS24640 at 5516.852 kb on - strand, within PFLU_RS24640 at 5516.852 kb on - strand, within PFLU_RS24640 at 5516.852 kb on - strand, within PFLU_RS24640 at 5516.852 kb on - strand, within PFLU_RS24640 at 5516.936 kb on - strand, within PFLU_RS24640 at 5517.206 kb on + strand, within PFLU_RS24640 at 5517.213 kb on - strand, within PFLU_RS24640 at 5517.213 kb on - strand, within PFLU_RS24640 at 5517.297 kb on + strand, within PFLU_RS24640 at 5517.297 kb on + strand, within PFLU_RS24640 at 5517.297 kb on + strand, within PFLU_RS24640 at 5517.298 kb on - strand, within PFLU_RS24640 at 5517.298 kb on - strand, within PFLU_RS24640 at 5517.298 kb on - strand, within PFLU_RS24640 at 5517.298 kb on - strand, within PFLU_RS24640 at 5517.298 kb on - strand, within PFLU_RS24640 at 5517.301 kb on + strand, within PFLU_RS24640 at 5517.301 kb on + strand, within PFLU_RS24640 at 5517.301 kb on + strand, within PFLU_RS24640 at 5517.301 kb on + strand, within PFLU_RS24640 at 5517.301 kb on + strand, within PFLU_RS24640 at 5517.301 kb on + strand, within PFLU_RS24640 at 5517.301 kb on + strand, within PFLU_RS24640 at 5517.302 kb on - strand, within PFLU_RS24640 at 5517.302 kb on - strand, within PFLU_RS24640 at 5517.302 kb on - strand, within PFLU_RS24640 at 5517.302 kb on - strand, within PFLU_RS24640 at 5517.302 kb on - strand, within PFLU_RS24640 at 5517.344 kb on + strand, within PFLU_RS24640 at 5517.383 kb on + strand at 5517.383 kb on + strand at 5517.383 kb on + strand at 5517.383 kb on + strand at 5517.383 kb on + strand at 5517.383 kb on + strand at 5517.383 kb on + strand at 5517.383 kb on + strand at 5517.384 kb on - strand at 5517.384 kb on - strand at 5517.384 kb on - strand at 5517.384 kb on - strand at 5517.384 kb on - strand at 5517.384 kb on - strand at 5517.398 kb on + strand at 5517.398 kb on + strand at 5517.398 kb on + strand at 5517.398 kb on + strand at 5517.399 kb on - strand at 5517.399 kb on - strand at 5517.399 kb on - strand at 5517.401 kb on + strand at 5517.401 kb on + strand at 5517.401 kb on + strand at 5517.402 kb on - strand at 5517.402 kb on - strand at 5517.402 kb on - strand at 5517.402 kb on - strand at 5517.402 kb on - strand at 5517.434 kb on + strand at 5517.434 kb on + strand at 5517.435 kb on - strand at 5517.451 kb on - strand at 5517.455 kb on + strand at 5517.456 kb on - strand at 5517.589 kb on - strand, within PFLU_RS24645 at 5517.589 kb on - strand, within PFLU_RS24645 at 5517.791 kb on + strand, within PFLU_RS24645 at 5517.791 kb on + strand, within PFLU_RS24645 at 5517.792 kb on - strand, within PFLU_RS24645 at 5517.792 kb on - strand, within PFLU_RS24645 at 5517.834 kb on + strand, within PFLU_RS24645 at 5517.834 kb on + strand, within PFLU_RS24645 at 5517.834 kb on + strand, within PFLU_RS24645 at 5517.834 kb on + strand, within PFLU_RS24645 at 5517.834 kb on + strand, within PFLU_RS24645 at 5517.834 kb on + strand, within PFLU_RS24645 at 5517.834 kb on + strand, within PFLU_RS24645 at 5517.835 kb on - strand, within PFLU_RS24645 at 5517.835 kb on - strand, within PFLU_RS24645 at 5517.835 kb on - strand, within PFLU_RS24645 at 5517.835 kb on - strand, within PFLU_RS24645 at 5517.835 kb on - strand, within PFLU_RS24645 at 5517.835 kb on - strand, within PFLU_RS24645 at 5517.835 kb on - strand, within PFLU_RS24645 at 5517.835 kb on - strand, within PFLU_RS24645 at 5517.906 kb on + strand, within PFLU_RS24645 at 5517.906 kb on + strand, within PFLU_RS24645 at 5517.906 kb on + strand, within PFLU_RS24645 at 5517.906 kb on + strand, within PFLU_RS24645 at 5517.906 kb on + strand, within PFLU_RS24645 at 5517.906 kb on + strand, within PFLU_RS24645 at 5517.907 kb on - strand, within PFLU_RS24645 at 5517.907 kb on - strand, within PFLU_RS24645 at 5517.907 kb on - strand, within PFLU_RS24645 at 5517.907 kb on - strand, within PFLU_RS24645 at 5517.907 kb on - strand, within PFLU_RS24645 at 5518.029 kb on + strand, within PFLU_RS24645 at 5518.029 kb on + strand, within PFLU_RS24645 at 5518.029 kb on + strand, within PFLU_RS24645 at 5518.029 kb on + strand, within PFLU_RS24645 at 5518.029 kb on + strand, within PFLU_RS24645 at 5518.029 kb on + strand, within PFLU_RS24645 at 5518.030 kb on - strand, within PFLU_RS24645 at 5518.030 kb on - strand, within PFLU_RS24645 at 5518.030 kb on - strand, within PFLU_RS24645 at 5518.030 kb on - strand, within PFLU_RS24645 at 5518.030 kb on - strand, within PFLU_RS24645 at 5518.030 kb on - strand, within PFLU_RS24645 at 5518.083 kb on + strand, within PFLU_RS24645 at 5518.083 kb on + strand, within PFLU_RS24645 at 5518.083 kb on + strand, within PFLU_RS24645 at 5518.083 kb on + strand, within PFLU_RS24645 at 5518.083 kb on + strand, within PFLU_RS24645 at 5518.083 kb on + strand, within PFLU_RS24645 at 5518.084 kb on - strand, within PFLU_RS24645 at 5518.278 kb on + strand, within PFLU_RS24645 at 5518.278 kb on + strand, within PFLU_RS24645 at 5518.278 kb on + strand, within PFLU_RS24645 at 5518.279 kb on - strand, within PFLU_RS24645 at 5518.279 kb on - strand, within PFLU_RS24645 at 5518.446 kb on + strand, within PFLU_RS24645 at 5518.446 kb on + strand, within PFLU_RS24645 at 5518.447 kb on - strand, within PFLU_RS24645 at 5518.447 kb on - strand, within PFLU_RS24645
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 5,515,717 - PFLU_RS24630 0.67 +0.8 5,515,810 + PFLU_RS24630 0.84 -0.4 5,515,810 + PFLU_RS24630 0.84 -0.3 5,515,810 + PFLU_RS24630 0.84 +0.8 5,515,810 + PFLU_RS24630 0.84 +1.3 5,515,810 + PFLU_RS24630 0.84 -0.3 5,515,810 + PFLU_RS24630 0.84 +0.6 5,515,811 - PFLU_RS24630 0.85 +0.7 5,515,811 - PFLU_RS24630 0.85 +0.4 5,515,811 - PFLU_RS24630 0.85 +0.5 5,515,811 - PFLU_RS24630 0.85 +0.7 5,515,811 - PFLU_RS24630 0.85 +1.0 5,515,811 - PFLU_RS24630 0.85 -1.3 5,515,811 - PFLU_RS24630 0.85 -0.6 5,515,811 - PFLU_RS24630 0.85 +1.2 5,515,811 - PFLU_RS24630 0.85 +1.3 5,515,815 + PFLU_RS24630 0.85 -0.4 5,515,815 + PFLU_RS24630 0.85 -1.4 5,515,816 - PFLU_RS24630 0.85 +0.8 5,515,816 - PFLU_RS24630 0.85 -0.3 5,515,894 - +0.5 5,515,894 - -0.5 5,515,916 - +1.1 5,515,923 + +0.5 5,515,953 + +0.2 5,515,953 + -1.6 5,515,954 - +1.2 5,515,954 - +1.3 5,515,954 - +1.0 5,515,954 - +1.1 5,515,954 - +0.0 5,515,954 - +0.1 5,516,082 + PFLU_RS24635 0.30 -0.2 5,516,083 - PFLU_RS24635 0.30 -0.5 5,516,089 + PFLU_RS24635 0.31 -1.0 5,516,089 + PFLU_RS24635 0.31 -0.9 5,516,089 + PFLU_RS24635 0.31 -1.8 5,516,089 + PFLU_RS24635 0.31 -1.3 5,516,089 + PFLU_RS24635 0.31 -0.4 5,516,089 + PFLU_RS24635 0.31 -0.4 5,516,090 - PFLU_RS24635 0.31 +0.6 5,516,094 + PFLU_RS24635 0.32 -0.4 5,516,094 + PFLU_RS24635 0.32 -0.5 5,516,094 + PFLU_RS24635 0.32 -1.0 5,516,095 - PFLU_RS24635 0.32 +0.2 5,516,095 - PFLU_RS24635 0.32 +0.6 5,516,095 - PFLU_RS24635 0.32 +0.8 5,516,095 - PFLU_RS24635 0.32 +0.6 5,516,095 - PFLU_RS24635 0.32 +1.5 5,516,095 - PFLU_RS24635 0.32 -0.5 5,516,164 + PFLU_RS24635 0.46 -1.4 5,516,164 + PFLU_RS24635 0.46 -0.8 5,516,379 + PFLU_RS24635 0.88 -1.4 5,516,379 + PFLU_RS24635 0.88 -1.6 5,516,379 + PFLU_RS24635 0.88 -3.6 5,516,435 - -3.8 5,516,451 + -2.2 5,516,457 - -2.9 5,516,467 + -3.3 5,516,468 - -2.2 5,516,500 + -4.0 5,516,501 - -3.9 5,516,552 - -4.4 5,516,631 + -0.5 5,516,750 + -2.7 5,516,751 - -2.1 5,516,852 - PFLU_RS24640 0.20 -2.2 5,516,852 - PFLU_RS24640 0.20 -2.7 5,516,852 - PFLU_RS24640 0.20 -2.2 5,516,852 - PFLU_RS24640 0.20 -2.3 5,516,852 - PFLU_RS24640 0.20 -1.0 5,516,936 - PFLU_RS24640 0.31 -2.6 5,517,206 + PFLU_RS24640 0.67 -2.4 5,517,213 - PFLU_RS24640 0.68 -3.1 5,517,213 - PFLU_RS24640 0.68 -4.0 5,517,297 + PFLU_RS24640 0.79 -2.4 5,517,297 + PFLU_RS24640 0.79 -1.8 5,517,297 + PFLU_RS24640 0.79 -2.1 5,517,298 - PFLU_RS24640 0.79 -3.3 5,517,298 - PFLU_RS24640 0.79 -1.3 5,517,298 - PFLU_RS24640 0.79 -3.3 5,517,298 - PFLU_RS24640 0.79 -3.2 5,517,298 - PFLU_RS24640 0.79 -3.5 5,517,301 + PFLU_RS24640 0.79 -2.9 5,517,301 + PFLU_RS24640 0.79 -3.0 5,517,301 + PFLU_RS24640 0.79 -2.3 5,517,301 + PFLU_RS24640 0.79 -2.3 5,517,301 + PFLU_RS24640 0.79 -1.8 5,517,301 + PFLU_RS24640 0.79 -1.3 5,517,301 + PFLU_RS24640 0.79 -2.1 5,517,302 - PFLU_RS24640 0.79 -3.8 5,517,302 - PFLU_RS24640 0.79 -2.4 5,517,302 - PFLU_RS24640 0.79 -1.6 5,517,302 - PFLU_RS24640 0.79 -4.1 5,517,302 - PFLU_RS24640 0.79 -3.6 5,517,344 + PFLU_RS24640 0.85 -1.4 5,517,383 + -2.6 5,517,383 + -2.3 5,517,383 + -2.7 5,517,383 + -1.1 5,517,383 + -3.1 5,517,383 + +0.1 5,517,383 + -1.5 5,517,383 + -2.3 5,517,384 - -3.3 5,517,384 - -2.7 5,517,384 - -2.9 5,517,384 - -2.5 5,517,384 - -1.7 5,517,384 - -2.2 5,517,398 + -2.9 5,517,398 + -0.1 5,517,398 + -2.8 5,517,398 + +2.4 5,517,399 - -1.8 5,517,399 - -2.5 5,517,399 - -4.1 5,517,401 + -0.1 5,517,401 + -0.8 5,517,401 + -0.0 5,517,402 - -2.1 5,517,402 - -1.8 5,517,402 - -2.9 5,517,402 - -3.4 5,517,402 - -3.9 5,517,434 + +2.4 5,517,434 + +2.7 5,517,435 - -3.4 5,517,451 - -3.4 5,517,455 + -0.1 5,517,456 - +0.4 5,517,589 - PFLU_RS24645 0.11 -1.7 5,517,589 - PFLU_RS24645 0.11 -3.1 5,517,791 + PFLU_RS24645 0.29 -3.5 5,517,791 + PFLU_RS24645 0.29 -3.8 5,517,792 - PFLU_RS24645 0.29 -0.9 5,517,792 - PFLU_RS24645 0.29 -0.5 5,517,834 + PFLU_RS24645 0.33 -4.1 5,517,834 + PFLU_RS24645 0.33 -3.5 5,517,834 + PFLU_RS24645 0.33 -1.4 5,517,834 + PFLU_RS24645 0.33 -3.2 5,517,834 + PFLU_RS24645 0.33 -2.4 5,517,834 + PFLU_RS24645 0.33 -2.9 5,517,834 + PFLU_RS24645 0.33 -3.6 5,517,835 - PFLU_RS24645 0.33 -3.7 5,517,835 - PFLU_RS24645 0.33 -2.5 5,517,835 - PFLU_RS24645 0.33 -2.9 5,517,835 - PFLU_RS24645 0.33 -3.6 5,517,835 - PFLU_RS24645 0.33 -3.8 5,517,835 - PFLU_RS24645 0.33 -4.2 5,517,835 - PFLU_RS24645 0.33 -2.9 5,517,835 - PFLU_RS24645 0.33 -2.4 5,517,906 + PFLU_RS24645 0.40 -3.6 5,517,906 + PFLU_RS24645 0.40 -3.7 5,517,906 + PFLU_RS24645 0.40 -3.3 5,517,906 + PFLU_RS24645 0.40 -3.1 5,517,906 + PFLU_RS24645 0.40 -2.3 5,517,906 + PFLU_RS24645 0.40 -3.5 5,517,907 - PFLU_RS24645 0.40 -3.4 5,517,907 - PFLU_RS24645 0.40 -2.4 5,517,907 - PFLU_RS24645 0.40 -3.3 5,517,907 - PFLU_RS24645 0.40 -3.8 5,517,907 - PFLU_RS24645 0.40 -1.7 5,518,029 + PFLU_RS24645 0.51 -2.6 5,518,029 + PFLU_RS24645 0.51 -2.3 5,518,029 + PFLU_RS24645 0.51 -3.5 5,518,029 + PFLU_RS24645 0.51 -2.9 5,518,029 + PFLU_RS24645 0.51 -1.9 5,518,029 + PFLU_RS24645 0.51 -3.6 5,518,030 - PFLU_RS24645 0.51 -3.3 5,518,030 - PFLU_RS24645 0.51 -0.5 5,518,030 - PFLU_RS24645 0.51 -1.3 5,518,030 - PFLU_RS24645 0.51 -0.4 5,518,030 - PFLU_RS24645 0.51 -4.0 5,518,030 - PFLU_RS24645 0.51 -2.7 5,518,083 + PFLU_RS24645 0.56 -1.7 5,518,083 + PFLU_RS24645 0.56 -4.0 5,518,083 + PFLU_RS24645 0.56 -2.4 5,518,083 + PFLU_RS24645 0.56 -2.2 5,518,083 + PFLU_RS24645 0.56 -1.9 5,518,083 + PFLU_RS24645 0.56 -4.1 5,518,084 - PFLU_RS24645 0.56 -1.4 5,518,278 + PFLU_RS24645 0.73 -2.0 5,518,278 + PFLU_RS24645 0.73 -3.5 5,518,278 + PFLU_RS24645 0.73 -3.0 5,518,279 - PFLU_RS24645 0.73 -2.9 5,518,279 - PFLU_RS24645 0.73 -2.9 5,518,446 + PFLU_RS24645 0.88 -2.0 5,518,446 + PFLU_RS24645 0.88 -1.7 5,518,447 - PFLU_RS24645 0.88 -2.8 5,518,447 - PFLU_RS24645 0.88 -0.3
Or see this region's nucleotide sequence