Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22310

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
5,017,567	+				-0.1
5,017,567	+				-0.3
5,017,567	+				+0.1
5,017,568	-				-0.3
5,017,568	-				-0.3
5,017,568	-				+0.3
5,017,568	-				-1.2
5,017,568	-				+1.3
5,017,646	+				-0.7
5,017,646	+				-0.1
5,017,646	+				-0.1
5,017,646	+				+0.3
5,017,646	+				+0.3
5,017,646	+				+0.1
5,017,646	+				+0.0
5,017,647	-				-0.1
5,017,647	-				-1.0
5,017,647	-				+0.0
5,017,647	-				+0.7
5,017,648	+				-0.3
5,017,648	+				+0.6
5,017,649	-				-0.2
5,017,649	-				-0.6
5,017,649	-				+0.5
5,017,701	+				+0.8
5,017,702	-				-1.1
5,017,800	+		PFLU_RS22305	0.15	-0.1
5,017,820	+		PFLU_RS22305	0.18	-0.2
5,017,820	+		PFLU_RS22305	0.18	-0.8
5,017,820	+		PFLU_RS22305	0.18	+0.4
5,017,820	+		PFLU_RS22305	0.18	+0.3
5,017,820	+		PFLU_RS22305	0.18	+0.5
5,017,820	+		PFLU_RS22305	0.18	-0.2
5,017,820	+		PFLU_RS22305	0.18	-0.2
5,017,821	-		PFLU_RS22305	0.18	+0.6
5,017,821	-		PFLU_RS22305	0.18	+0.5
5,017,821	-		PFLU_RS22305	0.18	-0.5
5,017,821	-		PFLU_RS22305	0.18	-0.9
5,017,821	-		PFLU_RS22305	0.18	-0.1
5,017,821	-		PFLU_RS22305	0.18	-0.3
5,017,821	-		PFLU_RS22305	0.18	-0.1
5,017,821	-		PFLU_RS22305	0.18	+0.7
5,017,821	-		PFLU_RS22305	0.18	-0.1
5,017,821	-		PFLU_RS22305	0.18	-0.0
5,017,821	-		PFLU_RS22305	0.18	+0.9
5,017,821	-		PFLU_RS22305	0.18	-0.1
5,017,821	-		PFLU_RS22305	0.18	+0.2
5,017,836	+		PFLU_RS22305	0.20	-0.7
5,017,861	+		PFLU_RS22305	0.23	+0.0
5,017,862	-		PFLU_RS22305	0.23	-1.5
5,017,902	+		PFLU_RS22305	0.28	+0.3
5,017,902	+		PFLU_RS22305	0.28	-0.3
5,017,902	+		PFLU_RS22305	0.28	-0.6
5,017,903	-		PFLU_RS22305	0.28	+0.0
5,017,903	-		PFLU_RS22305	0.28	+0.8
5,017,903	-		PFLU_RS22305	0.28	+1.0
5,017,903	-		PFLU_RS22305	0.28	-0.1
5,017,903	-		PFLU_RS22305	0.28	-0.2
5,017,903	-		PFLU_RS22305	0.28	+1.4
5,017,962	+		PFLU_RS22305	0.36	+0.8
5,017,962	+		PFLU_RS22305	0.36	+0.9
5,017,962	+		PFLU_RS22305	0.36	-0.1
5,017,963	-		PFLU_RS22305	0.36	-0.1
5,017,963	-		PFLU_RS22305	0.36	+1.6
5,017,963	-		PFLU_RS22305	0.36	+0.8
5,017,963	-		PFLU_RS22305	0.36	+1.0
5,017,963	-		PFLU_RS22305	0.36	+0.2
5,017,963	-		PFLU_RS22305	0.36	+0.4
5,017,963	-		PFLU_RS22305	0.36	-0.5
5,017,963	-		PFLU_RS22305	0.36	+0.3
5,018,179	+		PFLU_RS22305	0.63	+0.3
5,018,180	-		PFLU_RS22305	0.63	+0.3
5,018,217	+		PFLU_RS22305	0.68	+0.3
5,018,217	+		PFLU_RS22305	0.68	-2.9
5,018,217	+		PFLU_RS22305	0.68	+0.6
5,018,217	+		PFLU_RS22305	0.68	-0.2
5,018,217	+		PFLU_RS22305	0.68	+1.2
5,018,221	+		PFLU_RS22305	0.68	+0.9
5,018,221	+		PFLU_RS22305	0.68	-1.1
5,018,221	+		PFLU_RS22305	0.68	-0.5
5,018,221	+		PFLU_RS22305	0.68	+0.8
5,018,221	+		PFLU_RS22305	0.68	-1.1
5,018,221	+		PFLU_RS22305	0.68	-0.0
5,018,221	+		PFLU_RS22305	0.68	+0.2
5,018,222	-		PFLU_RS22305	0.68	-0.8
5,018,222	-		PFLU_RS22305	0.68	-0.2
5,018,222	-		PFLU_RS22305	0.68	-0.2
5,018,222	-		PFLU_RS22305	0.68	+0.4
5,018,222	-		PFLU_RS22305	0.68	-0.5
5,018,222	-		PFLU_RS22305	0.68	-0.4
5,018,364	+		PFLU_RS22305	0.86	+1.1
5,018,447	+				+0.9
5,018,447	+				+0.3
5,018,447	+				+0.2
5,018,447	+				-1.9
5,018,448	-				-0.6
5,018,448	-				-0.0
5,018,493	+				-0.4
5,018,553	+				-0.4
5,018,553	+				+0.9
5,018,580	+				+0.6
5,018,580	+				-0.6
5,018,580	+				+0.5
5,018,580	+				-0.2
5,018,580	+				+0.5
5,018,581	-				+1.3
5,018,581	-				+0.1
5,018,638	+				-1.0
5,018,638	+				+0.2
5,018,638	+				+0.1
5,018,639	-				-1.2
5,018,639	-				+0.2
5,018,639	-				+0.6
5,018,639	-				+0.2
5,018,639	-				-0.3
5,018,639	-				-0.3
5,018,639	-				+0.5
5,018,748	+		PFLU_RS22310	0.13	-0.1
5,018,748	+		PFLU_RS22310	0.13	-0.0
5,018,748	+		PFLU_RS22310	0.13	-0.1
5,018,748	+		PFLU_RS22310	0.13	-0.2
5,018,748	+		PFLU_RS22310	0.13	+1.0
5,018,748	+		PFLU_RS22310	0.13	-0.4
5,018,748	+		PFLU_RS22310	0.13	+0.4
5,018,748	+		PFLU_RS22310	0.13	-1.6
5,018,748	+		PFLU_RS22310	0.13	+0.4
5,018,748	+		PFLU_RS22310	0.13	-0.0
5,018,748	+		PFLU_RS22310	0.13	+0.4
5,018,748	+		PFLU_RS22310	0.13	+0.6
5,018,748	+		PFLU_RS22310	0.13	+1.2
5,018,748	+		PFLU_RS22310	0.13	-0.0
5,018,748	+		PFLU_RS22310	0.13	+0.2
5,018,749	-		PFLU_RS22310	0.13	+0.1
5,018,749	-		PFLU_RS22310	0.13	+0.2
5,018,749	-		PFLU_RS22310	0.13	+0.7
5,018,749	-		PFLU_RS22310	0.13	-0.2
5,018,749	-		PFLU_RS22310	0.13	+0.6
5,018,749	-		PFLU_RS22310	0.13	-0.7
5,018,749	-		PFLU_RS22310	0.13	+0.2
5,018,749	-		PFLU_RS22310	0.13	+1.4
5,018,749	-		PFLU_RS22310	0.13	-0.7
5,018,749	-		PFLU_RS22310	0.13	+0.6
5,018,749	-		PFLU_RS22310	0.13	+0.5
5,018,749	-		PFLU_RS22310	0.13	-1.3
5,018,749	-		PFLU_RS22310	0.13	-0.7
5,018,821	+		PFLU_RS22310	0.18	-0.4
5,018,836	+		PFLU_RS22310	0.19	+0.2
5,018,836	+		PFLU_RS22310	0.19	-0.0
5,018,837	-		PFLU_RS22310	0.19	+0.1
5,018,837	-		PFLU_RS22310	0.19	+0.1
5,018,932	+		PFLU_RS22310	0.25	+0.9
5,018,932	+		PFLU_RS22310	0.25	-0.1
5,018,976	+		PFLU_RS22310	0.28	-0.0
5,018,977	-		PFLU_RS22310	0.28	-0.0
5,019,196	+		PFLU_RS22310	0.42	+0.0
5,019,196	+		PFLU_RS22310	0.42	-0.0
5,019,196	+		PFLU_RS22310	0.42	-1.9
5,019,196	+		PFLU_RS22310	0.42	+1.2
5,019,196	+		PFLU_RS22310	0.42	+0.5
5,019,196	+		PFLU_RS22310	0.42	+0.7
5,019,197	-		PFLU_RS22310	0.42	-0.1
5,019,197	-		PFLU_RS22310	0.42	+0.0
5,019,197	-		PFLU_RS22310	0.42	-0.6
5,019,261	+		PFLU_RS22310	0.46	-0.2
5,019,261	+		PFLU_RS22310	0.46	-0.6
5,019,262	+		PFLU_RS22310	0.46	+0.5
5,019,262	-		PFLU_RS22310	0.46	+1.0
5,019,262	-		PFLU_RS22310	0.46	+1.2
5,019,262	-		PFLU_RS22310	0.46	+0.4
5,019,262	-		PFLU_RS22310	0.46	+0.4
5,019,262	-		PFLU_RS22310	0.46	+0.3
5,019,262	-		PFLU_RS22310	0.46	+0.7
5,019,262	-		PFLU_RS22310	0.46	+0.6
5,019,339	+		PFLU_RS22310	0.51	+1.3
5,019,909	+		PFLU_RS22310	0.87	+0.1
5,019,910	-		PFLU_RS22310	0.87	+0.2
5,019,910	-		PFLU_RS22310	0.87	-0.0
5,019,981	+				-0.3
5,019,982	-				-1.2
5,020,065	+				-0.1
5,020,102	-				-1.2
5,020,108	+				+0.1
5,020,109	-				+0.6
5,020,112	+				-0.2
5,020,112	+				-0.2
5,020,112	+				-0.1
5,020,112	+				-0.7
5,020,112	+				-1.1
5,020,112	+				-0.1
5,020,112	+				-0.3
5,020,112	+				-0.6
5,020,112	+				-0.2
5,020,112	+				+0.7
5,020,113	-				+0.7
5,020,113	-				-0.9
5,020,113	-				+0.6
5,020,113	-				+0.6
5,020,113	-				+0.3
5,020,113	-				-1.0
5,020,113	-				+0.3
5,020,113	-				-0.2
5,020,113	-				+0.0
5,020,113	-				-0.1
5,020,113	-				+0.4
5,020,113	-				-0.1
5,020,113	-				+0.6
5,020,174	+				-1.0
5,020,174	+				-1.8
5,020,174	+				+1.1
5,020,175	-				-0.1
5,020,289	+		PFLU_RS22315	0.20	-0.1
5,020,296	+		PFLU_RS22315	0.21	-0.1
5,020,296	+		PFLU_RS22315	0.21	-0.5
5,020,297	-		PFLU_RS22315	0.21	+0.1
5,020,413	+		PFLU_RS22315	0.38	+0.5
5,020,413	+		PFLU_RS22315	0.38	-0.6
5,020,413	+		PFLU_RS22315	0.38	+0.2
5,020,413	+		PFLU_RS22315	0.38	+0.2
5,020,413	+		PFLU_RS22315	0.38	+1.0
5,020,413	+		PFLU_RS22315	0.38	+1.9
5,020,414	-		PFLU_RS22315	0.38	-0.4
5,020,414	-		PFLU_RS22315	0.38	+0.4
5,020,414	-		PFLU_RS22315	0.38	+0.3
5,020,414	-		PFLU_RS22315	0.38	-0.4
5,020,414	-		PFLU_RS22315	0.38	+0.2
5,020,414	-		PFLU_RS22315	0.38	-0.0
5,020,451	+		PFLU_RS22315	0.43	+0.2
5,020,452	-		PFLU_RS22315	0.43	-0.5
5,020,466	+		PFLU_RS22315	0.45	-0.2
5,020,542	+		PFLU_RS22315	0.56	-1.2
5,020,542	+		PFLU_RS22315	0.56	+0.6
5,020,542	+		PFLU_RS22315	0.56	-0.7
5,020,542	+		PFLU_RS22315	0.56	+0.9
5,020,542	+		PFLU_RS22315	0.56	+0.5
5,020,542	+		PFLU_RS22315	0.56	-0.3
5,020,542	+		PFLU_RS22315	0.56	+0.6
5,020,543	-		PFLU_RS22315	0.56	+0.1
5,020,543	-		PFLU_RS22315	0.56	+1.0
5,020,543	-		PFLU_RS22315	0.56	-0.1
5,020,623	+		PFLU_RS22315	0.68	+0.7
5,020,623	+		PFLU_RS22315	0.68	-0.1
5,020,623	+		PFLU_RS22315	0.68	+1.1
5,020,623	+		PFLU_RS22315	0.68	-0.6
5,020,624	-		PFLU_RS22315	0.68	-1.2
5,020,624	-		PFLU_RS22315	0.68	+0.3
5,020,624	-		PFLU_RS22315	0.68	+0.4
5,020,624	-		PFLU_RS22315	0.68	+1.2
5,020,624	-		PFLU_RS22315	0.68	+0.1
5,020,862	+				+0.1
5,020,871	+				-0.1
5,020,871	+				-0.4
5,020,871	+				-1.8
5,020,871	+				-2.5
5,020,871	+				-0.5
5,020,872	-				+0.2
5,020,872	-				+1.0
5,020,873	+				+0.9
5,020,873	+				+0.1
5,020,873	+				-0.4
5,020,873	+				+0.3
5,020,874	-				-1.1
5,020,874	-				+0.2
5,020,874	-				-0.6
5,020,934	+				-0.0
5,020,934	+				+0.9
5,020,935	-				-1.0
5,020,935	-				-0.8
5,020,935	-				+0.3
5,020,939	+				+0.6
5,020,939	+				+0.6
5,020,939	+				+0.4
5,020,939	+				+1.2
5,020,939	+				-0.8
5,020,939	+				+0.5
5,020,939	+				+0.8
5,020,939	+				+0.5
5,020,939	+				+0.9
5,020,939	+				-0.3
5,020,939	+				+0.0
5,020,939	+				+0.3
5,020,939	+				-0.5
5,020,940	-				+0.4
5,020,940	-				-2.8
5,020,940	-				+0.1
5,020,940	-				+1.7
5,020,940	-				+0.3
5,020,940	-				-0.1
5,020,940	-				+0.3
5,020,940	-				-0.7
5,020,950	+				-0.4
5,020,950	+				+0.3
5,020,950	+				-0.7
5,020,950	+				-0.7
5,020,951	-				-0.9
5,020,951	-				-0.4
5,020,951	-				+0.3
5,020,951	-				+0.1
5,020,951	-				+0.3
5,020,951	-				-0.0
5,020,951	-				-0.3
5,020,952	+				+1.0
5,020,952	+				+0.1
5,020,952	+				-0.2
5,020,953	-				+0.3
5,020,953	-				+0.3
5,020,953	-				-1.4
5,020,956	+				-1.0
5,020,956	+				-1.0
5,020,956	+				-0.0
5,020,956	+				+0.7
5,020,956	+				-0.4
5,020,956	+				+0.0
5,020,956	+				+0.4
5,020,957	-				-0.2
5,020,957	-				+0.1
5,020,957	-				-0.3
5,020,957	-				+0.3
5,020,957	-				+0.4
5,020,957	-				-0.8
5,020,957	-				+0.4
5,020,957	-				-0.1
5,020,957	-				-1.1
5,020,957	-				+0.7
5,020,957	-				+0.4
5,020,957	-				-1.1
5,020,957	-				-0.1
5,020,957	-				-0.0
5,020,957	-				-0.9
5,020,982	+				+0.3
5,020,982	+				-0.3
5,020,982	+				+0.5
5,020,983	-				+0.1