Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS14725

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,289,287	-		PFLU_RS14715	0.57	+1.3
3,289,299	-		PFLU_RS14715	0.59	+1.2
3,289,299	-		PFLU_RS14715	0.59	+3.2
3,289,299	-		PFLU_RS14715	0.59	+1.5
3,289,338	-		PFLU_RS14715	0.64	+1.3
3,289,338	-		PFLU_RS14715	0.64	+1.6
3,289,338	-		PFLU_RS14715	0.64	+1.5
3,289,338	-		PFLU_RS14715	0.64	+0.4
3,289,338	-		PFLU_RS14715	0.64	+3.3
3,289,338	-		PFLU_RS14715	0.64	+1.1
3,289,629	+				-0.0
3,289,630	-				+0.4
3,289,630	-				-0.7
3,289,670	+				-0.4
3,289,670	+				+0.5
3,289,670	+				+0.6
3,289,671	-				-1.2
3,289,671	-				-0.2
3,289,671	-				-0.3
3,289,678	-				-0.6
3,289,706	+		PFLU_RS14720	0.13	-0.0
3,289,721	+		PFLU_RS14720	0.15	-0.2
3,289,722	-		PFLU_RS14720	0.15	-1.0
3,289,724	+		PFLU_RS14720	0.16	-1.0
3,289,724	+		PFLU_RS14720	0.16	+1.2
3,289,724	+		PFLU_RS14720	0.16	-1.2
3,289,724	+		PFLU_RS14720	0.16	+1.4
3,289,725	-		PFLU_RS14720	0.16	-0.8
3,289,725	-		PFLU_RS14720	0.16	-1.8
3,289,725	-		PFLU_RS14720	0.16	-0.9
3,289,725	-		PFLU_RS14720	0.16	+0.2
3,289,725	-		PFLU_RS14720	0.16	-0.2
3,289,725	-		PFLU_RS14720	0.16	+0.3
3,289,758	+		PFLU_RS14720	0.21	-0.8
3,289,802	+		PFLU_RS14720	0.28	-0.4
3,289,882	+		PFLU_RS14720	0.42	+0.1
3,289,883	-		PFLU_RS14720	0.42	+0.1
3,289,883	-		PFLU_RS14720	0.42	-0.5
3,290,009	-		PFLU_RS14720	0.63	-0.7
3,290,074	+		PFLU_RS14720	0.73	-0.1
3,290,075	-		PFLU_RS14720	0.73	-0.2
3,290,221	+				-0.5
3,290,222	-				-0.7
3,290,222	-				-1.1
3,290,233	+				-0.5
3,290,233	+				-0.5
3,290,233	+				-0.3
3,290,233	+				-0.2
3,290,233	+				-0.2
3,290,233	+				+0.6
3,290,233	+				-1.4
3,290,234	-				-1.0
3,290,234	-				-0.8
3,290,234	-				+1.6
3,290,234	-				-0.7
3,290,234	-				-1.5
3,290,234	-				-0.6
3,290,234	-				-0.5
3,290,234	-				-1.6
3,290,234	-				-0.3
3,290,234	-				-0.5
3,290,234	-				-0.2
3,290,234	-				-0.7
3,290,237	+				+0.6
3,290,237	+				+0.5
3,290,237	+				-0.2
3,290,237	+				-0.6
3,290,237	+				-0.0
3,290,237	+				-0.3
3,290,238	-				-1.5
3,290,238	-				-0.1
3,290,238	-				-0.7
3,290,238	-				+0.3
3,290,238	-				-1.4
3,290,238	-				-0.8
3,290,238	-				-0.8
3,290,238	-				-1.5
3,290,238	-				+0.0
3,290,511	+		PFLU_RS14725	0.24	+0.2
3,290,511	+		PFLU_RS14725	0.24	-0.3
3,290,511	+		PFLU_RS14725	0.24	-1.0
3,290,511	+		PFLU_RS14725	0.24	-1.0
3,290,512	-		PFLU_RS14725	0.24	+0.1
3,290,527	-		PFLU_RS14725	0.25	-0.5
3,290,611	-		PFLU_RS14725	0.32	+0.2
3,290,725	+		PFLU_RS14725	0.42	-0.9
3,290,725	+		PFLU_RS14725	0.42	-1.0
3,290,725	+		PFLU_RS14725	0.42	-1.5
3,290,725	+		PFLU_RS14725	0.42	+0.6
3,290,725	+		PFLU_RS14725	0.42	-0.3
3,290,726	-		PFLU_RS14725	0.42	+1.6
3,290,726	-		PFLU_RS14725	0.42	-0.0
3,290,729	+		PFLU_RS14725	0.42	+0.1
3,290,729	+		PFLU_RS14725	0.42	-0.9
3,290,729	+		PFLU_RS14725	0.42	-0.5
3,290,729	+		PFLU_RS14725	0.42	-0.3
3,290,730	-		PFLU_RS14725	0.42	-1.1
3,290,771	+		PFLU_RS14725	0.45	-2.2
3,290,868	-		PFLU_RS14725	0.54	-2.0
3,291,008	-		PFLU_RS14725	0.65	-0.3
3,291,081	-		PFLU_RS14725	0.71	-0.9
3,291,081	-		PFLU_RS14725	0.71	-3.2
3,291,081	-		PFLU_RS14725	0.71	-0.3
3,291,081	-		PFLU_RS14725	0.71	-1.2
3,291,081	-		PFLU_RS14725	0.71	+0.3
3,291,174	+		PFLU_RS14725	0.79	-2.0
3,291,249	-		PFLU_RS14725	0.85	-0.9
3,291,249	-		PFLU_RS14725	0.85	+0.6
3,291,314	+				-0.8
3,291,371	-				-0.4
3,291,469	+				-0.1
3,291,469	+				+0.3
3,291,470	-				-0.5
3,291,555	+		PFLU_RS14730	0.14	+0.5
3,291,555	+		PFLU_RS14730	0.14	-0.6
3,291,555	+		PFLU_RS14730	0.14	+0.2
3,291,555	+		PFLU_RS14730	0.14	+1.0
3,291,555	+		PFLU_RS14730	0.14	-0.1
3,291,555	+		PFLU_RS14730	0.14	+0.4
3,291,574	+		PFLU_RS14730	0.19	+0.2
3,291,574	+		PFLU_RS14730	0.19	-1.4
3,291,726	+		PFLU_RS14730	0.59	-0.8
3,291,726	+		PFLU_RS14730	0.59	+0.1
3,291,726	+		PFLU_RS14730	0.59	+0.5
3,291,727	-		PFLU_RS14730	0.60	+0.5
3,291,727	-		PFLU_RS14730	0.60	+0.9
3,291,732	-		PFLU_RS14730	0.61	+0.2
3,291,843	+				-0.8
3,291,843	+				-0.5
3,291,858	+				-2.5
3,291,858	+				+0.4
3,291,858	+				+0.4
3,291,858	+				+0.3
3,291,859	-				+0.9
3,291,877	+				+0.4
3,291,877	+				+0.5
3,291,877	+				+0.6
3,291,984	+				+0.5
3,291,984	+				+0.5
3,291,984	+				+0.9
3,291,985	-				-0.3
3,292,008	+				+0.7
3,292,008	+				+0.8
3,292,009	-				-0.3
3,292,078	+				+0.0
3,292,079	-				-2.2
3,292,093	+				+0.5
3,292,114	+				-0.1
3,292,114	+				+1.1
3,292,114	+				-0.0
3,292,115	-				-0.1
3,292,115	-				+0.5
3,292,115	-				-0.6
3,292,115	-				+0.5
3,292,115	-				+0.1
3,292,115	-				-1.1
3,292,117	-				-0.3
3,292,117	-				+0.0
3,292,117	-				+0.4
3,292,117	-				+0.8
3,292,212	+				-0.7
3,292,242	-				+0.5
3,292,242	-				+1.2
3,292,303	+				+0.2
3,292,322	+				+0.2
3,292,322	+				+0.8
3,292,322	+				-0.1
3,292,322	+				-0.2
3,292,322	+				-0.8
3,292,323	-				-0.2
3,292,323	-				+0.8
3,292,323	-				+0.1
3,292,323	-				+0.3
3,292,323	-				-0.0
3,292,323	-				-0.7
3,292,323	-				+0.1
3,292,323	-				-0.4
3,292,335	+				-0.2
3,292,335	+				+0.1
3,292,336	-				+0.5
3,292,336	-				+0.6
3,292,402	+				-1.2
3,292,403	-				-0.3
3,292,403	-				+0.7
3,292,403	-				-0.3
3,292,403	-				+0.4
3,292,403	-				-0.3
3,292,418	-		PFLU_RS14735	0.10	-0.2