Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS05435

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
1,212,163	-				-0.7
1,212,175	+				-0.5
1,212,176	-				+0.3
1,212,176	-				+0.3
1,212,347	+				+0.6
1,212,347	+				-0.6
1,212,347	+				-0.3
1,212,347	+				-0.6
1,212,347	+				-0.8
1,212,348	-				-0.4
1,212,348	-				-0.8
1,212,348	-				-0.1
1,212,350	+				+1.2
1,212,380	-				-0.6
1,212,391	-				-0.1
1,212,534	-		PFLU_RS05430	0.22	+0.8
1,212,594	+		PFLU_RS05430	0.30	-0.9
1,212,594	+		PFLU_RS05430	0.30	-0.8
1,212,595	-		PFLU_RS05430	0.30	-0.8
1,212,698	+		PFLU_RS05430	0.43	-0.6
1,212,699	-		PFLU_RS05430	0.43	+0.0
1,212,782	+		PFLU_RS05430	0.54	-1.2
1,212,783	-		PFLU_RS05430	0.54	+0.7
1,212,783	-		PFLU_RS05430	0.54	-2.4
1,212,869	+		PFLU_RS05430	0.66	-0.2
1,212,869	+		PFLU_RS05430	0.66	+0.3
1,212,869	+		PFLU_RS05430	0.66	+0.8
1,212,869	+		PFLU_RS05430	0.66	+0.1
1,212,869	+		PFLU_RS05430	0.66	-0.4
1,212,869	+		PFLU_RS05430	0.66	-0.5
1,212,869	+		PFLU_RS05430	0.66	-0.3
1,212,869	+		PFLU_RS05430	0.66	-0.3
1,212,870	-		PFLU_RS05430	0.66	+0.1
1,212,870	-		PFLU_RS05430	0.66	-0.9
1,212,870	-		PFLU_RS05430	0.66	+0.4
1,212,870	-		PFLU_RS05430	0.66	-0.8
1,212,870	-		PFLU_RS05430	0.66	+0.3
1,212,870	-		PFLU_RS05430	0.66	-0.4
1,212,870	-		PFLU_RS05430	0.66	+0.2
1,212,886	+		PFLU_RS05430	0.68	+0.0
1,212,887	-		PFLU_RS05430	0.68	+0.9
1,212,893	+		PFLU_RS05430	0.69	-0.7
1,212,893	+		PFLU_RS05430	0.69	-1.9
1,212,893	+		PFLU_RS05430	0.69	-0.1
1,212,894	-		PFLU_RS05430	0.69	+0.2
1,212,896	+		PFLU_RS05430	0.69	+0.4
1,212,896	+		PFLU_RS05430	0.69	-0.6
1,212,896	+		PFLU_RS05430	0.69	+0.6
1,212,896	+		PFLU_RS05430	0.69	-0.3
1,212,896	+		PFLU_RS05430	0.69	+0.8
1,212,896	+		PFLU_RS05430	0.69	-0.1
1,212,896	+		PFLU_RS05430	0.69	-0.2
1,212,896	+		PFLU_RS05430	0.69	+1.1
1,212,896	+		PFLU_RS05430	0.69	-2.2
1,212,896	+		PFLU_RS05430	0.69	+0.4
1,212,896	+		PFLU_RS05430	0.69	+0.8
1,212,897	-		PFLU_RS05430	0.69	+0.5
1,212,897	-		PFLU_RS05430	0.69	+0.3
1,212,897	-		PFLU_RS05430	0.69	+0.6
1,212,897	-		PFLU_RS05430	0.69	+0.3
1,212,897	-		PFLU_RS05430	0.69	-1.0
1,212,897	-		PFLU_RS05430	0.69	+0.1
1,212,897	-		PFLU_RS05430	0.69	-1.5
1,212,934	+		PFLU_RS05430	0.74	+0.3
1,212,935	-		PFLU_RS05430	0.74	+0.6
1,213,025	+		PFLU_RS05430	0.86	+0.5
1,213,025	+		PFLU_RS05430	0.86	+0.1
1,213,025	+		PFLU_RS05430	0.86	-0.7
1,213,025	+		PFLU_RS05430	0.86	+0.4
1,213,026	-		PFLU_RS05430	0.86	+0.5
1,213,026	-		PFLU_RS05430	0.86	+0.4
1,213,026	-		PFLU_RS05430	0.86	+0.6
1,213,026	-		PFLU_RS05430	0.86	+0.8
1,213,034	+		PFLU_RS05430	0.87	-0.2
1,213,034	+		PFLU_RS05430	0.87	+0.4
1,213,035	-		PFLU_RS05430	0.88	-1.2
1,213,035	-		PFLU_RS05430	0.88	+0.1
1,213,035	-		PFLU_RS05430	0.88	+0.3
1,213,035	-		PFLU_RS05430	0.88	+0.2
1,213,047	-		PFLU_RS05430	0.89	+0.9
1,213,165	+				-0.6
1,213,165	+				-0.0
1,213,165	+				-0.5
1,213,165	+				-0.4
1,213,165	+				+1.8
1,213,165	+				-0.1
1,213,165	+				-0.8
1,213,165	+				-0.5
1,213,165	+				+0.8
1,213,165	+				-0.3
1,213,165	+				+0.4
1,213,165	+				-0.9
1,213,165	+				+0.6
1,213,166	-				-1.6
1,213,166	-				+0.4
1,213,166	-				+0.9
1,213,166	-				+0.6
1,213,166	-				-0.2
1,213,166	-				+0.3
1,213,166	-				+0.5
1,213,166	-				+0.4
1,213,167	+				+1.5
1,213,167	+				+0.3
1,213,168	-				-0.6
1,213,168	-				-0.9
1,213,189	-				+0.1
1,213,189	-				+0.1
1,213,189	-				+0.1
1,213,255	+		PFLU_RS05435	0.18	+0.3
1,213,584	+		PFLU_RS05435	0.75	-1.2
1,213,584	+		PFLU_RS05435	0.75	+0.5
1,213,584	+		PFLU_RS05435	0.75	-0.1
1,213,584	+		PFLU_RS05435	0.75	-0.2
1,213,584	+		PFLU_RS05435	0.75	+0.7
1,213,584	+		PFLU_RS05435	0.75	-1.1
1,213,584	+		PFLU_RS05435	0.75	+0.1
1,213,584	+		PFLU_RS05435	0.75	-1.2
1,213,584	+		PFLU_RS05435	0.75	-0.8
1,213,584	+		PFLU_RS05435	0.75	-0.7
1,213,584	+		PFLU_RS05435	0.75	-0.0
1,213,584	+		PFLU_RS05435	0.75	-0.1
1,213,585	-		PFLU_RS05435	0.75	-0.5
1,213,585	-		PFLU_RS05435	0.75	-1.0
1,213,585	-		PFLU_RS05435	0.75	+0.9
1,213,585	-		PFLU_RS05435	0.75	+0.5
1,213,630	+		PFLU_RS05435	0.83	+1.1
1,213,630	+		PFLU_RS05435	0.83	-0.3
1,213,630	+		PFLU_RS05435	0.83	-0.7
1,213,630	+		PFLU_RS05435	0.83	+0.5
1,213,630	+		PFLU_RS05435	0.83	-0.0
1,213,631	-		PFLU_RS05435	0.83	-2.3
1,213,631	-		PFLU_RS05435	0.83	+1.1
1,213,631	-		PFLU_RS05435	0.83	-1.1
1,213,721	+				-0.4
1,213,721	+				-1.1
1,213,721	+				+0.8
1,213,721	+				+0.9
1,213,721	+				+0.6
1,213,721	+				-0.7
1,213,722	-				+0.1
1,213,722	-				-0.3
1,213,722	-				-0.9
1,213,745	+				+0.0
1,213,745	+				-0.2
1,213,745	+				+0.6
1,213,884	-		PFLU_RS05440	0.29	-0.2
1,213,941	+		PFLU_RS05440	0.41	+0.1
1,213,941	+		PFLU_RS05440	0.41	+0.5
1,213,941	+		PFLU_RS05440	0.41	-0.0
1,213,942	-		PFLU_RS05440	0.41	-1.1
1,213,942	-		PFLU_RS05440	0.41	-0.3
1,213,959	+		PFLU_RS05440	0.44	-0.2
1,213,960	-		PFLU_RS05440	0.44	+0.5
1,213,961	+		PFLU_RS05440	0.45	+0.5
1,213,962	-		PFLU_RS05440	0.45	+0.0
1,214,072	-		PFLU_RS05440	0.67	+0.8
1,214,123	+		PFLU_RS05440	0.77	+0.0
1,214,124	-		PFLU_RS05440	0.78	+0.1
1,214,124	-		PFLU_RS05440	0.78	+0.0
1,214,364	+		PFLU_RS05445	0.24	+1.0
1,214,449	+		PFLU_RS05445	0.42	+0.2
1,214,457	+		PFLU_RS05445	0.44	+1.1
1,214,457	+		PFLU_RS05445	0.44	+0.3
1,214,457	+		PFLU_RS05445	0.44	-0.9
1,214,458	-		PFLU_RS05445	0.44	+0.3
1,214,458	-		PFLU_RS05445	0.44	-0.7
1,214,521	+		PFLU_RS05445	0.57	+0.0
1,214,521	+		PFLU_RS05445	0.57	-0.2
1,214,601	+		PFLU_RS05445	0.74	+0.6
1,214,601	+		PFLU_RS05445	0.74	+0.6
1,214,601	+		PFLU_RS05445	0.74	-0.3
1,214,602	-		PFLU_RS05445	0.74	-1.1
1,214,720	-				+0.9
1,214,725	+				+0.2
1,214,726	-				-0.2
1,214,726	-				+0.3