Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS05235

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
1,165,367	-				-1.1
1,165,367	-				-0.1
1,165,375	+				-0.1
1,165,661	+		PFLU_RS05225	0.78	+0.1
1,165,661	+		PFLU_RS05225	0.78	+0.4
1,165,722	+				-0.6
1,165,747	+				+0.5
1,165,748	-				+0.4
1,165,762	+				+0.3
1,165,958	-		PFLU_RS05230	0.48	-0.2
1,165,958	-		PFLU_RS05230	0.48	-0.1
1,165,958	-		PFLU_RS05230	0.48	+0.2
1,165,958	-		PFLU_RS05230	0.48	+0.1
1,166,072	+		PFLU_RS05230	0.75	+0.1
1,166,072	+		PFLU_RS05230	0.75	-0.1
1,166,072	+		PFLU_RS05230	0.75	+2.0
1,166,072	+		PFLU_RS05230	0.75	+0.8
1,166,073	-		PFLU_RS05230	0.75	+0.9
1,166,073	-		PFLU_RS05230	0.75	-0.6
1,166,073	-		PFLU_RS05230	0.75	+1.0
1,166,073	-		PFLU_RS05230	0.75	-0.5
1,166,155	+				+0.0
1,166,155	+				+0.5
1,166,155	+				-2.8
1,166,155	+				+1.0
1,166,155	+				-0.2
1,166,155	+				+1.3
1,166,155	+				-0.0
1,166,155	+				+0.6
1,166,155	+				-1.2
1,166,155	+				-0.9
1,166,155	+				+0.3
1,166,155	+				-1.9
1,166,155	+				+2.0
1,166,155	+				+0.3
1,166,155	+				-1.1
1,166,155	+				-1.0
1,166,155	+				+0.8
1,166,155	+				+0.1
1,166,156	-				+1.0
1,166,156	-				-0.5
1,166,156	-				+1.0
1,166,156	-				-1.2
1,166,156	-				-0.4
1,166,156	-				+0.2
1,166,156	-				-0.0
1,166,156	-				-1.0
1,166,156	-				-0.1
1,166,156	-				-0.9
1,166,156	-				+1.0
1,166,156	-				+0.1
1,166,156	-				-0.9
1,166,156	-				+0.1
1,166,156	-				-0.2
1,166,156	-				+0.1
1,166,156	-				-1.0
1,166,156	-				+0.4
1,166,157	+				+0.8
1,166,157	+				+0.3
1,166,157	+				-1.1
1,166,157	+				+0.3
1,166,157	+				+0.9
1,166,157	+				+0.1
1,166,157	+				-1.1
1,166,157	+				+0.3
1,166,157	+				-0.4
1,166,157	+				-1.0
1,166,157	+				-0.5
1,166,157	+				+0.7
1,166,157	+				-0.2
1,166,157	+				-1.1
1,166,157	+				+1.3
1,166,157	+				-0.9
1,166,157	+				-0.3
1,166,157	+				-0.9
1,166,158	-				-0.5
1,166,158	-				+0.9
1,166,158	-				-0.4
1,166,158	-				+0.1
1,166,158	-				+0.7
1,166,158	-				-1.0
1,166,158	-				+0.0
1,166,158	-				-0.7
1,166,158	-				+0.7
1,166,158	-				-0.2
1,166,158	-				-1.0
1,166,158	-				-0.2
1,166,158	-				-0.6
1,166,158	-				+1.2
1,166,158	-				+0.2
1,166,158	-				-0.6
1,166,158	-				-1.0
1,166,158	-				-0.3
1,166,158	-				+0.4
1,166,158	-				-1.3
1,166,158	-				-0.8
1,166,158	-				-1.0
1,166,159	+				-1.0
1,166,159	+				+0.2
1,166,159	+				-0.9
1,166,159	+				-0.6
1,166,159	+				-0.3
1,166,159	+				-0.3
1,166,159	+				-1.0
1,166,160	-				+0.1
1,166,160	-				-0.8
1,166,160	-				+0.1
1,166,160	-				-0.1
1,166,160	-				+0.6
1,166,160	-				-1.7
1,166,160	-				+0.6
1,166,160	-				-0.5
1,166,160	-				+0.9
1,166,160	-				+0.9
1,166,160	-				+0.8
1,166,160	-				+0.9
1,166,160	-				+0.3
1,166,160	-				-0.5
1,166,160	-				+0.3
1,166,207	+				-1.4
1,166,207	+				+0.5
1,166,208	-				+0.7
1,166,362	+				-1.7
1,166,362	+				-1.9
1,166,746	+		PFLU_RS05235	0.27	-2.0
1,166,746	+		PFLU_RS05235	0.27	-0.9
1,166,747	-		PFLU_RS05235	0.27	-1.6
1,166,965	+		PFLU_RS05235	0.42	-1.9
1,166,965	+		PFLU_RS05235	0.42	-2.7
1,166,965	+		PFLU_RS05235	0.42	-2.5
1,167,047	-		PFLU_RS05235	0.48	-2.5
1,167,047	-		PFLU_RS05235	0.48	-2.6
1,167,065	+		PFLU_RS05235	0.49	-1.6
1,167,076	+		PFLU_RS05235	0.50	+0.1
1,167,076	+		PFLU_RS05235	0.50	-1.9
1,167,076	+		PFLU_RS05235	0.50	-0.4
1,167,076	+		PFLU_RS05235	0.50	-1.8
1,167,076	+		PFLU_RS05235	0.50	-1.3
1,167,076	+		PFLU_RS05235	0.50	-0.9
1,167,076	+		PFLU_RS05235	0.50	-1.3
1,167,076	+		PFLU_RS05235	0.50	-2.6
1,167,076	+		PFLU_RS05235	0.50	-2.1
1,167,076	+		PFLU_RS05235	0.50	-0.7
1,167,077	-		PFLU_RS05235	0.50	-3.2
1,167,077	-		PFLU_RS05235	0.50	-0.3
1,167,077	-		PFLU_RS05235	0.50	-1.4
1,167,077	-		PFLU_RS05235	0.50	-1.0
1,167,077	-		PFLU_RS05235	0.50	-2.7
1,167,077	-		PFLU_RS05235	0.50	+0.2
1,167,077	-		PFLU_RS05235	0.50	-1.0
1,167,077	-		PFLU_RS05235	0.50	-2.2
1,167,127	+		PFLU_RS05235	0.53	-0.5
1,167,127	+		PFLU_RS05235	0.53	-3.3
1,167,127	+		PFLU_RS05235	0.53	-2.9
1,167,127	+		PFLU_RS05235	0.53	-2.1
1,167,128	-		PFLU_RS05235	0.53	-0.5
1,167,128	-		PFLU_RS05235	0.53	-1.3
1,167,128	-		PFLU_RS05235	0.53	-1.9
1,167,128	-		PFLU_RS05235	0.53	+0.4
1,167,414	-		PFLU_RS05235	0.72	-1.8
1,167,414	-		PFLU_RS05235	0.72	-3.5
1,167,415	+		PFLU_RS05235	0.72	-1.4
1,167,461	-		PFLU_RS05235	0.75	+0.1
1,167,461	-		PFLU_RS05235	0.75	+0.5
1,167,477	+		PFLU_RS05235	0.76	-1.8
1,167,477	+		PFLU_RS05235	0.76	-1.8
1,167,477	+		PFLU_RS05235	0.76	-0.1
1,167,477	+		PFLU_RS05235	0.76	-2.4
1,167,478	-		PFLU_RS05235	0.77	-3.0
1,167,813	+				-1.6
1,167,840	+				-1.2
1,167,840	+				-0.6
1,167,840	+				-1.3
1,167,840	+				+0.5
1,167,840	+				-1.3
1,167,840	+				-0.2
1,167,840	+				-0.8
1,167,841	-				+0.2
1,167,841	-				+0.4
1,167,841	-				+0.2
1,167,841	-				+0.4
1,167,842	+				-0.9
1,167,842	+				-0.4
1,167,842	+				-2.3
1,167,843	-				-0.7
1,167,843	-				-0.8
1,167,843	-				-0.8
1,167,843	-				-1.7
1,167,843	-				+0.5
1,167,843	-				-1.1
1,167,843	-				-0.1
1,167,843	-				-0.7
1,167,843	-				-0.4
1,167,853	+				-1.0
1,167,867	+				-0.7
1,167,867	+				+0.7
1,167,879	-				-3.3
1,167,879	-				+0.2
1,167,881	+				-3.0
1,167,882	-				-0.7
1,167,882	-				+0.1
1,167,882	-				+0.6
1,167,896	+				+1.0
1,167,896	+				-2.1
1,167,896	+				-0.6
1,167,897	-				-0.4