Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02995 and PFLU_RS03000 overlap by 4 nucleotides PFLU_RS03000 and PFLU_RS31385 are separated by 70 nucleotides PFLU_RS31385 and PFLU_RS03005 are separated by 31 nucleotides PFLU_RS03005 and PFLU_RS03010 are separated by 114 nucleotides
PFLU_RS02995: PFLU_RS02995 - hypothetical protein, at 689,181 to 689,960
_RS02995
PFLU_RS03000: PFLU_RS03000 - MarC family protein, at 689,957 to 690,553
_RS03000
PFLU_RS31385: PFLU_RS31385 - LysR family transcriptional regulator, at 690,624 to 690,779
_RS31385
PFLU_RS03005: PFLU_RS03005 - hybrid sensor histidine kinase/response regulator, at 690,811 to 693,582
_RS03005
PFLU_RS03010: PFLU_RS03010 - phosphoribosylamine--glycine ligase, at 693,697 to 694,989
_RS03010
Position (kb) 690
691
692
693
694 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 689.959 kb on - strand at 690.067 kb on + strand, within PFLU_RS03000 at 690.090 kb on + strand, within PFLU_RS03000 at 690.090 kb on + strand, within PFLU_RS03000 at 690.091 kb on - strand, within PFLU_RS03000 at 690.091 kb on - strand, within PFLU_RS03000 at 690.091 kb on - strand, within PFLU_RS03000 at 690.091 kb on - strand, within PFLU_RS03000 at 690.091 kb on - strand, within PFLU_RS03000 at 690.170 kb on + strand, within PFLU_RS03000 at 690.171 kb on - strand, within PFLU_RS03000 at 690.171 kb on - strand, within PFLU_RS03000 at 690.388 kb on - strand, within PFLU_RS03000 at 690.478 kb on + strand, within PFLU_RS03000 at 690.507 kb on + strand at 690.507 kb on + strand at 690.507 kb on + strand at 690.508 kb on - strand at 690.591 kb on + strand at 690.591 kb on + strand at 690.591 kb on + strand at 690.592 kb on - strand at 690.592 kb on - strand at 690.781 kb on + strand at 690.781 kb on + strand at 690.781 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.783 kb on + strand at 690.784 kb on - strand at 690.784 kb on - strand at 690.784 kb on - strand at 690.784 kb on - strand at 690.784 kb on - strand at 690.784 kb on - strand at 690.784 kb on - strand at 690.784 kb on - strand at 690.940 kb on - strand at 691.070 kb on - strand at 691.070 kb on - strand at 692.086 kb on - strand, within PFLU_RS03005 at 692.086 kb on - strand, within PFLU_RS03005 at 692.276 kb on + strand, within PFLU_RS03005 at 692.276 kb on + strand, within PFLU_RS03005 at 692.276 kb on + strand, within PFLU_RS03005 at 692.277 kb on - strand, within PFLU_RS03005 at 692.277 kb on - strand, within PFLU_RS03005 at 692.353 kb on + strand, within PFLU_RS03005 at 692.353 kb on + strand, within PFLU_RS03005 at 692.354 kb on - strand, within PFLU_RS03005 at 692.506 kb on - strand, within PFLU_RS03005 at 692.506 kb on - strand, within PFLU_RS03005 at 692.700 kb on - strand, within PFLU_RS03005 at 692.700 kb on - strand, within PFLU_RS03005 at 693.000 kb on - strand, within PFLU_RS03005 at 693.059 kb on + strand, within PFLU_RS03005 at 693.116 kb on + strand, within PFLU_RS03005 at 693.116 kb on + strand, within PFLU_RS03005 at 693.117 kb on - strand, within PFLU_RS03005 at 693.153 kb on - strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.282 kb on - strand, within PFLU_RS03005 at 693.282 kb on - strand, within PFLU_RS03005 at 693.358 kb on + strand at 693.559 kb on + strand at 693.559 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.599 kb on - strand at 693.599 kb on - strand at 693.599 kb on - strand at 693.616 kb on - strand at 693.616 kb on - strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.620 kb on - strand at 693.620 kb on - strand at 693.620 kb on - strand at 693.620 kb on - strand at 693.620 kb on - strand at 693.681 kb on + strand at 693.681 kb on + strand at 693.681 kb on + strand at 693.681 kb on + strand at 693.682 kb on - strand at 693.682 kb on - strand at 693.682 kb on - strand at 693.698 kb on + strand at 693.698 kb on + strand at 693.698 kb on + strand at 693.698 kb on + strand at 693.698 kb on + strand at 693.699 kb on - strand at 693.699 kb on - strand at 693.699 kb on - strand at 694.069 kb on + strand, within PFLU_RS03010 at 694.295 kb on + strand, within PFLU_RS03010
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 689,959 - +0.3 690,067 + PFLU_RS03000 0.18 -0.1 690,090 + PFLU_RS03000 0.22 +0.3 690,090 + PFLU_RS03000 0.22 +1.1 690,091 - PFLU_RS03000 0.22 +0.3 690,091 - PFLU_RS03000 0.22 +0.2 690,091 - PFLU_RS03000 0.22 -0.2 690,091 - PFLU_RS03000 0.22 +0.8 690,091 - PFLU_RS03000 0.22 +0.2 690,170 + PFLU_RS03000 0.36 -0.9 690,171 - PFLU_RS03000 0.36 +0.6 690,171 - PFLU_RS03000 0.36 +0.5 690,388 - PFLU_RS03000 0.72 +1.1 690,478 + PFLU_RS03000 0.87 -2.1 690,507 + -0.6 690,507 + -0.1 690,507 + +0.1 690,508 - +0.5 690,591 + +0.5 690,591 + +0.6 690,591 + -0.1 690,592 - +0.1 690,592 - +0.4 690,781 + -0.6 690,781 + -0.8 690,781 + +0.2 690,783 + +0.8 690,783 + +0.5 690,783 + -0.1 690,783 + -0.3 690,783 + -0.1 690,783 + -0.3 690,783 + -0.8 690,783 + -0.8 690,783 + +0.3 690,783 + +1.1 690,783 + -0.5 690,783 + -0.1 690,783 + +0.8 690,783 + +1.4 690,784 - +0.1 690,784 - -0.6 690,784 - +0.0 690,784 - +0.2 690,784 - +0.8 690,784 - +0.1 690,784 - -0.1 690,784 - +0.4 690,940 - -1.2 691,070 - -0.7 691,070 - +0.3 692,086 - PFLU_RS03005 0.46 -1.6 692,086 - PFLU_RS03005 0.46 +0.1 692,276 + PFLU_RS03005 0.53 -0.7 692,276 + PFLU_RS03005 0.53 -0.5 692,276 + PFLU_RS03005 0.53 -0.5 692,277 - PFLU_RS03005 0.53 -1.7 692,277 - PFLU_RS03005 0.53 -1.2 692,353 + PFLU_RS03005 0.56 -1.6 692,353 + PFLU_RS03005 0.56 -1.8 692,354 - PFLU_RS03005 0.56 -1.1 692,506 - PFLU_RS03005 0.61 -1.3 692,506 - PFLU_RS03005 0.61 +0.1 692,700 - PFLU_RS03005 0.68 -2.0 692,700 - PFLU_RS03005 0.68 +0.0 693,000 - PFLU_RS03005 0.79 +0.0 693,059 + PFLU_RS03005 0.81 -0.7 693,116 + PFLU_RS03005 0.83 -1.7 693,116 + PFLU_RS03005 0.83 -2.4 693,117 - PFLU_RS03005 0.83 +1.0 693,153 - PFLU_RS03005 0.84 -0.9 693,281 + PFLU_RS03005 0.89 -0.9 693,281 + PFLU_RS03005 0.89 -0.7 693,281 + PFLU_RS03005 0.89 -2.8 693,281 + PFLU_RS03005 0.89 -1.2 693,281 + PFLU_RS03005 0.89 -0.6 693,281 + PFLU_RS03005 0.89 -0.3 693,282 - PFLU_RS03005 0.89 -0.6 693,282 - PFLU_RS03005 0.89 -0.9 693,358 + -1.0 693,559 + -0.2 693,559 + -0.7 693,598 + +0.3 693,598 + -0.8 693,598 + -0.7 693,598 + -0.7 693,598 + -0.8 693,598 + -1.1 693,598 + -0.7 693,599 - +0.5 693,599 - +0.9 693,599 - +1.6 693,616 - +1.1 693,616 - +0.8 693,619 + -0.7 693,619 + -1.7 693,619 + -1.1 693,619 + -0.3 693,619 + -2.0 693,619 + +0.3 693,619 + -1.3 693,619 + -0.2 693,619 + +0.1 693,620 - +0.8 693,620 - +1.8 693,620 - +1.0 693,620 - +1.1 693,620 - +0.4 693,681 + -0.4 693,681 + +1.0 693,681 + +0.7 693,681 + +0.5 693,682 - +0.4 693,682 - +1.1 693,682 - +1.1 693,698 + +0.6 693,698 + +0.1 693,698 + +0.9 693,698 + +0.3 693,698 + +0.2 693,699 - +0.8 693,699 - +1.0 693,699 - +0.3 694,069 + PFLU_RS03010 0.29 -0.2 694,295 + PFLU_RS03010 0.46 +0.5
Or see this region's nucleotide sequence