Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02640 and PFLU_RS02645 are separated by 36 nucleotides PFLU_RS02645 and PFLU_RS02650 are separated by 18 nucleotides PFLU_RS02650 and PFLU_RS02655 are separated by 110 nucleotides
PFLU_RS02640: PFLU_RS02640 - 30S ribosomal protein S18, at 606,076 to 606,306
_RS02640
PFLU_RS02645: PFLU_RS02645 - hypothetical protein, at 606,343 to 607,236
_RS02645
PFLU_RS02650: PFLU_RS02650 - 50S ribosomal protein L9, at 607,255 to 607,701
_RS02650
PFLU_RS02655: PFLU_RS02655 - replicative DNA helicase, at 607,812 to 609,209
_RS02655
Position (kb) 607
608 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 606.283 kb on + strand, within PFLU_RS02640 at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.325 kb on + strand at 606.328 kb on + strand at 606.328 kb on + strand at 606.328 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.427 kb on + strand at 606.554 kb on + strand, within PFLU_RS02645 at 606.748 kb on + strand, within PFLU_RS02645 at 606.748 kb on + strand, within PFLU_RS02645 at 606.868 kb on + strand, within PFLU_RS02645 at 606.886 kb on + strand, within PFLU_RS02645 at 607.022 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.105 kb on + strand, within PFLU_RS02645 at 607.106 kb on - strand, within PFLU_RS02645 at 607.106 kb on - strand, within PFLU_RS02645 at 607.106 kb on - strand, within PFLU_RS02645 at 607.106 kb on - strand, within PFLU_RS02645 at 607.106 kb on - strand, within PFLU_RS02645 at 607.106 kb on - strand, within PFLU_RS02645 at 607.106 kb on - strand, within PFLU_RS02645 at 607.106 kb on - strand, within PFLU_RS02645 at 607.234 kb on + strand at 607.234 kb on + strand at 607.234 kb on + strand at 607.235 kb on - strand at 607.339 kb on + strand, within PFLU_RS02650 at 607.339 kb on + strand, within PFLU_RS02650 at 607.340 kb on - strand, within PFLU_RS02650 at 607.488 kb on + strand, within PFLU_RS02650 at 607.640 kb on + strand, within PFLU_RS02650 at 607.641 kb on - strand, within PFLU_RS02650 at 607.676 kb on + strand at 607.677 kb on - strand at 607.699 kb on + strand at 607.700 kb on - strand at 607.710 kb on + strand at 607.710 kb on + strand at 607.710 kb on + strand at 607.710 kb on + strand at 607.710 kb on + strand at 607.741 kb on + strand at 607.741 kb on + strand at 607.741 kb on + strand at 607.741 kb on + strand at 607.741 kb on + strand at 607.787 kb on + strand at 607.787 kb on + strand at 607.787 kb on + strand at 607.797 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 606,283 + PFLU_RS02640 0.90 -0.6 606,325 + -1.7 606,325 + -0.6 606,325 + -0.5 606,325 + -0.3 606,325 + -1.9 606,325 + -1.4 606,325 + +0.3 606,325 + -1.1 606,325 + -1.4 606,325 + -1.4 606,328 + -2.3 606,328 + +0.8 606,328 + -1.4 606,427 + +0.1 606,427 + -2.0 606,427 + -1.4 606,427 + -1.9 606,427 + -0.6 606,554 + PFLU_RS02645 0.24 +0.6 606,748 + PFLU_RS02645 0.45 +0.6 606,748 + PFLU_RS02645 0.45 +0.4 606,868 + PFLU_RS02645 0.59 -0.6 606,886 + PFLU_RS02645 0.61 +1.0 607,022 + PFLU_RS02645 0.76 -0.2 607,105 + PFLU_RS02645 0.85 -2.7 607,105 + PFLU_RS02645 0.85 -0.4 607,105 + PFLU_RS02645 0.85 -0.1 607,105 + PFLU_RS02645 0.85 -0.8 607,105 + PFLU_RS02645 0.85 -1.4 607,105 + PFLU_RS02645 0.85 +0.2 607,105 + PFLU_RS02645 0.85 -0.2 607,105 + PFLU_RS02645 0.85 -2.1 607,105 + PFLU_RS02645 0.85 -0.2 607,105 + PFLU_RS02645 0.85 +0.8 607,105 + PFLU_RS02645 0.85 -1.3 607,105 + PFLU_RS02645 0.85 -0.8 607,105 + PFLU_RS02645 0.85 -1.8 607,105 + PFLU_RS02645 0.85 -0.8 607,105 + PFLU_RS02645 0.85 -0.3 607,105 + PFLU_RS02645 0.85 -0.7 607,105 + PFLU_RS02645 0.85 -2.9 607,105 + PFLU_RS02645 0.85 +0.1 607,105 + PFLU_RS02645 0.85 +0.2 607,105 + PFLU_RS02645 0.85 +0.3 607,105 + PFLU_RS02645 0.85 -0.4 607,105 + PFLU_RS02645 0.85 +0.8 607,105 + PFLU_RS02645 0.85 +0.4 607,105 + PFLU_RS02645 0.85 +0.4 607,105 + PFLU_RS02645 0.85 -2.3 607,105 + PFLU_RS02645 0.85 -0.7 607,105 + PFLU_RS02645 0.85 +0.2 607,105 + PFLU_RS02645 0.85 +0.1 607,105 + PFLU_RS02645 0.85 +0.3 607,105 + PFLU_RS02645 0.85 +0.4 607,105 + PFLU_RS02645 0.85 +0.1 607,105 + PFLU_RS02645 0.85 +0.2 607,105 + PFLU_RS02645 0.85 -0.7 607,106 - PFLU_RS02645 0.85 -0.6 607,106 - PFLU_RS02645 0.85 -0.9 607,106 - PFLU_RS02645 0.85 -1.0 607,106 - PFLU_RS02645 0.85 +0.3 607,106 - PFLU_RS02645 0.85 +0.3 607,106 - PFLU_RS02645 0.85 -0.4 607,106 - PFLU_RS02645 0.85 -0.9 607,106 - PFLU_RS02645 0.85 -1.1 607,234 + -0.0 607,234 + -0.1 607,234 + -1.7 607,235 - -1.3 607,339 + PFLU_RS02650 0.19 -0.1 607,339 + PFLU_RS02650 0.19 -0.9 607,340 - PFLU_RS02650 0.19 -0.3 607,488 + PFLU_RS02650 0.52 -1.0 607,640 + PFLU_RS02650 0.86 +0.2 607,641 - PFLU_RS02650 0.86 -0.9 607,676 + -0.6 607,677 - +0.3 607,699 + +0.9 607,700 - +2.1 607,710 + +1.1 607,710 + -1.1 607,710 + -1.6 607,710 + -1.0 607,710 + -1.2 607,741 + +0.3 607,741 + -0.7 607,741 + +0.3 607,741 + +0.1 607,741 + -1.8 607,787 + -0.6 607,787 + -1.0 607,787 + +0.6 607,797 + +0.3
Or see this region's nucleotide sequence