Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02275 and PFLU_RS02280 are separated by 383 nucleotides PFLU_RS02280 and PFLU_RS02285 are separated by 54 nucleotides
PFLU_RS02275: PFLU_RS02275 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 517,220 to 519,865
_RS02275
PFLU_RS02280: PFLU_RS02280 - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 520,249 to 523,188
_RS02280
PFLU_RS02285: PFLU_RS02285 - lipopolysaccharide heptosyltransferase II, at 523,243 to 524,277
_RS02285
Position (kb) 520
521
522
523
524 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 519.253 kb on - strand, within PFLU_RS02275 at 519.438 kb on + strand, within PFLU_RS02275 at 519.468 kb on + strand, within PFLU_RS02275 at 519.602 kb on + strand at 519.985 kb on - strand at 520.020 kb on + strand at 520.020 kb on + strand at 520.020 kb on + strand at 520.020 kb on + strand at 520.021 kb on - strand at 520.021 kb on - strand at 520.021 kb on - strand at 520.021 kb on - strand at 520.021 kb on - strand at 520.022 kb on + strand at 520.022 kb on + strand at 520.022 kb on + strand at 520.022 kb on + strand at 520.022 kb on + strand at 520.023 kb on - strand at 520.023 kb on - strand at 520.023 kb on - strand at 520.023 kb on - strand at 520.023 kb on - strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.024 kb on + strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.025 kb on - strand at 520.033 kb on + strand at 520.034 kb on - strand at 520.034 kb on - strand at 520.040 kb on - strand at 520.081 kb on - strand at 520.164 kb on - strand at 520.191 kb on + strand at 520.191 kb on + strand at 520.192 kb on - strand at 520.227 kb on - strand at 520.227 kb on - strand at 520.243 kb on + strand at 520.243 kb on + strand at 520.244 kb on - strand at 520.244 kb on - strand at 520.414 kb on + strand at 520.693 kb on + strand, within PFLU_RS02280 at 520.693 kb on + strand, within PFLU_RS02280 at 520.694 kb on - strand, within PFLU_RS02280 at 520.694 kb on - strand, within PFLU_RS02280 at 520.694 kb on - strand, within PFLU_RS02280 at 520.705 kb on + strand, within PFLU_RS02280 at 520.706 kb on - strand, within PFLU_RS02280 at 520.721 kb on + strand, within PFLU_RS02280 at 520.721 kb on + strand, within PFLU_RS02280 at 520.722 kb on - strand, within PFLU_RS02280 at 520.961 kb on + strand, within PFLU_RS02280 at 520.962 kb on - strand, within PFLU_RS02280 at 520.990 kb on + strand, within PFLU_RS02280 at 521.038 kb on + strand, within PFLU_RS02280 at 521.038 kb on + strand, within PFLU_RS02280 at 521.038 kb on + strand, within PFLU_RS02280 at 521.038 kb on + strand, within PFLU_RS02280 at 521.038 kb on + strand, within PFLU_RS02280 at 521.038 kb on + strand, within PFLU_RS02280 at 521.038 kb on + strand, within PFLU_RS02280 at 521.039 kb on - strand, within PFLU_RS02280 at 521.039 kb on - strand, within PFLU_RS02280 at 521.039 kb on - strand, within PFLU_RS02280 at 521.039 kb on - strand, within PFLU_RS02280 at 521.039 kb on - strand, within PFLU_RS02280 at 521.041 kb on + strand, within PFLU_RS02280 at 521.041 kb on + strand, within PFLU_RS02280 at 521.042 kb on - strand, within PFLU_RS02280 at 521.042 kb on - strand, within PFLU_RS02280 at 521.042 kb on - strand, within PFLU_RS02280 at 521.042 kb on - strand, within PFLU_RS02280 at 521.042 kb on - strand, within PFLU_RS02280 at 521.072 kb on - strand, within PFLU_RS02280 at 521.247 kb on + strand, within PFLU_RS02280 at 521.248 kb on - strand, within PFLU_RS02280 at 521.383 kb on + strand, within PFLU_RS02280 at 521.383 kb on + strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.384 kb on - strand, within PFLU_RS02280 at 521.422 kb on + strand, within PFLU_RS02280 at 521.422 kb on + strand, within PFLU_RS02280 at 521.422 kb on + strand, within PFLU_RS02280 at 521.523 kb on + strand, within PFLU_RS02280 at 521.523 kb on + strand, within PFLU_RS02280 at 521.523 kb on + strand, within PFLU_RS02280 at 521.524 kb on - strand, within PFLU_RS02280 at 521.569 kb on + strand, within PFLU_RS02280 at 521.569 kb on + strand, within PFLU_RS02280 at 521.569 kb on + strand, within PFLU_RS02280 at 521.569 kb on + strand, within PFLU_RS02280 at 521.569 kb on + strand, within PFLU_RS02280 at 521.570 kb on - strand, within PFLU_RS02280 at 521.570 kb on - strand, within PFLU_RS02280 at 521.570 kb on - strand, within PFLU_RS02280 at 521.570 kb on - strand, within PFLU_RS02280 at 521.570 kb on - strand, within PFLU_RS02280 at 521.570 kb on - strand, within PFLU_RS02280 at 521.570 kb on - strand, within PFLU_RS02280 at 521.570 kb on - strand, within PFLU_RS02280 at 521.832 kb on + strand, within PFLU_RS02280 at 521.833 kb on - strand, within PFLU_RS02280 at 521.833 kb on - strand, within PFLU_RS02280 at 521.833 kb on - strand, within PFLU_RS02280 at 521.932 kb on + strand, within PFLU_RS02280 at 521.932 kb on + strand, within PFLU_RS02280 at 521.940 kb on - strand, within PFLU_RS02280 at 521.940 kb on - strand, within PFLU_RS02280 at 522.124 kb on - strand, within PFLU_RS02280 at 522.244 kb on + strand, within PFLU_RS02280 at 522.244 kb on + strand, within PFLU_RS02280 at 522.244 kb on + strand, within PFLU_RS02280 at 522.244 kb on + strand, within PFLU_RS02280 at 522.245 kb on - strand, within PFLU_RS02280 at 522.432 kb on + strand, within PFLU_RS02280 at 522.559 kb on + strand, within PFLU_RS02280 at 522.560 kb on - strand, within PFLU_RS02280 at 522.560 kb on - strand, within PFLU_RS02280 at 522.560 kb on - strand, within PFLU_RS02280 at 522.560 kb on - strand, within PFLU_RS02280 at 522.635 kb on - strand, within PFLU_RS02280 at 522.743 kb on + strand, within PFLU_RS02280 at 522.744 kb on - strand, within PFLU_RS02280 at 522.744 kb on - strand, within PFLU_RS02280 at 522.744 kb on - strand, within PFLU_RS02280 at 522.744 kb on - strand, within PFLU_RS02280 at 522.904 kb on - strand at 522.904 kb on - strand at 522.904 kb on - strand at 522.921 kb on + strand at 522.922 kb on - strand at 522.922 kb on - strand at 522.922 kb on - strand at 522.931 kb on + strand at 522.931 kb on + strand at 522.976 kb on + strand at 522.976 kb on + strand at 522.977 kb on - strand at 522.987 kb on + strand at 522.988 kb on - strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.060 kb on + strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.061 kb on - strand at 523.062 kb on + strand at 523.062 kb on + strand at 523.062 kb on + strand at 523.063 kb on - strand at 523.194 kb on + strand at 523.194 kb on + strand at 523.194 kb on + strand at 523.194 kb on + strand at 523.194 kb on + strand at 523.195 kb on - strand at 523.195 kb on - strand at 523.195 kb on - strand at 523.198 kb on - strand at 523.198 kb on - strand at 523.198 kb on - strand at 523.198 kb on - strand at 523.212 kb on + strand at 523.212 kb on + strand at 523.212 kb on + strand at 523.212 kb on + strand at 523.212 kb on + strand at 523.213 kb on - strand at 523.213 kb on - strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.240 kb on + strand at 523.248 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 519,253 - PFLU_RS02275 0.77 -1.2 519,438 + PFLU_RS02275 0.84 +0.6 519,468 + PFLU_RS02275 0.85 -0.6 519,602 + -0.6 519,985 - +0.2 520,020 + -1.6 520,020 + +1.5 520,020 + +0.5 520,020 + +0.2 520,021 - -0.2 520,021 - -1.5 520,021 - +0.3 520,021 - +1.8 520,021 - +0.5 520,022 + +0.6 520,022 + +0.1 520,022 + -0.3 520,022 + +1.7 520,022 + +1.0 520,023 - +2.1 520,023 - +0.3 520,023 - -0.0 520,023 - +2.3 520,023 - +0.5 520,024 + -1.0 520,024 + +0.3 520,024 + +0.8 520,024 + +1.2 520,024 + -0.1 520,024 + +1.6 520,024 + +1.3 520,024 + +0.9 520,024 + +1.1 520,024 + +0.9 520,024 + +1.2 520,024 + +1.0 520,024 + +1.0 520,024 + +0.9 520,025 - +0.7 520,025 - -0.5 520,025 - +0.4 520,025 - +0.0 520,025 - +0.4 520,025 - +0.4 520,025 - -0.5 520,025 - +0.5 520,025 - -0.3 520,025 - +1.2 520,033 + +0.9 520,034 - -0.1 520,034 - +0.1 520,040 - +0.7 520,081 - +0.1 520,164 - +0.4 520,191 + +0.2 520,191 + +0.9 520,192 - +0.3 520,227 - -2.4 520,227 - +0.3 520,243 + -0.4 520,243 + +0.9 520,244 - +1.6 520,244 - -0.7 520,414 + +0.9 520,693 + PFLU_RS02280 0.15 -0.6 520,693 + PFLU_RS02280 0.15 -0.6 520,694 - PFLU_RS02280 0.15 -0.6 520,694 - PFLU_RS02280 0.15 -2.6 520,694 - PFLU_RS02280 0.15 -2.8 520,705 + PFLU_RS02280 0.16 -0.2 520,706 - PFLU_RS02280 0.16 -3.2 520,721 + PFLU_RS02280 0.16 -1.0 520,721 + PFLU_RS02280 0.16 -0.7 520,722 - PFLU_RS02280 0.16 -0.8 520,961 + PFLU_RS02280 0.24 +0.2 520,962 - PFLU_RS02280 0.24 +0.5 520,990 + PFLU_RS02280 0.25 +0.1 521,038 + PFLU_RS02280 0.27 +0.9 521,038 + PFLU_RS02280 0.27 -1.2 521,038 + PFLU_RS02280 0.27 -0.6 521,038 + PFLU_RS02280 0.27 +0.0 521,038 + PFLU_RS02280 0.27 -0.3 521,038 + PFLU_RS02280 0.27 +0.3 521,038 + PFLU_RS02280 0.27 -0.2 521,039 - PFLU_RS02280 0.27 -1.8 521,039 - PFLU_RS02280 0.27 -2.7 521,039 - PFLU_RS02280 0.27 -1.8 521,039 - PFLU_RS02280 0.27 -2.4 521,039 - PFLU_RS02280 0.27 -2.2 521,041 + PFLU_RS02280 0.27 -0.6 521,041 + PFLU_RS02280 0.27 -2.7 521,042 - PFLU_RS02280 0.27 -3.1 521,042 - PFLU_RS02280 0.27 -2.1 521,042 - PFLU_RS02280 0.27 -1.0 521,042 - PFLU_RS02280 0.27 -2.0 521,042 - PFLU_RS02280 0.27 -1.3 521,072 - PFLU_RS02280 0.28 -4.0 521,247 + PFLU_RS02280 0.34 -1.2 521,248 - PFLU_RS02280 0.34 -1.6 521,383 + PFLU_RS02280 0.39 -1.0 521,383 + PFLU_RS02280 0.39 -0.2 521,384 - PFLU_RS02280 0.39 -4.0 521,384 - PFLU_RS02280 0.39 -0.2 521,384 - PFLU_RS02280 0.39 -3.4 521,384 - PFLU_RS02280 0.39 -3.5 521,384 - PFLU_RS02280 0.39 -2.4 521,384 - PFLU_RS02280 0.39 -2.8 521,384 - PFLU_RS02280 0.39 -3.4 521,384 - PFLU_RS02280 0.39 -4.0 521,384 - PFLU_RS02280 0.39 -2.1 521,384 - PFLU_RS02280 0.39 -3.4 521,422 + PFLU_RS02280 0.40 -0.8 521,422 + PFLU_RS02280 0.40 +0.3 521,422 + PFLU_RS02280 0.40 +0.1 521,523 + PFLU_RS02280 0.43 -0.8 521,523 + PFLU_RS02280 0.43 -1.6 521,523 + PFLU_RS02280 0.43 -0.6 521,524 - PFLU_RS02280 0.43 -1.6 521,569 + PFLU_RS02280 0.45 -3.7 521,569 + PFLU_RS02280 0.45 -1.0 521,569 + PFLU_RS02280 0.45 -0.5 521,569 + PFLU_RS02280 0.45 +0.2 521,569 + PFLU_RS02280 0.45 +0.6 521,570 - PFLU_RS02280 0.45 -2.6 521,570 - PFLU_RS02280 0.45 -2.3 521,570 - PFLU_RS02280 0.45 -3.7 521,570 - PFLU_RS02280 0.45 -2.5 521,570 - PFLU_RS02280 0.45 -1.6 521,570 - PFLU_RS02280 0.45 -3.7 521,570 - PFLU_RS02280 0.45 -2.2 521,570 - PFLU_RS02280 0.45 -2.0 521,832 + PFLU_RS02280 0.54 -2.9 521,833 - PFLU_RS02280 0.54 -1.6 521,833 - PFLU_RS02280 0.54 -3.4 521,833 - PFLU_RS02280 0.54 -3.3 521,932 + PFLU_RS02280 0.57 -2.6 521,932 + PFLU_RS02280 0.57 -2.5 521,940 - PFLU_RS02280 0.58 -1.0 521,940 - PFLU_RS02280 0.58 -0.0 522,124 - PFLU_RS02280 0.64 -0.8 522,244 + PFLU_RS02280 0.68 -4.3 522,244 + PFLU_RS02280 0.68 -3.6 522,244 + PFLU_RS02280 0.68 -2.8 522,244 + PFLU_RS02280 0.68 -2.2 522,245 - PFLU_RS02280 0.68 -3.0 522,432 + PFLU_RS02280 0.74 -2.8 522,559 + PFLU_RS02280 0.79 -3.6 522,560 - PFLU_RS02280 0.79 -4.1 522,560 - PFLU_RS02280 0.79 -2.0 522,560 - PFLU_RS02280 0.79 -3.7 522,560 - PFLU_RS02280 0.79 -2.9 522,635 - PFLU_RS02280 0.81 -2.7 522,743 + PFLU_RS02280 0.85 -1.9 522,744 - PFLU_RS02280 0.85 -3.6 522,744 - PFLU_RS02280 0.85 -3.0 522,744 - PFLU_RS02280 0.85 -2.9 522,744 - PFLU_RS02280 0.85 -1.2 522,904 - -2.3 522,904 - -2.8 522,904 - -2.5 522,921 + -2.6 522,922 - -1.4 522,922 - -2.1 522,922 - -3.4 522,931 + -2.6 522,931 + -3.9 522,976 + -2.1 522,976 + -2.4 522,977 - -1.0 522,987 + -2.9 522,988 - -1.1 523,060 + -1.2 523,060 + -2.1 523,060 + -1.8 523,060 + -2.1 523,060 + -3.4 523,060 + -1.4 523,060 + -2.3 523,060 + -2.2 523,060 + -1.6 523,060 + -3.7 523,061 - -2.9 523,061 - -2.9 523,061 - -1.4 523,061 - -4.1 523,061 - -2.9 523,061 - -3.4 523,061 - -3.4 523,061 - -0.6 523,061 - -2.4 523,062 + -2.9 523,062 + +1.0 523,062 + -3.8 523,063 - -3.5 523,194 + +1.6 523,194 + -2.3 523,194 + -0.9 523,194 + +0.1 523,194 + -0.1 523,195 - +0.4 523,195 - -0.9 523,195 - +0.3 523,198 - +0.3 523,198 - +0.6 523,198 - +1.0 523,198 - -0.2 523,212 + -0.5 523,212 + -0.1 523,212 + -0.3 523,212 + +1.2 523,212 + -0.1 523,213 - +1.0 523,213 - +0.6 523,240 + +0.0 523,240 + +0.1 523,240 + +1.0 523,240 + -0.4 523,240 + +0.5 523,240 + +0.3 523,240 + -0.4 523,248 + +0.4
Or see this region's nucleotide sequence