Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS00435

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
86,771	-				+1.6
86,782	+				-0.3
86,782	+				+0.7
86,782	+				-1.0
86,782	+				+0.0
86,801	+				+0.0
86,801	+				+0.4
86,801	+				-0.1
86,802	-				-0.2
86,828	+				-0.0
86,855	-				-0.4
86,855	-				+1.3
86,855	-				-0.3
86,965	+		PFLU_RS00430	0.15	+0.1
86,965	+		PFLU_RS00430	0.15	+0.5
86,965	+		PFLU_RS00430	0.15	+0.3
86,965	+		PFLU_RS00430	0.15	+1.3
86,965	+		PFLU_RS00430	0.15	-2.4
86,965	+		PFLU_RS00430	0.15	-0.9
86,965	+		PFLU_RS00430	0.15	+0.7
86,965	+		PFLU_RS00430	0.15	-0.2
86,965	+		PFLU_RS00430	0.15	+0.2
86,965	+		PFLU_RS00430	0.15	-0.1
86,965	+		PFLU_RS00430	0.15	-1.3
86,965	+		PFLU_RS00430	0.15	-0.2
86,965	+		PFLU_RS00430	0.15	-0.2
86,965	+		PFLU_RS00430	0.15	+0.1
86,965	+		PFLU_RS00430	0.15	+0.2
86,966	-		PFLU_RS00430	0.15	-0.2
86,966	-		PFLU_RS00430	0.15	-0.9
86,966	-		PFLU_RS00430	0.15	-0.9
86,966	-		PFLU_RS00430	0.15	-0.3
86,966	-		PFLU_RS00430	0.15	+0.0
86,966	-		PFLU_RS00430	0.15	+0.1
86,966	-		PFLU_RS00430	0.15	+0.4
86,966	-		PFLU_RS00430	0.15	-0.0
86,966	-		PFLU_RS00430	0.15	-0.8
87,028	+		PFLU_RS00430	0.23	-1.8
87,028	+		PFLU_RS00430	0.23	+0.1
87,029	-		PFLU_RS00430	0.23	-0.1
87,029	-		PFLU_RS00430	0.23	-0.6
87,057	+		PFLU_RS00430	0.26	-1.0
87,057	+		PFLU_RS00430	0.26	-0.6
87,057	+		PFLU_RS00430	0.26	-1.1
87,058	-		PFLU_RS00430	0.27	-0.9
87,058	-		PFLU_RS00430	0.27	+0.0
87,058	-		PFLU_RS00430	0.27	-0.9
87,058	-		PFLU_RS00430	0.27	-0.8
87,058	-		PFLU_RS00430	0.27	+0.5
87,061	+		PFLU_RS00430	0.27	-0.3
87,061	+		PFLU_RS00430	0.27	-1.1
87,061	+		PFLU_RS00430	0.27	-0.1
87,061	+		PFLU_RS00430	0.27	+0.0
87,061	+		PFLU_RS00430	0.27	-1.4
87,061	+		PFLU_RS00430	0.27	-1.2
87,061	+		PFLU_RS00430	0.27	+0.1
87,061	+		PFLU_RS00430	0.27	-0.1
87,061	+		PFLU_RS00430	0.27	-0.6
87,061	+		PFLU_RS00430	0.27	-0.4
87,061	+		PFLU_RS00430	0.27	+0.3
87,061	+		PFLU_RS00430	0.27	-0.2
87,061	+		PFLU_RS00430	0.27	+0.4
87,061	+		PFLU_RS00430	0.27	-0.0
87,061	+		PFLU_RS00430	0.27	+0.1
87,061	+		PFLU_RS00430	0.27	+0.5
87,061	+		PFLU_RS00430	0.27	-0.3
87,061	+		PFLU_RS00430	0.27	+0.4
87,062	-		PFLU_RS00430	0.27	-0.9
87,062	-		PFLU_RS00430	0.27	-0.7
87,062	-		PFLU_RS00430	0.27	-0.3
87,062	-		PFLU_RS00430	0.27	-1.2
87,062	-		PFLU_RS00430	0.27	-0.0
87,062	-		PFLU_RS00430	0.27	-2.2
87,150	+		PFLU_RS00430	0.38	-0.5
87,151	-		PFLU_RS00430	0.38	-0.1
87,172	+		PFLU_RS00430	0.41	+0.2
87,173	-		PFLU_RS00430	0.41	+0.2
87,173	-		PFLU_RS00430	0.41	-1.2
87,173	-		PFLU_RS00430	0.41	+0.5
87,208	+		PFLU_RS00430	0.45	-0.5
87,208	+		PFLU_RS00430	0.45	+0.8
87,418	+		PFLU_RS00430	0.71	+1.4
87,419	-		PFLU_RS00430	0.71	-0.3
87,441	+		PFLU_RS00430	0.74	+0.3
87,441	+		PFLU_RS00430	0.74	-0.3
87,442	-		PFLU_RS00430	0.74	-0.7
87,442	-		PFLU_RS00430	0.74	-0.1
87,442	-		PFLU_RS00430	0.74	+0.1
87,511	-		PFLU_RS00430	0.82	-0.1
87,652	+				+0.2
87,652	+				+1.3
87,652	+				-0.9
87,653	-				-0.8
87,653	-				-0.2
87,653	-				+0.0
87,653	-				-0.2
87,697	+				+0.2
87,697	+				-0.7
87,697	+				-1.5
87,697	+				+0.9
87,697	+				+0.1
87,697	+				+0.1
87,697	+				-0.0
87,698	-				-0.7
87,698	-				+1.0
87,698	-				-0.2
87,698	-				+0.4
87,698	-				+1.0
87,698	-				-0.3
87,698	-				+0.6
87,715	+				-0.7
87,715	+				+0.7
87,715	+				+0.8
87,715	+				-0.5
87,716	-				+0.7
87,716	-				+0.5
87,716	-				-2.1
87,716	-				+0.2
87,716	-				+0.8
87,731	+				-1.6
87,731	+				-1.3
87,731	+				-1.0
87,731	+				-1.6
87,731	+				-1.8
87,732	-				-1.4
87,733	+				-0.2
87,733	+				-2.1
87,733	+				-0.1
87,733	+				-3.6
87,733	+				-1.5
87,733	+				-0.3
87,733	+				+0.7
87,733	+				-2.4
87,733	+				-0.4
87,733	+				+0.4
87,733	+				-2.8
87,733	+				-1.7
87,733	+				-1.1
87,733	+				-0.9
87,733	+				-1.2
87,733	+				-1.9
87,733	+				-0.6
87,733	+				-1.1
87,733	+				-1.2
87,733	+				-1.1
87,733	+				-0.2
87,733	+				-2.2
87,734	-				-2.4
87,734	-				-3.3
87,734	-				-1.1
87,734	-				-1.3
87,734	-				-1.7
87,734	-				-0.6
87,734	-				-0.6
87,734	-				-2.5
87,734	-				-0.8
87,734	-				-2.2
87,734	-				-1.9
87,734	-				-0.6
87,734	-				+0.6
87,734	-				-0.2
87,734	-				-1.0
87,734	-				-1.8
87,734	-				-1.0
87,734	-				-1.3
87,734	-				-1.9
87,734	-				-1.3
87,734	-				-1.3
87,763	+				-1.7
87,763	+				-1.5
87,763	+				-1.0
87,764	-				-1.4
87,920	+		PFLU_RS00435	0.12	-0.9
87,971	+		PFLU_RS00435	0.14	-1.2
88,039	+		PFLU_RS00435	0.18	+0.7
88,039	+		PFLU_RS00435	0.18	-1.0
88,039	+		PFLU_RS00435	0.18	-1.7
88,039	+		PFLU_RS00435	0.18	-0.1
88,039	+		PFLU_RS00435	0.18	-0.7
88,039	+		PFLU_RS00435	0.18	-0.9
88,039	+		PFLU_RS00435	0.18	-0.2
88,039	+		PFLU_RS00435	0.18	-1.4
88,040	-		PFLU_RS00435	0.18	-0.1
88,040	-		PFLU_RS00435	0.18	-2.2
88,040	-		PFLU_RS00435	0.18	-2.0
88,040	-		PFLU_RS00435	0.18	-2.8
88,040	-		PFLU_RS00435	0.18	-1.2
88,040	-		PFLU_RS00435	0.18	-0.3
88,040	-		PFLU_RS00435	0.18	-1.9
88,040	-		PFLU_RS00435	0.18	-0.1
88,040	-		PFLU_RS00435	0.18	-1.6
88,040	-		PFLU_RS00435	0.18	-1.3
88,040	-		PFLU_RS00435	0.18	-0.6
88,040	-		PFLU_RS00435	0.18	-3.7
88,041	+		PFLU_RS00435	0.18	-0.7
88,042	-		PFLU_RS00435	0.18	-0.0
88,042	-		PFLU_RS00435	0.18	+0.1
88,042	-		PFLU_RS00435	0.18	-0.0
88,042	-		PFLU_RS00435	0.18	-1.2
88,042	-		PFLU_RS00435	0.18	-0.7
88,042	-		PFLU_RS00435	0.18	+0.4
88,042	-		PFLU_RS00435	0.18	+0.2
88,068	+		PFLU_RS00435	0.20	+0.2
88,068	+		PFLU_RS00435	0.20	-1.7
88,068	+		PFLU_RS00435	0.20	-1.8
88,068	+		PFLU_RS00435	0.20	-2.0
88,068	+		PFLU_RS00435	0.20	-2.1
88,068	+		PFLU_RS00435	0.20	-2.4
88,068	+		PFLU_RS00435	0.20	-1.6
88,069	-		PFLU_RS00435	0.20	-1.6
88,069	-		PFLU_RS00435	0.20	-1.9
88,069	-		PFLU_RS00435	0.20	-0.8
88,069	-		PFLU_RS00435	0.20	-1.8
88,069	-		PFLU_RS00435	0.20	-1.7
88,069	-		PFLU_RS00435	0.20	-3.4
88,069	-		PFLU_RS00435	0.20	-1.5
88,156	-		PFLU_RS00435	0.25	-1.4
88,156	-		PFLU_RS00435	0.25	-1.2
88,247	+		PFLU_RS00435	0.30	-2.7
88,247	+		PFLU_RS00435	0.30	-1.6
88,247	+		PFLU_RS00435	0.30	-0.8
88,248	-		PFLU_RS00435	0.30	-0.9
88,362	+		PFLU_RS00435	0.36	-0.0
88,363	-		PFLU_RS00435	0.36	-2.8
88,363	-		PFLU_RS00435	0.36	-3.7
88,363	-		PFLU_RS00435	0.36	-3.1
88,437	-		PFLU_RS00435	0.40	-2.6
88,449	-		PFLU_RS00435	0.41	-1.4
88,472	-		PFLU_RS00435	0.42	-2.6
88,472	-		PFLU_RS00435	0.42	-1.4
88,549	-		PFLU_RS00435	0.47	-3.0
88,701	+		PFLU_RS00435	0.55	-1.0
88,701	+		PFLU_RS00435	0.55	-1.2
88,701	+		PFLU_RS00435	0.55	-1.3
88,701	+		PFLU_RS00435	0.55	-1.4
88,701	+		PFLU_RS00435	0.55	-1.4
88,701	+		PFLU_RS00435	0.55	-1.2
88,701	+		PFLU_RS00435	0.55	-2.1
88,701	+		PFLU_RS00435	0.55	-0.2
88,701	+		PFLU_RS00435	0.55	-2.2
88,701	+		PFLU_RS00435	0.55	-3.4
88,701	+		PFLU_RS00435	0.55	-0.8
88,702	-		PFLU_RS00435	0.55	-0.4
88,702	-		PFLU_RS00435	0.55	-1.8
88,702	-		PFLU_RS00435	0.55	-1.1
88,702	-		PFLU_RS00435	0.55	-1.9
88,702	-		PFLU_RS00435	0.55	-2.1
88,702	-		PFLU_RS00435	0.55	-1.4
88,702	-		PFLU_RS00435	0.55	-1.4
88,702	-		PFLU_RS00435	0.55	-1.4
88,870	-		PFLU_RS00435	0.65	-1.8
88,870	-		PFLU_RS00435	0.65	-2.4
89,249	-		PFLU_RS00435	0.86	-2.0
89,249	-		PFLU_RS00435	0.86	-1.7
89,469	+				-2.0
89,470	-				-2.1
89,493	+				-1.2
89,493	+				-0.2
89,494	-				-1.3
89,501	+				-0.7
89,501	+				-0.7
89,501	+				-0.5
89,501	+				+0.3
89,502	-				-1.7
89,502	-				+1.1
89,502	-				-0.1
89,506	+				-1.8
89,506	+				-0.8
89,506	+				-2.3
89,506	+				-1.3
89,506	+				-2.4
89,506	+				-1.7
89,506	+				+0.1
89,507	-				-0.1
89,522	+				-2.2
89,522	+				+0.2
89,522	+				-0.2
89,522	+				-0.1
89,522	+				+0.1
89,523	-				-1.5
89,523	-				-2.2
89,523	-				-0.7
89,523	-				+0.8
89,523	-				+0.9
89,523	-				+1.4
89,523	-				+0.5
89,523	-				+0.6
89,541	-				+0.7
89,710	+		PFLU_RS00440	0.15	+0.5
89,711	-		PFLU_RS00440	0.15	+0.1
89,746	+		PFLU_RS00440	0.17	-0.1
89,746	+		PFLU_RS00440	0.17	+0.5
89,747	-		PFLU_RS00440	0.17	-0.4
89,747	-		PFLU_RS00440	0.17	+0.3
89,747	-		PFLU_RS00440	0.17	-1.0
89,749	+		PFLU_RS00440	0.18	-0.6
89,749	+		PFLU_RS00440	0.18	+1.0
89,749	+		PFLU_RS00440	0.18	-0.2
89,749	+		PFLU_RS00440	0.18	+0.1
89,749	+		PFLU_RS00440	0.18	+0.1
89,749	+		PFLU_RS00440	0.18	+0.1
89,749	+		PFLU_RS00440	0.18	-0.6
89,749	+		PFLU_RS00440	0.18	+0.4
89,749	+		PFLU_RS00440	0.18	+0.0
89,749	+		PFLU_RS00440	0.18	+0.3
89,749	+		PFLU_RS00440	0.18	-0.1
89,749	+		PFLU_RS00440	0.18	-3.1
89,749	+		PFLU_RS00440	0.18	-0.1
89,749	+		PFLU_RS00440	0.18	-1.3
89,749	+		PFLU_RS00440	0.18	+0.5
89,749	+		PFLU_RS00440	0.18	+0.4
89,749	+		PFLU_RS00440	0.18	+0.2
89,749	+		PFLU_RS00440	0.18	+0.3
89,749	+		PFLU_RS00440	0.18	-0.2
89,749	+		PFLU_RS00440	0.18	-1.0
89,749	+		PFLU_RS00440	0.18	-1.3
89,749	+		PFLU_RS00440	0.18	+0.4
89,749	+		PFLU_RS00440	0.18	+0.5
89,749	+		PFLU_RS00440	0.18	+1.0
89,750	-		PFLU_RS00440	0.18	-0.7
89,750	-		PFLU_RS00440	0.18	-1.7
89,750	-		PFLU_RS00440	0.18	-0.1
89,750	-		PFLU_RS00440	0.18	-0.4
89,750	-		PFLU_RS00440	0.18	+0.7
89,750	-		PFLU_RS00440	0.18	-0.1
89,750	-		PFLU_RS00440	0.18	-1.0
89,750	-		PFLU_RS00440	0.18	-0.0
89,750	-		PFLU_RS00440	0.18	+0.5
89,750	-		PFLU_RS00440	0.18	-0.1
89,750	-		PFLU_RS00440	0.18	+0.0
89,750	-		PFLU_RS00440	0.18	-0.5
89,750	-		PFLU_RS00440	0.18	-1.2
89,750	-		PFLU_RS00440	0.18	-0.3
89,750	-		PFLU_RS00440	0.18	+0.3
89,750	-		PFLU_RS00440	0.18	+0.6
89,750	-		PFLU_RS00440	0.18	-0.1
89,769	+		PFLU_RS00440	0.19	-1.0
89,786	+		PFLU_RS00440	0.20	-0.4
89,786	+		PFLU_RS00440	0.20	-0.1
89,787	-		PFLU_RS00440	0.20	-0.3
89,787	-		PFLU_RS00440	0.20	-1.1
89,841	-		PFLU_RS00440	0.24	-0.3
89,841	-		PFLU_RS00440	0.24	+0.3
89,895	+		PFLU_RS00440	0.28	-0.8
89,895	+		PFLU_RS00440	0.28	+0.1
89,895	+		PFLU_RS00440	0.28	-0.3
89,895	+		PFLU_RS00440	0.28	+1.1
89,895	+		PFLU_RS00440	0.28	-1.7
89,896	-		PFLU_RS00440	0.29	-0.7
89,896	-		PFLU_RS00440	0.29	-0.8
90,057	-		PFLU_RS00440	0.40	-0.2
90,087	+		PFLU_RS00440	0.43	+0.2
90,087	+		PFLU_RS00440	0.43	+0.3
90,087	+		PFLU_RS00440	0.43	-1.4
90,088	-		PFLU_RS00440	0.43	-0.6
90,088	-		PFLU_RS00440	0.43	-2.4
90,088	-		PFLU_RS00440	0.43	+0.2
90,187	-		PFLU_RS00440	0.50	+0.1
90,202	-		PFLU_RS00440	0.51	-0.5
90,318	+		PFLU_RS00440	0.60	-0.5
90,389	-		PFLU_RS00440	0.65	-1.6
90,389	-		PFLU_RS00440	0.65	+0.1
90,389	-		PFLU_RS00440	0.65	-2.1
90,391	+		PFLU_RS00440	0.65	-0.3
90,391	+		PFLU_RS00440	0.65	-0.1
90,391	+		PFLU_RS00440	0.65	+0.2
90,391	+		PFLU_RS00440	0.65	-0.0
90,391	+		PFLU_RS00440	0.65	-0.7
90,391	+		PFLU_RS00440	0.65	-2.0
90,391	+		PFLU_RS00440	0.65	+0.4
90,391	+		PFLU_RS00440	0.65	+0.1
90,391	+		PFLU_RS00440	0.65	-1.0
90,391	+		PFLU_RS00440	0.65	+0.4
90,392	-		PFLU_RS00440	0.65	-1.8
90,392	-		PFLU_RS00440	0.65	-0.3
90,392	-		PFLU_RS00440	0.65	-1.0
90,392	-		PFLU_RS00440	0.65	-0.7
90,392	-		PFLU_RS00440	0.65	-0.2
90,392	-		PFLU_RS00440	0.65	-1.8
90,392	-		PFLU_RS00440	0.65	-1.4
90,392	-		PFLU_RS00440	0.65	+0.4
90,392	-		PFLU_RS00440	0.65	-0.1
90,392	-		PFLU_RS00440	0.65	+0.1
90,392	-		PFLU_RS00440	0.65	+0.1
90,392	-		PFLU_RS00440	0.65	+0.5