Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS23600 and PFLU_RS23605 are separated by 224 nucleotides PFLU_RS23605 and PFLU_RS23610 are separated by 152 nucleotides PFLU_RS23610 and PFLU_RS23615 are separated by 15 nucleotides PFLU_RS23615 and PFLU_RS23620 are separated by 8 nucleotides
PFLU_RS23600: PFLU_RS23600 - hypothetical protein, at 5,294,357 to 5,294,587
_RS23600
PFLU_RS23605: PFLU_RS23605 - hypothetical protein, at 5,294,812 to 5,295,237
_RS23605
PFLU_RS23610: PFLU_RS23610 - glutathione S-transferase family protein, at 5,295,390 to 5,296,022
_RS23610
PFLU_RS23615: PFLU_RS23615 - NAD(P)-dependent oxidoreductase, at 5,296,038 to 5,296,775
_RS23615
PFLU_RS23620: PFLU_RS23620 - MFS transporter, at 5,296,784 to 5,298,193
_RS23620
Position (kb) 5295
5296
5297 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5294.432 kb on + strand, within PFLU_RS23600 at 5294.432 kb on + strand, within PFLU_RS23600 at 5294.432 kb on + strand, within PFLU_RS23600 at 5294.432 kb on + strand, within PFLU_RS23600 at 5294.432 kb on + strand, within PFLU_RS23600 at 5294.432 kb on + strand, within PFLU_RS23600 at 5294.433 kb on - strand, within PFLU_RS23600 at 5294.433 kb on - strand, within PFLU_RS23600 at 5294.433 kb on - strand, within PFLU_RS23600 at 5294.442 kb on + strand, within PFLU_RS23600 at 5294.442 kb on + strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.443 kb on - strand, within PFLU_RS23600 at 5294.519 kb on + strand, within PFLU_RS23600 at 5294.519 kb on + strand, within PFLU_RS23600 at 5294.520 kb on - strand, within PFLU_RS23600 at 5294.520 kb on - strand, within PFLU_RS23600 at 5294.520 kb on - strand, within PFLU_RS23600 at 5294.520 kb on - strand, within PFLU_RS23600 at 5294.551 kb on - strand, within PFLU_RS23600 at 5294.699 kb on - strand at 5294.722 kb on - strand at 5294.739 kb on + strand at 5294.746 kb on + strand at 5294.749 kb on + strand at 5294.750 kb on - strand at 5294.768 kb on + strand at 5294.880 kb on + strand, within PFLU_RS23605 at 5294.913 kb on + strand, within PFLU_RS23605 at 5294.914 kb on - strand, within PFLU_RS23605 at 5294.921 kb on + strand, within PFLU_RS23605 at 5294.922 kb on - strand, within PFLU_RS23605 at 5294.922 kb on - strand, within PFLU_RS23605 at 5294.926 kb on - strand, within PFLU_RS23605 at 5294.945 kb on + strand, within PFLU_RS23605 at 5294.945 kb on + strand, within PFLU_RS23605 at 5294.946 kb on - strand, within PFLU_RS23605 at 5294.967 kb on + strand, within PFLU_RS23605 at 5294.967 kb on + strand, within PFLU_RS23605 at 5294.968 kb on - strand, within PFLU_RS23605 at 5295.001 kb on + strand, within PFLU_RS23605 at 5295.001 kb on + strand, within PFLU_RS23605 at 5295.001 kb on + strand, within PFLU_RS23605 at 5295.001 kb on + strand, within PFLU_RS23605 at 5295.001 kb on + strand, within PFLU_RS23605 at 5295.002 kb on - strand, within PFLU_RS23605 at 5295.002 kb on - strand, within PFLU_RS23605 at 5295.002 kb on - strand, within PFLU_RS23605 at 5295.003 kb on + strand, within PFLU_RS23605 at 5295.041 kb on + strand, within PFLU_RS23605 at 5295.041 kb on + strand, within PFLU_RS23605 at 5295.042 kb on - strand, within PFLU_RS23605 at 5295.053 kb on + strand, within PFLU_RS23605 at 5295.053 kb on + strand, within PFLU_RS23605 at 5295.053 kb on + strand, within PFLU_RS23605 at 5295.085 kb on - strand, within PFLU_RS23605 at 5295.124 kb on + strand, within PFLU_RS23605 at 5295.125 kb on - strand, within PFLU_RS23605 at 5295.126 kb on + strand, within PFLU_RS23605 at 5295.127 kb on - strand, within PFLU_RS23605 at 5295.147 kb on - strand, within PFLU_RS23605 at 5295.280 kb on - strand at 5295.306 kb on + strand at 5295.306 kb on + strand at 5295.306 kb on + strand at 5295.334 kb on + strand at 5295.334 kb on + strand at 5295.334 kb on + strand at 5295.335 kb on - strand at 5295.335 kb on - strand at 5295.336 kb on + strand at 5295.336 kb on + strand at 5295.336 kb on + strand at 5295.336 kb on + strand at 5295.336 kb on + strand at 5295.336 kb on + strand at 5295.336 kb on + strand at 5295.336 kb on + strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.337 kb on - strand at 5295.350 kb on + strand at 5295.350 kb on + strand at 5295.351 kb on - strand at 5295.446 kb on - strand at 5295.446 kb on - strand at 5295.446 kb on - strand at 5295.478 kb on - strand, within PFLU_RS23610 at 5295.478 kb on - strand, within PFLU_RS23610 at 5295.688 kb on + strand, within PFLU_RS23610 at 5295.689 kb on - strand, within PFLU_RS23610 at 5295.852 kb on + strand, within PFLU_RS23610 at 5295.852 kb on + strand, within PFLU_RS23610 at 5295.852 kb on + strand, within PFLU_RS23610 at 5295.852 kb on + strand, within PFLU_RS23610 at 5295.852 kb on + strand, within PFLU_RS23610 at 5295.852 kb on + strand, within PFLU_RS23610 at 5295.852 kb on + strand, within PFLU_RS23610 at 5295.852 kb on + strand, within PFLU_RS23610 at 5295.853 kb on - strand, within PFLU_RS23610 at 5295.853 kb on - strand, within PFLU_RS23610 at 5295.853 kb on - strand, within PFLU_RS23610 at 5295.853 kb on - strand, within PFLU_RS23610 at 5295.853 kb on - strand, within PFLU_RS23610 at 5295.960 kb on + strand at 5295.960 kb on + strand at 5295.960 kb on + strand at 5295.960 kb on + strand at 5295.960 kb on + strand at 5295.961 kb on - strand at 5295.961 kb on - strand at 5295.961 kb on - strand at 5295.963 kb on + strand at 5295.963 kb on + strand at 5295.963 kb on + strand at 5295.963 kb on + strand at 5295.963 kb on + strand at 5295.963 kb on + strand at 5295.963 kb on + strand at 5295.963 kb on + strand at 5295.964 kb on - strand at 5295.964 kb on - strand at 5295.964 kb on - strand at 5295.964 kb on - strand at 5295.964 kb on - strand at 5296.020 kb on + strand at 5296.020 kb on + strand at 5296.020 kb on + strand at 5296.021 kb on - strand at 5296.021 kb on - strand at 5296.021 kb on - strand at 5296.021 kb on - strand at 5296.054 kb on + strand at 5296.054 kb on + strand at 5296.054 kb on + strand at 5296.054 kb on + strand at 5296.055 kb on - strand at 5296.055 kb on - strand at 5296.055 kb on - strand at 5296.055 kb on - strand at 5296.055 kb on - strand at 5296.055 kb on - strand at 5296.055 kb on - strand at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.314 kb on + strand, within PFLU_RS23615 at 5296.315 kb on - strand, within PFLU_RS23615 at 5296.315 kb on - strand, within PFLU_RS23615 at 5296.315 kb on - strand, within PFLU_RS23615 at 5296.315 kb on - strand, within PFLU_RS23615 at 5296.345 kb on + strand, within PFLU_RS23615 at 5296.358 kb on - strand, within PFLU_RS23615 at 5296.358 kb on - strand, within PFLU_RS23615 at 5296.389 kb on + strand, within PFLU_RS23615 at 5296.482 kb on + strand, within PFLU_RS23615 at 5296.485 kb on + strand, within PFLU_RS23615 at 5296.485 kb on + strand, within PFLU_RS23615 at 5296.485 kb on + strand, within PFLU_RS23615 at 5296.485 kb on + strand, within PFLU_RS23615 at 5296.485 kb on + strand, within PFLU_RS23615 at 5296.486 kb on - strand, within PFLU_RS23615 at 5296.486 kb on - strand, within PFLU_RS23615 at 5296.486 kb on - strand, within PFLU_RS23615 at 5296.664 kb on + strand, within PFLU_RS23615 at 5296.664 kb on + strand, within PFLU_RS23615 at 5296.664 kb on + strand, within PFLU_RS23615 at 5296.664 kb on + strand, within PFLU_RS23615 at 5296.664 kb on + strand, within PFLU_RS23615 at 5296.664 kb on + strand, within PFLU_RS23615 at 5296.664 kb on + strand, within PFLU_RS23615 at 5296.665 kb on - strand, within PFLU_RS23615 at 5296.665 kb on - strand, within PFLU_RS23615 at 5296.665 kb on - strand, within PFLU_RS23615 at 5296.665 kb on - strand, within PFLU_RS23615 at 5296.665 kb on - strand, within PFLU_RS23615 at 5296.722 kb on + strand at 5296.770 kb on + strand at 5296.770 kb on + strand at 5296.771 kb on - strand at 5296.771 kb on - strand at 5296.771 kb on - strand at 5296.771 kb on - strand at 5296.771 kb on - strand at 5296.771 kb on - strand at 5296.771 kb on - strand at 5296.801 kb on + strand at 5296.871 kb on - strand at 5296.922 kb on + strand at 5296.922 kb on + strand at 5296.922 kb on + strand at 5296.922 kb on + strand at 5296.922 kb on + strand at 5296.922 kb on + strand at 5296.922 kb on + strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.923 kb on - strand at 5296.943 kb on + strand, within PFLU_RS23620 at 5296.943 kb on + strand, within PFLU_RS23620 at 5296.943 kb on + strand, within PFLU_RS23620 at 5296.943 kb on + strand, within PFLU_RS23620 at 5296.944 kb on - strand, within PFLU_RS23620 at 5296.944 kb on - strand, within PFLU_RS23620 at 5296.944 kb on - strand, within PFLU_RS23620 at 5296.944 kb on - strand, within PFLU_RS23620 at 5296.944 kb on - strand, within PFLU_RS23620 at 5296.944 kb on - strand, within PFLU_RS23620
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 5,294,432 + PFLU_RS23600 0.32 -0.5 5,294,432 + PFLU_RS23600 0.32 -0.0 5,294,432 + PFLU_RS23600 0.32 -0.4 5,294,432 + PFLU_RS23600 0.32 +0.0 5,294,432 + PFLU_RS23600 0.32 +0.2 5,294,432 + PFLU_RS23600 0.32 +0.9 5,294,433 - PFLU_RS23600 0.33 -0.5 5,294,433 - PFLU_RS23600 0.33 +0.5 5,294,433 - PFLU_RS23600 0.33 +0.9 5,294,442 + PFLU_RS23600 0.37 +0.5 5,294,442 + PFLU_RS23600 0.37 +1.2 5,294,443 - PFLU_RS23600 0.37 +0.5 5,294,443 - PFLU_RS23600 0.37 +0.4 5,294,443 - PFLU_RS23600 0.37 -0.5 5,294,443 - PFLU_RS23600 0.37 +0.8 5,294,443 - PFLU_RS23600 0.37 +0.3 5,294,443 - PFLU_RS23600 0.37 +0.0 5,294,443 - PFLU_RS23600 0.37 +0.7 5,294,443 - PFLU_RS23600 0.37 +0.8 5,294,443 - PFLU_RS23600 0.37 +0.3 5,294,519 + PFLU_RS23600 0.70 +0.3 5,294,519 + PFLU_RS23600 0.70 +1.0 5,294,520 - PFLU_RS23600 0.71 +0.3 5,294,520 - PFLU_RS23600 0.71 +0.2 5,294,520 - PFLU_RS23600 0.71 +0.6 5,294,520 - PFLU_RS23600 0.71 -0.6 5,294,551 - PFLU_RS23600 0.84 +0.3 5,294,699 - -1.2 5,294,722 - -0.5 5,294,739 + +1.3 5,294,746 + +0.5 5,294,749 + -0.7 5,294,750 - +0.6 5,294,768 + +0.6 5,294,880 + PFLU_RS23605 0.16 +1.2 5,294,913 + PFLU_RS23605 0.24 +0.6 5,294,914 - PFLU_RS23605 0.24 +0.6 5,294,921 + PFLU_RS23605 0.26 +0.2 5,294,922 - PFLU_RS23605 0.26 +0.9 5,294,922 - PFLU_RS23605 0.26 +1.9 5,294,926 - PFLU_RS23605 0.27 +0.8 5,294,945 + PFLU_RS23605 0.31 -0.5 5,294,945 + PFLU_RS23605 0.31 +0.3 5,294,946 - PFLU_RS23605 0.31 -0.6 5,294,967 + PFLU_RS23605 0.36 -0.4 5,294,967 + PFLU_RS23605 0.36 +0.1 5,294,968 - PFLU_RS23605 0.37 +0.6 5,295,001 + PFLU_RS23605 0.44 +0.3 5,295,001 + PFLU_RS23605 0.44 -1.4 5,295,001 + PFLU_RS23605 0.44 +1.4 5,295,001 + PFLU_RS23605 0.44 -0.4 5,295,001 + PFLU_RS23605 0.44 +0.2 5,295,002 - PFLU_RS23605 0.45 +0.2 5,295,002 - PFLU_RS23605 0.45 +0.1 5,295,002 - PFLU_RS23605 0.45 -0.2 5,295,003 + PFLU_RS23605 0.45 +0.1 5,295,041 + PFLU_RS23605 0.54 +2.2 5,295,041 + PFLU_RS23605 0.54 +0.0 5,295,042 - PFLU_RS23605 0.54 -0.5 5,295,053 + PFLU_RS23605 0.57 -0.6 5,295,053 + PFLU_RS23605 0.57 +0.1 5,295,053 + PFLU_RS23605 0.57 -0.5 5,295,085 - PFLU_RS23605 0.64 -0.6 5,295,124 + PFLU_RS23605 0.73 +1.7 5,295,125 - PFLU_RS23605 0.73 +0.6 5,295,126 + PFLU_RS23605 0.74 -1.4 5,295,127 - PFLU_RS23605 0.74 -0.3 5,295,147 - PFLU_RS23605 0.79 +0.0 5,295,280 - -0.2 5,295,306 + +0.6 5,295,306 + +0.5 5,295,306 + +0.6 5,295,334 + +0.2 5,295,334 + +0.3 5,295,334 + -0.1 5,295,335 - -0.3 5,295,335 - -0.2 5,295,336 + +0.2 5,295,336 + +0.3 5,295,336 + +1.2 5,295,336 + -0.9 5,295,336 + -0.3 5,295,336 + +0.2 5,295,336 + +0.9 5,295,336 + -2.9 5,295,337 - +0.5 5,295,337 - -1.0 5,295,337 - -1.9 5,295,337 - -0.7 5,295,337 - +0.5 5,295,337 - +0.6 5,295,337 - +1.5 5,295,337 - +0.9 5,295,337 - -0.0 5,295,337 - +0.7 5,295,337 - +0.2 5,295,350 + +0.2 5,295,350 + -0.4 5,295,351 - +0.2 5,295,446 - +1.2 5,295,446 - -0.2 5,295,446 - -0.3 5,295,478 - PFLU_RS23610 0.14 -1.2 5,295,478 - PFLU_RS23610 0.14 -0.8 5,295,688 + PFLU_RS23610 0.47 +0.2 5,295,689 - PFLU_RS23610 0.47 -0.8 5,295,852 + PFLU_RS23610 0.73 -0.4 5,295,852 + PFLU_RS23610 0.73 +1.4 5,295,852 + PFLU_RS23610 0.73 -0.5 5,295,852 + PFLU_RS23610 0.73 -1.3 5,295,852 + PFLU_RS23610 0.73 +1.1 5,295,852 + PFLU_RS23610 0.73 -0.6 5,295,852 + PFLU_RS23610 0.73 -0.1 5,295,852 + PFLU_RS23610 0.73 +0.4 5,295,853 - PFLU_RS23610 0.73 +1.9 5,295,853 - PFLU_RS23610 0.73 +1.5 5,295,853 - PFLU_RS23610 0.73 +0.6 5,295,853 - PFLU_RS23610 0.73 +0.7 5,295,853 - PFLU_RS23610 0.73 +0.7 5,295,960 + +0.5 5,295,960 + +0.3 5,295,960 + +0.0 5,295,960 + +0.4 5,295,960 + +0.6 5,295,961 - -0.1 5,295,961 - -0.2 5,295,961 - -0.3 5,295,963 + +0.4 5,295,963 + +0.8 5,295,963 + -1.4 5,295,963 + +0.1 5,295,963 + +1.1 5,295,963 + +0.6 5,295,963 + -1.2 5,295,963 + +0.8 5,295,964 - +0.2 5,295,964 - +0.2 5,295,964 - +1.0 5,295,964 - -2.2 5,295,964 - +0.3 5,296,020 + -0.1 5,296,020 + +0.2 5,296,020 + -0.4 5,296,021 - -0.6 5,296,021 - -0.9 5,296,021 - +1.1 5,296,021 - +0.7 5,296,054 + +0.7 5,296,054 + +0.6 5,296,054 + +0.2 5,296,054 + +0.5 5,296,055 - +0.3 5,296,055 - -1.0 5,296,055 - -0.8 5,296,055 - +1.0 5,296,055 - -1.1 5,296,055 - +0.7 5,296,055 - -0.3 5,296,314 + PFLU_RS23615 0.37 +0.5 5,296,314 + PFLU_RS23615 0.37 -0.3 5,296,314 + PFLU_RS23615 0.37 +1.0 5,296,314 + PFLU_RS23615 0.37 +0.3 5,296,314 + PFLU_RS23615 0.37 -0.6 5,296,314 + PFLU_RS23615 0.37 +1.2 5,296,314 + PFLU_RS23615 0.37 +2.0 5,296,314 + PFLU_RS23615 0.37 -0.0 5,296,314 + PFLU_RS23615 0.37 +0.1 5,296,314 + PFLU_RS23615 0.37 +0.2 5,296,314 + PFLU_RS23615 0.37 +1.0 5,296,315 - PFLU_RS23615 0.38 +0.8 5,296,315 - PFLU_RS23615 0.38 +0.1 5,296,315 - PFLU_RS23615 0.38 +0.5 5,296,315 - PFLU_RS23615 0.38 -0.7 5,296,345 + PFLU_RS23615 0.42 +0.3 5,296,358 - PFLU_RS23615 0.43 -0.4 5,296,358 - PFLU_RS23615 0.43 +0.7 5,296,389 + PFLU_RS23615 0.48 +1.1 5,296,482 + PFLU_RS23615 0.60 -1.2 5,296,485 + PFLU_RS23615 0.61 -0.0 5,296,485 + PFLU_RS23615 0.61 +0.1 5,296,485 + PFLU_RS23615 0.61 +0.3 5,296,485 + PFLU_RS23615 0.61 +0.2 5,296,485 + PFLU_RS23615 0.61 -0.7 5,296,486 - PFLU_RS23615 0.61 -0.1 5,296,486 - PFLU_RS23615 0.61 +0.1 5,296,486 - PFLU_RS23615 0.61 +0.3 5,296,664 + PFLU_RS23615 0.85 -0.4 5,296,664 + PFLU_RS23615 0.85 +0.4 5,296,664 + PFLU_RS23615 0.85 -0.6 5,296,664 + PFLU_RS23615 0.85 +0.5 5,296,664 + PFLU_RS23615 0.85 +0.2 5,296,664 + PFLU_RS23615 0.85 +0.2 5,296,664 + PFLU_RS23615 0.85 +1.3 5,296,665 - PFLU_RS23615 0.85 -0.2 5,296,665 - PFLU_RS23615 0.85 -1.7 5,296,665 - PFLU_RS23615 0.85 -0.4 5,296,665 - PFLU_RS23615 0.85 -1.2 5,296,665 - PFLU_RS23615 0.85 -0.7 5,296,722 + +0.4 5,296,770 + -1.0 5,296,770 + -0.4 5,296,771 - +0.6 5,296,771 - +0.7 5,296,771 - +2.0 5,296,771 - -0.0 5,296,771 - +0.4 5,296,771 - +0.8 5,296,771 - -0.0 5,296,801 + -0.4 5,296,871 - -0.3 5,296,922 + +0.7 5,296,922 + +0.7 5,296,922 + -0.4 5,296,922 + +0.1 5,296,922 + +0.5 5,296,922 + +0.4 5,296,922 + +0.5 5,296,923 - -0.2 5,296,923 - +0.4 5,296,923 - -1.4 5,296,923 - +0.3 5,296,923 - -0.1 5,296,923 - -0.1 5,296,923 - +1.9 5,296,923 - +0.1 5,296,923 - +0.2 5,296,923 - +0.6 5,296,943 + PFLU_RS23620 0.11 -0.7 5,296,943 + PFLU_RS23620 0.11 +0.0 5,296,943 + PFLU_RS23620 0.11 +0.3 5,296,943 + PFLU_RS23620 0.11 +0.0 5,296,944 - PFLU_RS23620 0.11 +0.4 5,296,944 - PFLU_RS23620 0.11 +0.6 5,296,944 - PFLU_RS23620 0.11 -0.0 5,296,944 - PFLU_RS23620 0.11 +0.3 5,296,944 - PFLU_RS23620 0.11 -0.4 5,296,944 - PFLU_RS23620 0.11 -0.3
Or see this region's nucleotide sequence