Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS17330

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
3,940,911	+				-0.4
3,940,926	-				+1.1
3,940,926	-				+0.2
3,940,927	+				+2.1
3,940,928	-				+0.1
3,940,952	+				-0.1
3,940,952	+				-0.1
3,940,953	-				+0.1
3,940,953	-				-0.0
3,940,956	+				-0.3
3,940,956	+				+1.0
3,940,956	+				+0.2
3,940,956	+				-2.8
3,940,957	-				+0.5
3,940,957	-				-0.4
3,940,957	-				-0.3
3,940,957	-				+0.5
3,940,973	+				+0.7
3,940,973	+				+0.1
3,940,974	-				-0.3
3,940,979	+				-0.3
3,941,007	+				+0.7
3,941,007	+				-0.6
3,941,007	+				+0.4
3,941,007	+				-0.3
3,941,007	+				-0.0
3,941,018	-				+0.2
3,941,018	-				-1.0
3,941,099	+		PFLU_RS17325	0.12	-0.8
3,941,099	+		PFLU_RS17325	0.12	+0.1
3,941,100	-		PFLU_RS17325	0.12	+0.8
3,941,100	-		PFLU_RS17325	0.12	+1.1
3,941,118	+		PFLU_RS17325	0.14	-1.1
3,941,118	+		PFLU_RS17325	0.14	-2.1
3,941,119	-		PFLU_RS17325	0.15	-0.1
3,941,141	+		PFLU_RS17325	0.17	-0.6
3,941,141	+		PFLU_RS17325	0.17	+0.1
3,941,141	+		PFLU_RS17325	0.17	-0.0
3,941,141	+		PFLU_RS17325	0.17	-0.3
3,941,141	+		PFLU_RS17325	0.17	+0.2
3,941,141	+		PFLU_RS17325	0.17	+0.3
3,941,141	+		PFLU_RS17325	0.17	+0.3
3,941,141	+		PFLU_RS17325	0.17	-0.7
3,941,141	+		PFLU_RS17325	0.17	-0.5
3,941,141	+		PFLU_RS17325	0.17	+0.6
3,941,141	+		PFLU_RS17325	0.17	-1.1
3,941,142	-		PFLU_RS17325	0.17	-0.0
3,941,142	-		PFLU_RS17325	0.17	+0.4
3,941,142	-		PFLU_RS17325	0.17	+0.9
3,941,142	-		PFLU_RS17325	0.17	-0.5
3,941,142	-		PFLU_RS17325	0.17	-1.2
3,941,142	-		PFLU_RS17325	0.17	-1.0
3,941,142	-		PFLU_RS17325	0.17	+0.2
3,941,195	+		PFLU_RS17325	0.24	+0.7
3,941,195	+		PFLU_RS17325	0.24	-0.6
3,941,195	+		PFLU_RS17325	0.24	-0.5
3,941,195	+		PFLU_RS17325	0.24	-1.3
3,941,237	-		PFLU_RS17325	0.29	-2.4
3,941,246	+		PFLU_RS17325	0.30	-0.4
3,941,246	+		PFLU_RS17325	0.30	+1.1
3,941,247	-		PFLU_RS17325	0.30	+0.4
3,941,366	+		PFLU_RS17325	0.45	-0.4
3,941,366	+		PFLU_RS17325	0.45	+0.5
3,941,366	+		PFLU_RS17325	0.45	-0.0
3,941,366	+		PFLU_RS17325	0.45	-1.4
3,941,367	-		PFLU_RS17325	0.45	+0.2
3,941,367	-		PFLU_RS17325	0.45	-0.9
3,941,367	-		PFLU_RS17325	0.45	-0.7
3,941,367	-		PFLU_RS17325	0.45	-0.4
3,941,367	-		PFLU_RS17325	0.45	+0.3
3,941,369	-		PFLU_RS17325	0.45	+0.8
3,941,385	-		PFLU_RS17325	0.47	+0.2
3,941,422	-		PFLU_RS17325	0.52	+0.5
3,941,422	-		PFLU_RS17325	0.52	+0.2
3,941,422	-		PFLU_RS17325	0.52	+1.3
3,941,422	-		PFLU_RS17325	0.52	+0.8
3,941,428	+		PFLU_RS17325	0.52	-0.4
3,941,440	+		PFLU_RS17325	0.54	+1.2
3,941,440	+		PFLU_RS17325	0.54	+0.1
3,941,440	+		PFLU_RS17325	0.54	+0.7
3,941,440	+		PFLU_RS17325	0.54	+0.8
3,941,441	-		PFLU_RS17325	0.54	+0.2
3,941,441	-		PFLU_RS17325	0.54	-0.5
3,941,441	-		PFLU_RS17325	0.54	-2.2
3,941,444	+		PFLU_RS17325	0.54	-1.7
3,941,444	+		PFLU_RS17325	0.54	+0.1
3,941,445	-		PFLU_RS17325	0.55	-0.4
3,941,445	-		PFLU_RS17325	0.55	+0.7
3,941,445	-		PFLU_RS17325	0.55	-0.2
3,941,511	+		PFLU_RS17325	0.63	-0.3
3,941,512	-		PFLU_RS17325	0.63	-1.5
3,941,512	-		PFLU_RS17325	0.63	+1.1
3,941,578	+		PFLU_RS17325	0.71	+0.8
3,941,578	+		PFLU_RS17325	0.71	+0.3
3,941,579	-		PFLU_RS17325	0.71	+0.5
3,941,579	-		PFLU_RS17325	0.71	+0.2
3,941,579	-		PFLU_RS17325	0.71	+1.0
3,941,649	+		PFLU_RS17325	0.80	+0.6
3,941,649	+		PFLU_RS17325	0.80	+1.2
3,941,650	-		PFLU_RS17325	0.80	+0.7
3,941,650	-		PFLU_RS17325	0.80	-1.6
3,941,676	-		PFLU_RS17325	0.83	+0.5
3,941,676	-		PFLU_RS17325	0.83	+0.6
3,941,705	+		PFLU_RS17325	0.86	-1.0
3,941,706	-		PFLU_RS17325	0.87	+1.5
3,941,706	-		PFLU_RS17325	0.87	+0.0
3,941,706	-		PFLU_RS17325	0.87	-0.4
3,941,706	-		PFLU_RS17325	0.87	-0.0
3,941,706	-		PFLU_RS17325	0.87	+0.5
3,942,035	+		PFLU_RS17330	0.20	-0.9
3,942,036	-		PFLU_RS17330	0.20	-0.1
3,942,150	+		PFLU_RS17330	0.30	+0.4
3,942,150	+		PFLU_RS17330	0.30	+0.8
3,942,150	+		PFLU_RS17330	0.30	+0.2
3,942,150	+		PFLU_RS17330	0.30	-0.6
3,942,151	-		PFLU_RS17330	0.30	-0.9
3,942,258	+		PFLU_RS17330	0.40	+1.1
3,942,258	+		PFLU_RS17330	0.40	+0.8
3,942,258	+		PFLU_RS17330	0.40	-0.2
3,942,258	+		PFLU_RS17330	0.40	-0.3
3,942,258	+		PFLU_RS17330	0.40	+0.2
3,942,259	-		PFLU_RS17330	0.40	-1.8
3,942,259	-		PFLU_RS17330	0.40	+0.4
3,942,259	-		PFLU_RS17330	0.40	-0.3
3,942,259	-		PFLU_RS17330	0.40	+0.2
3,942,259	-		PFLU_RS17330	0.40	-0.3
3,942,260	+		PFLU_RS17330	0.40	-0.7
3,942,261	-		PFLU_RS17330	0.40	-1.3
3,942,411	-		PFLU_RS17330	0.53	+0.4
3,942,411	-		PFLU_RS17330	0.53	+0.9
3,942,696	-		PFLU_RS17330	0.78	-0.8
3,942,696	-		PFLU_RS17330	0.78	+0.1
3,942,696	-		PFLU_RS17330	0.78	-0.1
3,942,696	-		PFLU_RS17330	0.78	-0.2
3,942,696	-		PFLU_RS17330	0.78	-0.8
3,942,696	-		PFLU_RS17330	0.78	+0.3
3,942,698	+		PFLU_RS17330	0.78	+0.2
3,942,698	+		PFLU_RS17330	0.78	-0.0
3,942,698	+		PFLU_RS17330	0.78	+1.5
3,942,698	+		PFLU_RS17330	0.78	-0.5
3,942,699	-		PFLU_RS17330	0.78	-0.2
3,942,699	-		PFLU_RS17330	0.78	-0.4
3,942,699	-		PFLU_RS17330	0.78	-0.1
3,942,791	+		PFLU_RS17330	0.86	-1.1
3,942,792	-		PFLU_RS17330	0.86	+0.4
3,942,792	-		PFLU_RS17330	0.86	+1.4
3,942,846	+				+0.0
3,942,846	+				+0.2
3,942,846	+				+1.0
3,942,846	+				-0.5
3,942,846	+				-0.4
3,942,846	+				+0.5
3,942,846	+				+0.2
3,942,846	+				+0.6
3,942,846	+				+0.5
3,942,846	+				+0.6
3,942,847	-				+0.1
3,942,847	-				-0.8
3,942,847	-				-0.5
3,942,847	-				+0.3
3,942,847	-				-0.1
3,942,847	-				+1.1
3,942,849	-				+1.3
3,942,871	+				-0.6
3,942,871	+				-0.0
3,942,871	+				-0.1
3,942,872	-				-0.2
3,942,872	-				+0.5
3,942,945	+				+0.1
3,942,945	+				-0.8
3,942,945	+				-3.0
3,942,946	-				-0.4
3,943,244	+		PFLU_RS17335	0.38	-0.1
3,943,280	-		PFLU_RS17335	0.43	-1.2
3,943,280	-		PFLU_RS17335	0.43	+0.2
3,943,561	+		PFLU_RS17335	0.78	+0.1
3,943,561	+		PFLU_RS17335	0.78	-0.8
3,943,562	-		PFLU_RS17335	0.78	-0.2
3,943,587	+		PFLU_RS17335	0.81	-0.1
3,943,588	-		PFLU_RS17335	0.81	-0.1
3,943,588	-		PFLU_RS17335	0.81	+0.4
3,943,817	+				+0.9
3,943,817	+				+0.7
3,943,817	+				-1.1
3,943,817	+				+0.3
3,943,817	+				-0.8
3,943,817	+				+2.1
3,943,817	+				-0.9
3,943,817	+				+0.5
3,943,818	-				+0.7
3,943,818	-				-0.2
3,943,818	-				+0.7
3,943,818	-				+0.1
3,943,818	-				+0.2
3,943,818	-				-0.9