Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09810

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,158,531	-		PFLU_RS09800	0.35	+0.7
2,158,531	-		PFLU_RS09800	0.35	-0.0
2,158,548	-		PFLU_RS09800	0.41	-0.9
2,158,564	+		PFLU_RS09800	0.46	+1.0
2,158,564	+		PFLU_RS09800	0.46	+0.1
2,158,564	+		PFLU_RS09800	0.46	+0.3
2,158,564	+		PFLU_RS09800	0.46	-0.3
2,158,564	+		PFLU_RS09800	0.46	-0.5
2,158,564	+		PFLU_RS09800	0.46	-1.5
2,158,564	+		PFLU_RS09800	0.46	-1.4
2,158,565	-		PFLU_RS09800	0.47	+0.5
2,158,565	-		PFLU_RS09800	0.47	-0.7
2,158,565	-		PFLU_RS09800	0.47	+0.9
2,158,565	-		PFLU_RS09800	0.47	+0.6
2,158,629	+		PFLU_RS09800	0.68	+0.4
2,158,629	+		PFLU_RS09800	0.68	+0.9
2,158,629	+		PFLU_RS09800	0.68	+0.7
2,158,629	+		PFLU_RS09800	0.68	+0.2
2,158,630	-		PFLU_RS09800	0.68	-0.3
2,158,630	-		PFLU_RS09800	0.68	-0.6
2,158,630	-		PFLU_RS09800	0.68	+0.3
2,158,635	-		PFLU_RS09800	0.70	+0.8
2,158,635	-		PFLU_RS09800	0.70	+1.0
2,158,635	-		PFLU_RS09800	0.70	-0.5
2,158,672	-		PFLU_RS09800	0.82	+0.3
2,158,742	+				-1.9
2,158,742	+				-0.0
2,158,742	+				-0.1
2,158,742	+				+1.4
2,158,742	+				-0.1
2,158,743	-				-0.5
2,158,743	-				-0.0
2,158,743	-				+0.2
2,158,776	-				-0.0
2,158,805	+				+1.1
2,158,805	+				-0.4
2,158,806	-				+0.2
2,158,806	-				+0.2
2,158,808	+		PFLU_RS09805	0.10	+0.6
2,158,808	+		PFLU_RS09805	0.10	-2.6
2,158,808	+		PFLU_RS09805	0.10	-0.5
2,158,808	+		PFLU_RS09805	0.10	+0.9
2,158,808	+		PFLU_RS09805	0.10	+0.6
2,158,808	+		PFLU_RS09805	0.10	+0.2
2,158,808	+		PFLU_RS09805	0.10	-0.9
2,158,809	-		PFLU_RS09805	0.10	+0.2
2,158,809	-		PFLU_RS09805	0.10	+0.5
2,158,809	-		PFLU_RS09805	0.10	-1.7
2,158,809	-		PFLU_RS09805	0.10	-0.1
2,158,809	-		PFLU_RS09805	0.10	-0.4
2,158,811	+		PFLU_RS09805	0.10	+0.4
2,158,811	+		PFLU_RS09805	0.10	+0.3
2,158,811	+		PFLU_RS09805	0.10	+0.4
2,158,812	-		PFLU_RS09805	0.11	-1.1
2,158,812	-		PFLU_RS09805	0.11	-0.6
2,158,826	+		PFLU_RS09805	0.12	+0.6
2,158,827	-		PFLU_RS09805	0.13	+0.8
2,158,827	-		PFLU_RS09805	0.13	-0.1
2,158,849	+		PFLU_RS09805	0.15	+1.2
2,158,850	-		PFLU_RS09805	0.16	+0.3
2,158,897	+		PFLU_RS09805	0.22	+0.7
2,158,897	+		PFLU_RS09805	0.22	-0.2
2,158,898	-		PFLU_RS09805	0.22	+0.5
2,158,904	+		PFLU_RS09805	0.23	+0.1
2,158,905	-		PFLU_RS09805	0.23	+1.8
2,158,905	-		PFLU_RS09805	0.23	+0.1
2,158,954	+		PFLU_RS09805	0.29	+0.6
2,158,955	-		PFLU_RS09805	0.30	-0.1
2,158,955	-		PFLU_RS09805	0.30	+0.4
2,158,955	-		PFLU_RS09805	0.30	-0.1
2,158,965	-		PFLU_RS09805	0.31	+0.3
2,159,019	+		PFLU_RS09805	0.38	+0.4
2,159,219	+		PFLU_RS09805	0.65	-0.1
2,159,219	+		PFLU_RS09805	0.65	-0.2
2,159,219	+		PFLU_RS09805	0.65	+0.2
2,159,219	+		PFLU_RS09805	0.65	+0.1
2,159,219	+		PFLU_RS09805	0.65	-0.7
2,159,220	-		PFLU_RS09805	0.65	+0.6
2,159,220	-		PFLU_RS09805	0.65	-0.3
2,159,220	-		PFLU_RS09805	0.65	-0.3
2,159,222	+		PFLU_RS09805	0.65	+0.2
2,159,223	-		PFLU_RS09805	0.65	-0.3
2,159,223	-		PFLU_RS09805	0.65	+0.4
2,159,230	-		PFLU_RS09805	0.66	-0.7
2,159,378	+		PFLU_RS09805	0.86	-0.1
2,159,378	+		PFLU_RS09805	0.86	-2.0
2,159,378	+		PFLU_RS09805	0.86	+0.4
2,159,378	+		PFLU_RS09805	0.86	-0.0
2,159,379	-		PFLU_RS09805	0.86	+0.8
2,159,379	-		PFLU_RS09805	0.86	-1.0
2,159,379	-		PFLU_RS09805	0.86	-2.4
2,159,406	+		PFLU_RS09805	0.90	-0.1
2,159,407	-		PFLU_RS09805	0.90	-1.1
2,159,407	-		PFLU_RS09805	0.90	+0.6
2,159,407	-		PFLU_RS09805	0.90	-1.3
2,159,407	-		PFLU_RS09805	0.90	-0.1
2,159,412	+				+0.8
2,159,413	-				+0.3
2,159,452	+				-0.7
2,159,532	+				-1.4
2,159,533	-				-0.2
2,159,589	+				+0.4
2,159,589	+				+0.4
2,159,589	+				+0.3
2,159,589	+				+0.0
2,159,589	+				+0.1
2,159,589	+				+0.0
2,159,589	+				-0.6
2,159,589	+				-0.6
2,159,589	+				+0.2
2,159,589	+				-0.4
2,159,589	+				+0.5
2,159,590	-				-1.9
2,159,590	-				+0.9
2,159,590	-				-0.1
2,159,613	+		PFLU_RS09810	0.11	+0.2
2,159,613	+		PFLU_RS09810	0.11	-1.3
2,159,621	+		PFLU_RS09810	0.12	+0.5
2,159,621	+		PFLU_RS09810	0.12	-0.2
2,159,622	-		PFLU_RS09810	0.12	-0.8
2,159,622	-		PFLU_RS09810	0.12	+0.4
2,159,672	-		PFLU_RS09810	0.19	+0.9
2,159,672	-		PFLU_RS09810	0.19	+0.9
2,159,787	-		PFLU_RS09810	0.34	+0.5
2,159,787	-		PFLU_RS09810	0.34	+0.2
2,159,813	+		PFLU_RS09810	0.37	-0.6
2,159,813	+		PFLU_RS09810	0.37	-0.6
2,159,859	+		PFLU_RS09810	0.43	-0.2
2,159,860	-		PFLU_RS09810	0.43	+0.3
2,159,861	+		PFLU_RS09810	0.43	-1.2
2,159,861	+		PFLU_RS09810	0.43	+0.3
2,159,861	+		PFLU_RS09810	0.43	-0.8
2,159,861	+		PFLU_RS09810	0.43	+0.5
2,159,861	+		PFLU_RS09810	0.43	+0.2
2,159,861	+		PFLU_RS09810	0.43	-0.6
2,159,861	+		PFLU_RS09810	0.43	-1.2
2,159,861	+		PFLU_RS09810	0.43	+0.5
2,159,861	+		PFLU_RS09810	0.43	-0.4
2,159,861	+		PFLU_RS09810	0.43	-0.1
2,159,861	+		PFLU_RS09810	0.43	+0.2
2,159,861	+		PFLU_RS09810	0.43	+0.0
2,159,861	+		PFLU_RS09810	0.43	+0.6
2,159,861	+		PFLU_RS09810	0.43	+1.8
2,159,861	+		PFLU_RS09810	0.43	-0.5
2,159,861	+		PFLU_RS09810	0.43	-0.1
2,159,861	+		PFLU_RS09810	0.43	+0.9
2,159,861	+		PFLU_RS09810	0.43	+0.5
2,159,861	+		PFLU_RS09810	0.43	+0.1
2,159,861	+		PFLU_RS09810	0.43	-1.9
2,159,861	+		PFLU_RS09810	0.43	-0.1
2,159,862	-		PFLU_RS09810	0.43	+0.7
2,159,862	-		PFLU_RS09810	0.43	+0.7
2,159,862	-		PFLU_RS09810	0.43	-0.2
2,159,862	-		PFLU_RS09810	0.43	+0.6
2,159,862	-		PFLU_RS09810	0.43	-0.3
2,159,862	-		PFLU_RS09810	0.43	-0.5
2,159,862	-		PFLU_RS09810	0.43	-0.9
2,159,862	-		PFLU_RS09810	0.43	-0.1
2,159,862	-		PFLU_RS09810	0.43	+0.6
2,159,862	-		PFLU_RS09810	0.43	+0.6
2,159,862	-		PFLU_RS09810	0.43	+0.4
2,159,862	-		PFLU_RS09810	0.43	+0.4
2,159,862	-		PFLU_RS09810	0.43	+1.1
2,159,862	-		PFLU_RS09810	0.43	+0.3
2,159,862	-		PFLU_RS09810	0.43	+1.3
2,159,862	-		PFLU_RS09810	0.43	+0.9
2,159,862	-		PFLU_RS09810	0.43	+0.3
2,159,862	-		PFLU_RS09810	0.43	-0.2
2,159,862	-		PFLU_RS09810	0.43	-0.3
2,159,862	-		PFLU_RS09810	0.43	-0.6
2,159,862	-		PFLU_RS09810	0.43	+0.7
2,159,913	+		PFLU_RS09810	0.50	+0.0
2,159,913	+		PFLU_RS09810	0.50	+0.1
2,159,913	+		PFLU_RS09810	0.50	-0.3
2,159,913	+		PFLU_RS09810	0.50	-0.8
2,159,913	+		PFLU_RS09810	0.50	+0.2
2,159,914	-		PFLU_RS09810	0.50	+0.5
2,159,914	-		PFLU_RS09810	0.50	-0.6
2,159,935	+		PFLU_RS09810	0.53	-0.2
2,159,935	+		PFLU_RS09810	0.53	+0.0
2,159,996	+		PFLU_RS09810	0.61	+0.7
2,159,996	+		PFLU_RS09810	0.61	+0.2
2,159,996	+		PFLU_RS09810	0.61	+0.8
2,159,996	+		PFLU_RS09810	0.61	+0.3
2,159,997	-		PFLU_RS09810	0.61	-0.2
2,159,997	-		PFLU_RS09810	0.61	+0.7
2,159,997	-		PFLU_RS09810	0.61	-0.0
2,159,997	-		PFLU_RS09810	0.61	+0.4
2,159,997	-		PFLU_RS09810	0.61	-0.2
2,159,999	+		PFLU_RS09810	0.61	-0.9
2,159,999	+		PFLU_RS09810	0.61	-0.2
2,159,999	+		PFLU_RS09810	0.61	+0.3
2,160,000	-		PFLU_RS09810	0.62	-0.0
2,160,010	+		PFLU_RS09810	0.63	-0.9
2,160,011	-		PFLU_RS09810	0.63	+0.6
2,160,039	+		PFLU_RS09810	0.67	+0.3
2,160,039	+		PFLU_RS09810	0.67	-0.2
2,160,188	+		PFLU_RS09810	0.86	-0.0
2,160,188	+		PFLU_RS09810	0.86	+0.5
2,160,188	+		PFLU_RS09810	0.86	+0.3
2,160,188	+		PFLU_RS09810	0.86	-0.2
2,160,188	+		PFLU_RS09810	0.86	+0.1
2,160,189	-		PFLU_RS09810	0.86	+0.2
2,160,189	-		PFLU_RS09810	0.86	+0.0
2,160,189	-		PFLU_RS09810	0.86	+0.3
2,160,189	-		PFLU_RS09810	0.86	+1.2
2,160,189	-		PFLU_RS09810	0.86	-0.0
2,160,189	-		PFLU_RS09810	0.86	-0.6
2,160,189	-		PFLU_RS09810	0.86	+0.1
2,160,192	+		PFLU_RS09810	0.87	-0.3
2,160,192	+		PFLU_RS09810	0.87	+1.2
2,160,192	+		PFLU_RS09810	0.87	-0.0
2,160,193	-		PFLU_RS09810	0.87	-1.6
2,160,193	-		PFLU_RS09810	0.87	+0.9
2,160,200	+		PFLU_RS09810	0.88	+0.7
2,160,200	+		PFLU_RS09810	0.88	+0.4
2,160,209	+		PFLU_RS09810	0.89	-0.6
2,160,209	+		PFLU_RS09810	0.89	+1.1
2,160,209	+		PFLU_RS09810	0.89	+0.9
2,160,209	+		PFLU_RS09810	0.89	+0.3
2,160,209	+		PFLU_RS09810	0.89	-0.3
2,160,210	-		PFLU_RS09810	0.89	+0.4
2,160,210	-		PFLU_RS09810	0.89	-0.4
2,160,210	-		PFLU_RS09810	0.89	+0.6
2,160,210	-		PFLU_RS09810	0.89	+0.7
2,160,210	-		PFLU_RS09810	0.89	+1.1
2,160,210	-		PFLU_RS09810	0.89	+0.5
2,160,225	+				+0.4
2,160,278	+				-0.4
2,160,278	+				-0.7
2,160,279	-				+1.2
2,160,279	-				-0.2
2,160,279	-				+0.2
2,160,286	+				-0.2
2,160,287	-				+0.9
2,160,309	+				+0.1
2,160,309	+				-0.4
2,160,329	+				+0.2
2,160,329	+				-0.4
2,160,329	+				-0.5
2,160,329	+				-0.2
2,160,330	-				+0.2
2,160,330	-				+0.5
2,160,330	-				+0.1
2,160,330	-				-0.2
2,160,353	+				+0.7
2,160,400	+				-0.9
2,160,441	-				-2.1
2,160,549	+		PFLU_RS09815	0.18	+0.6
2,160,549	+		PFLU_RS09815	0.18	+0.2
2,160,582	+		PFLU_RS09815	0.20	+0.8
2,160,582	+		PFLU_RS09815	0.20	-0.4
2,160,582	+		PFLU_RS09815	0.20	-0.4
2,160,583	-		PFLU_RS09815	0.20	+0.8
2,160,610	+		PFLU_RS09815	0.22	+0.4
2,160,610	+		PFLU_RS09815	0.22	-2.5
2,160,610	+		PFLU_RS09815	0.22	+0.3
2,160,610	+		PFLU_RS09815	0.22	-0.8
2,160,610	+		PFLU_RS09815	0.22	-0.0
2,160,611	-		PFLU_RS09815	0.22	+0.3
2,160,611	-		PFLU_RS09815	0.22	-0.2
2,160,611	-		PFLU_RS09815	0.22	+0.2
2,160,611	-		PFLU_RS09815	0.22	+0.6
2,160,611	-		PFLU_RS09815	0.22	+0.2
2,160,731	+		PFLU_RS09815	0.31	-0.5
2,160,731	+		PFLU_RS09815	0.31	+0.0
2,160,731	+		PFLU_RS09815	0.31	-1.7
2,160,731	+		PFLU_RS09815	0.31	+0.5
2,160,731	+		PFLU_RS09815	0.31	-1.0
2,160,731	+		PFLU_RS09815	0.31	+0.9
2,160,731	+		PFLU_RS09815	0.31	-0.3
2,160,731	+		PFLU_RS09815	0.31	-0.2
2,160,731	+		PFLU_RS09815	0.31	+1.1
2,160,731	+		PFLU_RS09815	0.31	-1.1
2,160,732	-		PFLU_RS09815	0.31	+1.0
2,160,732	-		PFLU_RS09815	0.31	-3.3
2,160,732	-		PFLU_RS09815	0.31	-0.9
2,160,732	-		PFLU_RS09815	0.31	+1.2
2,160,732	-		PFLU_RS09815	0.31	+0.2
2,160,732	-		PFLU_RS09815	0.31	-0.8
2,160,732	-		PFLU_RS09815	0.31	-2.4
2,160,794	+		PFLU_RS09815	0.36	-0.3
2,160,795	-		PFLU_RS09815	0.36	-0.2
2,160,939	+		PFLU_RS09815	0.46	-0.2
2,160,940	-		PFLU_RS09815	0.47	-0.8
2,160,940	-		PFLU_RS09815	0.47	+0.3
2,160,940	-		PFLU_RS09815	0.47	+0.1
2,161,176	+		PFLU_RS09815	0.64	-0.0
2,161,176	+		PFLU_RS09815	0.64	-1.1
2,161,176	+		PFLU_RS09815	0.64	+0.6
2,161,199	+		PFLU_RS09815	0.66	-1.2
2,161,200	-		PFLU_RS09815	0.66	-1.4
2,161,213	+		PFLU_RS09815	0.67	+0.5
2,161,213	+		PFLU_RS09815	0.67	+0.5
2,161,213	+		PFLU_RS09815	0.67	+0.2
2,161,214	-		PFLU_RS09815	0.67	-0.9
2,161,225	-		PFLU_RS09815	0.67	-0.1
2,161,239	+		PFLU_RS09815	0.69	+0.7
2,161,239	+		PFLU_RS09815	0.69	-0.3
2,161,239	+		PFLU_RS09815	0.69	+0.7
2,161,239	+		PFLU_RS09815	0.69	+0.3
2,161,239	+		PFLU_RS09815	0.69	-0.3
2,161,239	+		PFLU_RS09815	0.69	+0.4
2,161,240	-		PFLU_RS09815	0.69	+0.1
2,161,240	-		PFLU_RS09815	0.69	+0.1
2,161,240	-		PFLU_RS09815	0.69	+0.5
2,161,240	-		PFLU_RS09815	0.69	-0.3
2,161,240	-		PFLU_RS09815	0.69	+0.4
2,161,240	-		PFLU_RS09815	0.69	+1.6
2,161,240	-		PFLU_RS09815	0.69	-0.3
2,161,240	-		PFLU_RS09815	0.69	+0.2