Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08730

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,939,007	+				+0.9
1,939,030	+				+0.4
1,939,031	-				+1.5
1,939,119	-				-1.1
1,939,293	+		PFLU_RS08725	0.20	+0.3
1,939,293	+		PFLU_RS08725	0.20	-0.2
1,939,293	+		PFLU_RS08725	0.20	-0.2
1,939,293	+		PFLU_RS08725	0.20	-0.4
1,939,294	-		PFLU_RS08725	0.21	-0.0
1,939,294	-		PFLU_RS08725	0.21	-0.6
1,939,297	+		PFLU_RS08725	0.21	-0.5
1,939,297	+		PFLU_RS08725	0.21	-0.3
1,939,297	+		PFLU_RS08725	0.21	-0.5
1,939,297	+		PFLU_RS08725	0.21	+0.1
1,939,297	+		PFLU_RS08725	0.21	+0.2
1,939,297	+		PFLU_RS08725	0.21	-0.1
1,939,297	+		PFLU_RS08725	0.21	+0.3
1,939,297	+		PFLU_RS08725	0.21	-0.2
1,939,297	+		PFLU_RS08725	0.21	-0.2
1,939,297	+		PFLU_RS08725	0.21	+1.1
1,939,297	+		PFLU_RS08725	0.21	+0.3
1,939,297	+		PFLU_RS08725	0.21	+0.2
1,939,298	-		PFLU_RS08725	0.21	+0.5
1,939,298	-		PFLU_RS08725	0.21	-0.4
1,939,298	-		PFLU_RS08725	0.21	-1.9
1,939,298	-		PFLU_RS08725	0.21	-0.2
1,939,298	-		PFLU_RS08725	0.21	+0.1
1,939,298	-		PFLU_RS08725	0.21	-0.0
1,939,298	-		PFLU_RS08725	0.21	+0.3
1,939,298	-		PFLU_RS08725	0.21	+0.3
1,939,298	-		PFLU_RS08725	0.21	-1.6
1,939,298	-		PFLU_RS08725	0.21	+1.0
1,939,298	-		PFLU_RS08725	0.21	+0.2
1,939,298	-		PFLU_RS08725	0.21	-0.1
1,939,298	-		PFLU_RS08725	0.21	+0.3
1,939,298	-		PFLU_RS08725	0.21	+0.1
1,939,298	-		PFLU_RS08725	0.21	-0.7
1,939,298	-		PFLU_RS08725	0.21	+0.7
1,939,418	+		PFLU_RS08725	0.35	-0.4
1,939,418	+		PFLU_RS08725	0.35	-0.6
1,939,419	-		PFLU_RS08725	0.35	+0.1
1,939,419	-		PFLU_RS08725	0.35	+0.4
1,939,482	-		PFLU_RS08725	0.42	-0.5
1,939,510	+		PFLU_RS08725	0.46	+0.4
1,939,537	-		PFLU_RS08725	0.49	+0.9
1,939,550	+		PFLU_RS08725	0.50	-0.5
1,939,550	+		PFLU_RS08725	0.50	+0.2
1,939,551	-		PFLU_RS08725	0.50	+0.8
1,939,695	+		PFLU_RS08725	0.67	-2.0
1,939,695	+		PFLU_RS08725	0.67	+0.5
1,939,695	+		PFLU_RS08725	0.67	-0.1
1,939,695	+		PFLU_RS08725	0.67	+0.8
1,939,695	+		PFLU_RS08725	0.67	-0.2
1,939,695	+		PFLU_RS08725	0.67	+0.5
1,939,695	+		PFLU_RS08725	0.67	-0.1
1,939,696	-		PFLU_RS08725	0.67	-0.1
1,939,696	-		PFLU_RS08725	0.67	-0.5
1,939,696	-		PFLU_RS08725	0.67	-0.1
1,939,768	+		PFLU_RS08725	0.76	+1.0
1,939,769	-		PFLU_RS08725	0.76	+0.2
1,939,782	+		PFLU_RS08725	0.77	-0.2
1,939,782	+		PFLU_RS08725	0.77	-0.1
1,939,782	+		PFLU_RS08725	0.77	+0.4
1,939,782	+		PFLU_RS08725	0.77	+1.1
1,939,782	+		PFLU_RS08725	0.77	-0.5
1,939,783	-		PFLU_RS08725	0.77	+0.6
1,939,783	-		PFLU_RS08725	0.77	-2.9
1,939,783	-		PFLU_RS08725	0.77	+0.9
1,939,783	-		PFLU_RS08725	0.77	+0.4
1,939,797	+		PFLU_RS08725	0.79	-0.8
1,939,798	-		PFLU_RS08725	0.79	+0.3
1,939,867	-		PFLU_RS08725	0.87	-0.2
1,939,910	-				+1.0
1,939,910	-				-1.4
1,939,910	-				-0.2
1,939,990	+				+0.5
1,939,990	+				+0.3
1,939,990	+				-0.4
1,939,990	+				+0.8
1,939,990	+				-0.1
1,939,990	+				+0.8
1,939,990	+				+1.1
1,939,990	+				+0.0
1,939,990	+				+0.4
1,939,990	+				+1.2
1,939,990	+				-0.8
1,939,991	-				+0.2
1,939,991	-				-0.8
1,939,991	-				+0.2
1,939,991	-				-0.1
1,939,993	+				+0.1
1,939,993	+				-1.5
1,939,993	+				+1.1
1,939,993	+				+0.4
1,939,994	-				-1.0
1,940,029	+				-0.4
1,940,030	-				+1.1
1,940,095	+				-0.3
1,940,095	+				-0.4
1,940,096	-				-0.1
1,940,096	-				+0.9
1,940,096	-				+0.3
1,940,099	+				-0.5
1,940,099	+				+0.1
1,940,100	-				+0.5
1,940,134	+		PFLU_RS08730	0.11	-0.0
1,940,134	+		PFLU_RS08730	0.11	+0.3
1,940,142	+		PFLU_RS08730	0.12	-1.2
1,940,142	+		PFLU_RS08730	0.12	-0.8
1,940,143	-		PFLU_RS08730	0.12	-0.2
1,940,143	-		PFLU_RS08730	0.12	+0.6
1,940,161	+		PFLU_RS08730	0.13	-1.1
1,940,162	-		PFLU_RS08730	0.13	-0.1
1,940,162	-		PFLU_RS08730	0.13	+0.7
1,940,299	+		PFLU_RS08730	0.23	-0.2
1,940,299	+		PFLU_RS08730	0.23	+1.0
1,940,299	+		PFLU_RS08730	0.23	-0.4
1,940,299	+		PFLU_RS08730	0.23	+0.5
1,940,299	+		PFLU_RS08730	0.23	-0.3
1,940,299	+		PFLU_RS08730	0.23	-0.2
1,940,299	+		PFLU_RS08730	0.23	-0.4
1,940,299	+		PFLU_RS08730	0.23	+0.5
1,940,299	+		PFLU_RS08730	0.23	-0.8
1,940,300	-		PFLU_RS08730	0.23	+0.6
1,940,300	-		PFLU_RS08730	0.23	+0.1
1,940,300	-		PFLU_RS08730	0.23	-0.0
1,940,300	-		PFLU_RS08730	0.23	-0.0
1,940,300	-		PFLU_RS08730	0.23	+0.9
1,940,300	-		PFLU_RS08730	0.23	-0.2
1,940,300	-		PFLU_RS08730	0.23	-0.7
1,940,300	-		PFLU_RS08730	0.23	+0.0
1,940,338	+		PFLU_RS08730	0.25	+0.3
1,940,338	+		PFLU_RS08730	0.25	+0.6
1,940,338	+		PFLU_RS08730	0.25	+0.4
1,940,338	+		PFLU_RS08730	0.25	-0.8
1,940,338	+		PFLU_RS08730	0.25	+0.2
1,940,339	-		PFLU_RS08730	0.25	+0.7
1,940,339	-		PFLU_RS08730	0.25	-0.5
1,940,339	-		PFLU_RS08730	0.25	-1.5
1,940,339	-		PFLU_RS08730	0.25	+1.5
1,940,339	-		PFLU_RS08730	0.25	-1.1
1,940,367	+		PFLU_RS08730	0.27	+0.5
1,940,421	+		PFLU_RS08730	0.31	-0.7
1,940,422	-		PFLU_RS08730	0.31	-0.3
1,940,435	+		PFLU_RS08730	0.32	+1.5
1,940,436	-		PFLU_RS08730	0.32	-1.1
1,940,557	+		PFLU_RS08730	0.41	-0.0
1,940,557	+		PFLU_RS08730	0.41	-0.2
1,940,558	-		PFLU_RS08730	0.41	+0.1
1,940,558	-		PFLU_RS08730	0.41	+0.0
1,940,613	-		PFLU_RS08730	0.45	-0.2
1,940,700	+		PFLU_RS08730	0.51	-0.7
1,940,700	+		PFLU_RS08730	0.51	+0.8
1,940,700	+		PFLU_RS08730	0.51	+0.6
1,940,701	-		PFLU_RS08730	0.51	+0.3
1,940,919	+		PFLU_RS08730	0.66	-0.2
1,940,919	+		PFLU_RS08730	0.66	-1.1
1,940,919	+		PFLU_RS08730	0.66	-0.4
1,940,919	+		PFLU_RS08730	0.66	-0.4
1,940,920	-		PFLU_RS08730	0.66	+0.2
1,940,961	+		PFLU_RS08730	0.69	-0.2
1,941,013	+		PFLU_RS08730	0.72	-0.8
1,941,013	+		PFLU_RS08730	0.72	-0.3
1,941,025	+		PFLU_RS08730	0.73	-0.4
1,941,026	-		PFLU_RS08730	0.73	+0.7
1,941,026	-		PFLU_RS08730	0.73	+0.7
1,941,026	-		PFLU_RS08730	0.73	+0.2
1,941,038	+		PFLU_RS08730	0.74	+0.1
1,941,038	+		PFLU_RS08730	0.74	+0.8
1,941,038	+		PFLU_RS08730	0.74	+0.9
1,941,038	+		PFLU_RS08730	0.74	-0.9
1,941,039	-		PFLU_RS08730	0.74	-1.0
1,941,039	-		PFLU_RS08730	0.74	+1.2
1,941,039	-		PFLU_RS08730	0.74	+0.9
1,941,039	-		PFLU_RS08730	0.74	-1.3
1,941,039	-		PFLU_RS08730	0.74	+0.9
1,941,039	-		PFLU_RS08730	0.74	+0.4
1,941,048	-		PFLU_RS08730	0.75	+0.7
1,941,055	+		PFLU_RS08730	0.75	-0.4
1,941,055	+		PFLU_RS08730	0.75	+0.5
1,941,055	+		PFLU_RS08730	0.75	-2.4
1,941,056	-		PFLU_RS08730	0.75	+0.6
1,941,056	-		PFLU_RS08730	0.75	+0.6
1,941,056	-		PFLU_RS08730	0.75	-0.2
1,941,137	+		PFLU_RS08730	0.81	+0.3
1,941,137	+		PFLU_RS08730	0.81	+0.0
1,941,137	+		PFLU_RS08730	0.81	-0.3
1,941,138	-		PFLU_RS08730	0.81	-2.5
1,941,138	-		PFLU_RS08730	0.81	-0.2
1,941,138	-		PFLU_RS08730	0.81	-0.2
1,941,200	+		PFLU_RS08730	0.85	+0.3
1,941,201	-		PFLU_RS08730	0.86	+0.8
1,941,299	+				-0.7
1,941,300	-				-0.4
1,941,330	+				+0.0
1,941,331	-				+0.7
1,941,331	-				+0.5
1,941,331	-				+0.8
1,941,352	+				-0.4
1,941,352	+				-1.4
1,941,359	+				-0.3
1,941,384	+				+0.6
1,941,387	+				-0.1
1,941,387	+				+0.2
1,941,387	+				+0.7
1,941,387	+				-0.7
1,941,387	+				+0.2
1,941,388	-				-0.3
1,941,388	-				+1.4
1,941,388	-				+0.8
1,941,393	+				+0.3
1,941,393	+				+0.2
1,941,393	+				-0.4
1,941,393	+				+0.5
1,941,393	+				-1.6
1,941,393	+				-0.5
1,941,394	-				-1.8
1,941,394	-				-1.6
1,941,394	-				+0.7
1,941,394	-				+0.7
1,941,412	+				+1.1
1,941,412	+				-0.6
1,941,412	+				+0.2
1,941,412	+				-0.2
1,941,412	+				-0.0
1,941,412	+				-0.2
1,941,412	+				+1.4
1,941,412	+				+0.5
1,941,413	-				-0.7
1,941,413	-				-0.8
1,941,413	-				-1.8
1,941,413	-				-0.9
1,941,413	-				+0.1
1,941,413	-				-0.3
1,941,413	-				+0.2
1,941,413	-				+0.9
1,941,420	+				-0.8
1,941,421	-				+0.1
1,941,425	+				-0.1
1,941,425	+				-0.5
1,941,425	+				+0.6
1,941,426	-				+0.5
1,941,426	-				-1.0
1,941,430	-				+0.0
1,941,430	-				+0.3
1,941,436	+				-0.3
1,941,436	+				-0.5
1,941,436	+				-1.0
1,941,436	+				+0.1
1,941,437	-				+0.6
1,941,437	-				-0.6
1,941,439	-				-0.4
1,941,460	+				+0.1
1,941,460	+				+0.4
1,941,461	-				+0.2
1,941,461	-				-0.5
1,941,482	+				-0.1
1,941,482	+				+1.2
1,941,482	+				-0.5
1,941,482	+				+0.4
1,941,483	-				-1.5
1,941,483	-				-2.2
1,941,489	+				-0.4
1,941,489	+				+0.4
1,941,490	-				+0.1
1,941,490	-				+1.9
1,941,490	-				+0.4
1,941,526	+				-0.3
1,941,547	+				-1.1
1,941,547	+				+0.9
1,941,547	+				-0.9
1,941,547	+				-0.1
1,941,548	-				+0.4
1,941,548	-				+1.5
1,941,572	+				+0.2
1,941,572	+				+0.5
1,941,572	+				+0.1
1,941,572	+				-0.8
1,941,573	-				+0.3
1,941,573	-				+0.3
1,941,586	+				+0.1
1,941,587	-				+0.5
1,941,625	+				+0.4
1,941,625	+				-0.1
1,941,626	-				+1.4
1,941,657	+				+0.6
1,941,657	+				+1.0
1,941,658	-				+0.0
1,941,721	-				-1.4
1,941,758	+				+0.2
1,941,758	+				-0.3
1,941,758	+				-0.0
1,941,759	-				-0.2
1,941,933	+		PFLU_RS08735	0.73	-0.0
1,941,934	-		PFLU_RS08735	0.74	+0.3
1,942,272	+				+1.3
1,942,272	+				+0.7
1,942,272	+				-1.7
1,942,272	+				-0.5
1,942,272	+				+0.2
1,942,272	+				+0.6
1,942,272	+				-0.6
1,942,272	+				-0.9
1,942,272	+				-0.1
1,942,272	+				+0.4
1,942,273	-				-0.3
1,942,273	-				-0.2
1,942,273	-				+0.1
1,942,275	+				+0.5
1,942,275	+				-0.0
1,942,275	+				-1.0
1,942,275	+				+0.1
1,942,275	+				-1.0
1,942,275	+				-1.2
1,942,276	-				+0.9
1,942,276	-				-0.5
1,942,364	+				+0.3
1,942,364	+				+0.5
1,942,364	+				-0.5
1,942,364	+				+1.4
1,942,364	+				-0.3
1,942,364	+				-1.5
1,942,364	+				+1.5
1,942,364	+				+0.1
1,942,364	+				-0.3
1,942,365	-				+0.4
1,942,365	-				+0.2
1,942,365	-				-0.5
1,942,365	-				+1.3
1,942,365	-				+0.1
1,942,365	-				-1.9
1,942,365	-				-0.0
1,942,365	-				-0.2
1,942,365	-				-1.9
1,942,365	-				-0.5
1,942,365	-				-0.8
1,942,365	-				+0.8