Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06470

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,446,432	+		PFLU_RS06465	0.17	-1.0
1,446,433	-		PFLU_RS06465	0.17	-0.8
1,446,573	+		PFLU_RS06465	0.29	-1.1
1,446,573	+		PFLU_RS06465	0.29	-0.1
1,446,573	+		PFLU_RS06465	0.29	-0.2
1,446,573	+		PFLU_RS06465	0.29	+2.1
1,446,573	+		PFLU_RS06465	0.29	-0.2
1,446,573	+		PFLU_RS06465	0.29	-0.4
1,446,574	-		PFLU_RS06465	0.29	+0.2
1,446,574	-		PFLU_RS06465	0.29	+0.6
1,446,574	-		PFLU_RS06465	0.29	+0.5
1,446,574	-		PFLU_RS06465	0.29	-0.1
1,446,783	+		PFLU_RS06465	0.48	+0.2
1,446,783	+		PFLU_RS06465	0.48	-2.1
1,446,783	+		PFLU_RS06465	0.48	-0.4
1,446,784	-		PFLU_RS06465	0.48	+0.2
1,446,784	-		PFLU_RS06465	0.48	-1.1
1,446,828	+		PFLU_RS06465	0.52	+1.3
1,446,828	+		PFLU_RS06465	0.52	-0.1
1,446,828	+		PFLU_RS06465	0.52	-0.3
1,446,828	+		PFLU_RS06465	0.52	-0.2
1,446,828	+		PFLU_RS06465	0.52	+1.6
1,446,828	+		PFLU_RS06465	0.52	+1.2
1,446,828	+		PFLU_RS06465	0.52	+0.4
1,446,828	+		PFLU_RS06465	0.52	-0.5
1,446,828	+		PFLU_RS06465	0.52	+0.3
1,446,829	-		PFLU_RS06465	0.52	-0.0
1,446,829	-		PFLU_RS06465	0.52	+0.5
1,447,086	+		PFLU_RS06465	0.75	+0.2
1,447,233	-		PFLU_RS06465	0.88	-0.1
1,447,263	+				+0.4
1,447,263	+				-0.7
1,447,263	+				+1.1
1,447,263	+				-1.6
1,447,263	+				+0.4
1,447,263	+				+0.5
1,447,263	+				-1.1
1,447,263	+				+0.6
1,447,263	+				-0.7
1,447,263	+				-2.9
1,447,264	-				+0.4
1,447,264	-				+0.6
1,447,264	-				+0.8
1,447,264	-				-1.5
1,447,264	-				+0.5
1,447,264	-				+0.4
1,447,264	-				-0.0
1,447,303	+				-0.5
1,447,304	-				+0.9
1,447,304	-				-0.0
1,447,304	-				+0.8
1,447,304	-				+0.3
1,447,455	+		PFLU_RS06470	0.12	+0.3
1,447,455	+		PFLU_RS06470	0.12	-0.7
1,447,456	-		PFLU_RS06470	0.12	-1.5
1,447,456	-		PFLU_RS06470	0.12	-1.3
1,447,456	-		PFLU_RS06470	0.12	+0.4
1,447,456	-		PFLU_RS06470	0.12	+0.8
1,447,456	-		PFLU_RS06470	0.12	+0.7
1,447,498	+		PFLU_RS06470	0.18	+0.4
1,447,499	-		PFLU_RS06470	0.18	-0.3
1,447,596	+		PFLU_RS06470	0.31	-0.2
1,447,596	+		PFLU_RS06470	0.31	+0.2
1,447,596	+		PFLU_RS06470	0.31	-0.1
1,447,596	+		PFLU_RS06470	0.31	+1.4
1,447,596	+		PFLU_RS06470	0.31	+0.6
1,447,596	+		PFLU_RS06470	0.31	-1.9
1,447,597	-		PFLU_RS06470	0.32	+0.6
1,447,597	-		PFLU_RS06470	0.32	+0.4
1,447,597	-		PFLU_RS06470	0.32	-0.6
1,447,599	+		PFLU_RS06470	0.32	-0.1
1,447,600	-		PFLU_RS06470	0.32	-0.1
1,447,638	+		PFLU_RS06470	0.37	-0.5
1,447,638	+		PFLU_RS06470	0.37	-0.7
1,447,638	+		PFLU_RS06470	0.37	+0.5
1,447,638	+		PFLU_RS06470	0.37	-1.4
1,447,638	+		PFLU_RS06470	0.37	+0.5
1,447,638	+		PFLU_RS06470	0.37	-0.6
1,447,638	+		PFLU_RS06470	0.37	-0.8
1,447,638	+		PFLU_RS06470	0.37	+0.4
1,447,638	+		PFLU_RS06470	0.37	+0.1
1,447,638	+		PFLU_RS06470	0.37	-0.1
1,447,638	+		PFLU_RS06470	0.37	-0.1
1,447,638	+		PFLU_RS06470	0.37	+0.4
1,447,638	+		PFLU_RS06470	0.37	+0.1
1,447,638	+		PFLU_RS06470	0.37	+0.2
1,447,639	-		PFLU_RS06470	0.37	-0.3
1,447,639	-		PFLU_RS06470	0.37	+0.3
1,447,639	-		PFLU_RS06470	0.37	-0.1
1,447,639	-		PFLU_RS06470	0.37	-0.6
1,447,639	-		PFLU_RS06470	0.37	-0.7
1,447,639	-		PFLU_RS06470	0.37	+0.7
1,447,639	-		PFLU_RS06470	0.37	+1.2
1,447,639	-		PFLU_RS06470	0.37	+0.5
1,447,639	-		PFLU_RS06470	0.37	+0.3
1,447,639	-		PFLU_RS06470	0.37	-0.3
1,447,639	-		PFLU_RS06470	0.37	-0.7
1,447,639	-		PFLU_RS06470	0.37	-0.0
1,447,644	+		PFLU_RS06470	0.38	-1.1
1,447,644	+		PFLU_RS06470	0.38	+0.0
1,447,644	+		PFLU_RS06470	0.38	+0.0
1,447,644	+		PFLU_RS06470	0.38	-0.9
1,447,644	+		PFLU_RS06470	0.38	-0.2
1,447,644	+		PFLU_RS06470	0.38	+0.7
1,447,644	+		PFLU_RS06470	0.38	+0.9
1,447,644	+		PFLU_RS06470	0.38	+0.5
1,447,644	+		PFLU_RS06470	0.38	-0.0
1,447,645	-		PFLU_RS06470	0.38	-1.6
1,447,645	-		PFLU_RS06470	0.38	+0.6
1,447,645	-		PFLU_RS06470	0.38	-0.1
1,447,645	-		PFLU_RS06470	0.38	+1.0
1,447,645	-		PFLU_RS06470	0.38	-1.3
1,447,645	-		PFLU_RS06470	0.38	-0.3
1,447,645	-		PFLU_RS06470	0.38	-0.1
1,447,645	-		PFLU_RS06470	0.38	+0.1
1,447,645	-		PFLU_RS06470	0.38	-0.9
1,447,645	-		PFLU_RS06470	0.38	+0.1
1,447,645	-		PFLU_RS06470	0.38	+0.8
1,447,737	+		PFLU_RS06470	0.51	+0.6
1,447,836	+		PFLU_RS06470	0.65	+1.0
1,447,836	+		PFLU_RS06470	0.65	+0.8
1,447,836	+		PFLU_RS06470	0.65	-0.2
1,447,836	+		PFLU_RS06470	0.65	+0.1
1,447,836	+		PFLU_RS06470	0.65	+0.0
1,447,836	+		PFLU_RS06470	0.65	-0.7
1,447,836	+		PFLU_RS06470	0.65	+1.3
1,447,836	+		PFLU_RS06470	0.65	-0.3
1,447,837	-		PFLU_RS06470	0.65	-0.3
1,447,837	-		PFLU_RS06470	0.65	+0.7
1,447,837	-		PFLU_RS06470	0.65	+0.7
1,447,837	-		PFLU_RS06470	0.65	-0.4
1,447,837	-		PFLU_RS06470	0.65	-0.1
1,447,848	+		PFLU_RS06470	0.67	-0.4
1,447,867	+		PFLU_RS06470	0.69	+0.0
1,447,867	+		PFLU_RS06470	0.69	+0.5
1,447,869	+		PFLU_RS06470	0.70	+0.1
1,447,869	+		PFLU_RS06470	0.70	+0.2
1,447,869	+		PFLU_RS06470	0.70	-0.4
1,447,869	+		PFLU_RS06470	0.70	-0.4
1,447,869	+		PFLU_RS06470	0.70	+0.1
1,447,869	+		PFLU_RS06470	0.70	+0.4
1,447,869	+		PFLU_RS06470	0.70	+0.6
1,447,869	+		PFLU_RS06470	0.70	+0.6
1,447,869	+		PFLU_RS06470	0.70	-0.2
1,447,869	+		PFLU_RS06470	0.70	-0.1
1,447,870	-		PFLU_RS06470	0.70	-1.8
1,447,870	-		PFLU_RS06470	0.70	-0.0
1,447,870	-		PFLU_RS06470	0.70	+0.3
1,447,870	-		PFLU_RS06470	0.70	-0.8
1,447,870	-		PFLU_RS06470	0.70	+0.8
1,447,870	-		PFLU_RS06470	0.70	+0.4
1,447,870	-		PFLU_RS06470	0.70	-0.3
1,447,870	-		PFLU_RS06470	0.70	+0.9
1,447,870	-		PFLU_RS06470	0.70	+0.1
1,447,870	-		PFLU_RS06470	0.70	+0.6
1,447,870	-		PFLU_RS06470	0.70	+0.1
1,447,893	+		PFLU_RS06470	0.73	-0.4
1,447,893	+		PFLU_RS06470	0.73	+0.3
1,447,893	+		PFLU_RS06470	0.73	+0.1
1,447,893	+		PFLU_RS06470	0.73	-0.2
1,447,893	+		PFLU_RS06470	0.73	-0.5
1,447,893	+		PFLU_RS06470	0.73	-1.9
1,447,893	+		PFLU_RS06470	0.73	+0.6
1,447,893	+		PFLU_RS06470	0.73	+0.1
1,447,894	-		PFLU_RS06470	0.73	+0.9
1,447,894	-		PFLU_RS06470	0.73	-0.2
1,447,899	+		PFLU_RS06470	0.74	+1.1
1,447,899	+		PFLU_RS06470	0.74	-0.2
1,447,899	+		PFLU_RS06470	0.74	-0.4
1,447,899	+		PFLU_RS06470	0.74	-0.1
1,447,899	+		PFLU_RS06470	0.74	-0.2
1,447,899	+		PFLU_RS06470	0.74	+0.3
1,447,900	-		PFLU_RS06470	0.74	-0.1
1,447,900	-		PFLU_RS06470	0.74	+0.5
1,447,900	-		PFLU_RS06470	0.74	-0.6
1,447,900	-		PFLU_RS06470	0.74	+0.5
1,447,900	-		PFLU_RS06470	0.74	-0.1
1,447,900	-		PFLU_RS06470	0.74	-0.9
1,447,919	+		PFLU_RS06470	0.77	-3.2
1,447,919	+		PFLU_RS06470	0.77	-0.9
1,447,919	+		PFLU_RS06470	0.77	+0.3
1,447,920	-		PFLU_RS06470	0.77	-0.6
1,448,041	+				-0.1
1,448,043	+				-0.4
1,448,043	+				-1.5
1,448,061	+				-0.5
1,448,061	+				-0.1
1,448,111	+				+0.7
1,448,111	+				+0.4
1,448,165	+		PFLU_RS06475	0.12	+0.2
1,448,165	+		PFLU_RS06475	0.12	+0.7
1,448,165	+		PFLU_RS06475	0.12	+1.3
1,448,165	+		PFLU_RS06475	0.12	+0.7
1,448,165	+		PFLU_RS06475	0.12	-0.4
1,448,165	+		PFLU_RS06475	0.12	+0.2
1,448,165	+		PFLU_RS06475	0.12	+0.3
1,448,166	-		PFLU_RS06475	0.12	-0.5
1,448,166	-		PFLU_RS06475	0.12	-0.8
1,448,166	-		PFLU_RS06475	0.12	-1.2
1,448,166	-		PFLU_RS06475	0.12	-0.7
1,448,166	-		PFLU_RS06475	0.12	-0.5
1,448,192	+		PFLU_RS06475	0.15	+0.2
1,448,192	+		PFLU_RS06475	0.15	-0.0
1,448,193	-		PFLU_RS06475	0.16	+0.0
1,448,193	-		PFLU_RS06475	0.16	-0.1
1,448,193	-		PFLU_RS06475	0.16	-1.2
1,448,193	-		PFLU_RS06475	0.16	-0.9
1,448,204	+		PFLU_RS06475	0.17	-0.3
1,448,204	+		PFLU_RS06475	0.17	+0.3
1,448,204	+		PFLU_RS06475	0.17	-0.1
1,448,204	+		PFLU_RS06475	0.17	+0.2
1,448,205	-		PFLU_RS06475	0.17	-0.4
1,448,205	-		PFLU_RS06475	0.17	-0.5
1,448,205	-		PFLU_RS06475	0.17	+0.7
1,448,205	-		PFLU_RS06475	0.17	-0.5
1,448,205	-		PFLU_RS06475	0.17	-0.1
1,448,205	-		PFLU_RS06475	0.17	+0.4
1,448,299	-		PFLU_RS06475	0.30	+0.1
1,448,349	-		PFLU_RS06475	0.37	-0.4
1,448,447	+		PFLU_RS06475	0.50	+0.5
1,448,447	+		PFLU_RS06475	0.50	+1.7
1,448,447	+		PFLU_RS06475	0.50	-0.0
1,448,447	+		PFLU_RS06475	0.50	+0.4
1,448,448	-		PFLU_RS06475	0.50	+0.4
1,448,448	-		PFLU_RS06475	0.50	-2.3
1,448,448	-		PFLU_RS06475	0.50	+1.6
1,448,448	-		PFLU_RS06475	0.50	+0.8
1,448,456	+		PFLU_RS06475	0.52	+0.2
1,448,456	+		PFLU_RS06475	0.52	-0.1
1,448,456	+		PFLU_RS06475	0.52	-0.1
1,448,456	+		PFLU_RS06475	0.52	+0.2
1,448,457	-		PFLU_RS06475	0.52	-0.9
1,448,457	-		PFLU_RS06475	0.52	+0.0
1,448,457	-		PFLU_RS06475	0.52	-0.4
1,448,457	-		PFLU_RS06475	0.52	-0.5
1,448,460	+		PFLU_RS06475	0.52	+0.4
1,448,460	+		PFLU_RS06475	0.52	+0.3
1,448,460	+		PFLU_RS06475	0.52	-0.4
1,448,461	-		PFLU_RS06475	0.52	+0.1
1,448,461	-		PFLU_RS06475	0.52	+0.1
1,448,507	+		PFLU_RS06475	0.59	+1.8
1,448,507	+		PFLU_RS06475	0.59	+0.2
1,448,507	+		PFLU_RS06475	0.59	-0.5
1,448,507	+		PFLU_RS06475	0.59	-0.5
1,448,507	+		PFLU_RS06475	0.59	+0.2
1,448,507	+		PFLU_RS06475	0.59	+1.5
1,448,508	-		PFLU_RS06475	0.59	+1.0
1,448,508	-		PFLU_RS06475	0.59	-0.9
1,448,508	-		PFLU_RS06475	0.59	-1.0
1,448,557	-		PFLU_RS06475	0.65	+0.5
1,448,557	-		PFLU_RS06475	0.65	-1.4
1,448,558	+		PFLU_RS06475	0.66	+0.3
1,448,559	-		PFLU_RS06475	0.66	+0.2
1,448,559	-		PFLU_RS06475	0.66	+0.7
1,448,612	+		PFLU_RS06475	0.73	+0.9
1,448,612	+		PFLU_RS06475	0.73	+0.3
1,448,612	+		PFLU_RS06475	0.73	+0.3
1,448,612	+		PFLU_RS06475	0.73	+1.1
1,448,612	+		PFLU_RS06475	0.73	-0.0
1,448,613	-		PFLU_RS06475	0.73	+0.7
1,448,613	-		PFLU_RS06475	0.73	+0.0
1,448,613	-		PFLU_RS06475	0.73	+0.1
1,448,718	+		PFLU_RS06475	0.88	-0.2
1,448,718	+		PFLU_RS06475	0.88	+0.3
1,448,718	+		PFLU_RS06475	0.88	-1.1
1,448,719	-		PFLU_RS06475	0.88	-2.0
1,448,719	-		PFLU_RS06475	0.88	+0.0
1,448,719	-		PFLU_RS06475	0.88	-0.2
1,448,808	+				+0.5
1,448,808	+				-0.1
1,448,808	+				-0.1
1,448,808	+				-0.1
1,448,808	+				+0.1
1,448,808	+				+0.1
1,448,808	+				-1.0
1,448,809	-				-0.2
1,448,809	-				-1.5
1,448,809	-				-0.8
1,448,809	-				+1.8
1,448,809	-				-0.6
1,448,809	-				-0.7
1,448,809	-				+0.2
1,448,809	-				+0.1
1,448,820	+				+0.5
1,448,820	+				-0.5
1,448,820	+				+0.4
1,448,820	+				+0.3
1,448,821	-				+0.1
1,448,821	-				+0.5
1,448,821	-				+0.2
1,448,821	-				+0.1
1,448,821	-				-0.4
1,448,821	-				-0.1
1,448,821	-				-0.8
1,448,821	-				-0.4
1,448,867	+				+0.1
1,448,867	+				-0.4
1,448,867	+				+0.4
1,448,867	+				-1.1
1,448,868	-				+0.5
1,448,868	-				-0.9
1,448,868	-				+0.0
1,448,880	-				-0.3
1,448,914	-				-0.1
1,448,921	+				-0.7
1,448,922	-				+0.6
1,448,922	-				+0.1
1,448,939	-				+1.3
1,448,949	+		PFLU_RS06480	0.11	-0.5
1,448,950	-		PFLU_RS06480	0.11	-1.4
1,448,950	-		PFLU_RS06480	0.11	+0.8
1,448,982	+		PFLU_RS06480	0.15	+0.4
1,449,051	-		PFLU_RS06480	0.24	-1.0