Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt guaD and ygfQ are separated by 35 nucleotides ygfQ and ygfS are separated by 35 nucleotides ygfS and ygfT overlap by 1 nucleotides
b2883: guaD - guanine deaminase (NCBI), at 3,023,788 to 3,025,107
guaD
b4464: ygfQ - predicted transporter (NCBI), at 3,025,143 to 3,026,510
ygfQ
b2886: ygfS - putative oxidoreductase, Fe-S subunit (VIMSS), at 3,026,546 to 3,027,034
ygfS
b2887: ygfT - putative oxidoreductase, Fe-S subunit (VIMSS), at 3,027,034 to 3,028,953
ygfT
Position (kb)
3025
3026
3027 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3024.199 kb on + strand, within guaD at 3024.207 kb on + strand, within guaD at 3024.217 kb on + strand, within guaD at 3024.251 kb on - strand, within guaD at 3024.251 kb on - strand, within guaD at 3024.310 kb on - strand, within guaD at 3024.310 kb on - strand, within guaD at 3024.321 kb on + strand, within guaD at 3024.321 kb on + strand, within guaD at 3024.321 kb on + strand, within guaD at 3024.418 kb on + strand, within guaD at 3024.482 kb on + strand, within guaD at 3024.490 kb on - strand, within guaD at 3024.615 kb on - strand, within guaD at 3024.668 kb on + strand, within guaD at 3024.668 kb on + strand, within guaD at 3024.676 kb on - strand, within guaD at 3025.060 kb on + strand at 3025.134 kb on - strand at 3025.138 kb on + strand at 3025.138 kb on + strand at 3025.502 kb on + strand, within ygfQ at 3025.587 kb on - strand, within ygfQ at 3025.589 kb on + strand, within ygfQ at 3025.591 kb on + strand, within ygfQ at 3025.599 kb on - strand, within ygfQ at 3025.643 kb on + strand, within ygfQ at 3025.755 kb on - strand, within ygfQ at 3025.757 kb on - strand, within ygfQ at 3025.863 kb on - strand, within ygfQ at 3025.965 kb on - strand, within ygfQ at 3025.965 kb on - strand, within ygfQ at 3026.052 kb on + strand, within ygfQ at 3026.088 kb on + strand, within ygfQ at 3026.137 kb on + strand, within ygfQ at 3026.137 kb on + strand, within ygfQ at 3026.261 kb on - strand at 3026.261 kb on - strand, within ygfQ at 3026.263 kb on + strand, within ygfQ at 3026.321 kb on + strand, within ygfQ at 3026.321 kb on + strand, within ygfQ at 3026.331 kb on + strand, within ygfQ at 3026.363 kb on - strand, within ygfQ at 3026.414 kb on - strand at 3026.467 kb on - strand at 3026.623 kb on + strand, within ygfS at 3026.641 kb on + strand, within ygfS at 3026.662 kb on + strand, within ygfS at 3026.705 kb on + strand, within ygfS at 3026.723 kb on - strand, within ygfS at 3026.800 kb on - strand, within ygfS at 3026.800 kb on - strand, within ygfS at 3026.812 kb on - strand, within ygfS at 3026.853 kb on + strand, within ygfS at 3026.947 kb on + strand, within ygfS at 3026.947 kb on + strand, within ygfS at 3027.136 kb on - strand at 3027.136 kb on - strand at 3027.184 kb on - strand at 3027.255 kb on - strand, within ygfT at 3027.255 kb on - strand, within ygfT at 3027.337 kb on + strand, within ygfT at 3027.370 kb on - strand, within ygfT at 3027.380 kb on - strand, within ygfT at 3027.407 kb on + strand, within ygfT at 3027.466 kb on - strand, within ygfT
Per-strain Table
Position Strand Gene LocusTag Fraction octanol 0.08 vol% remove 3,024,199 + guaD b2883 0.31 +2.8 3,024,207 + guaD b2883 0.32 +1.5 3,024,217 + guaD b2883 0.33 +0.9 3,024,251 - guaD b2883 0.35 -0.8 3,024,251 - guaD b2883 0.35 -3.4 3,024,310 - guaD b2883 0.40 +1.9 3,024,310 - guaD b2883 0.40 +1.1 3,024,321 + guaD b2883 0.40 +2.1 3,024,321 + guaD b2883 0.40 +0.9 3,024,321 + guaD b2883 0.40 +1.3 3,024,418 + guaD b2883 0.48 -0.7 3,024,482 + guaD b2883 0.53 -1.2 3,024,490 - guaD b2883 0.53 -0.1 3,024,615 - guaD b2883 0.63 +1.4 3,024,668 + guaD b2883 0.67 -1.4 3,024,668 + guaD b2883 0.67 -1.2 3,024,676 - guaD b2883 0.67 -2.4 3,025,060 + +1.7 3,025,134 - +0.1 3,025,138 + -2.2 3,025,138 + -1.4 3,025,502 + ygfQ b4464 0.26 -0.9 3,025,587 - ygfQ b4464 0.32 -1.2 3,025,589 + ygfQ b4464 0.33 +1.1 3,025,591 + ygfQ b4464 0.33 +2.3 3,025,599 - ygfQ b4464 0.33 +2.6 3,025,643 + ygfQ b4464 0.37 -0.6 3,025,755 - ygfQ b4464 0.45 -0.4 3,025,757 - ygfQ b4464 0.45 +0.5 3,025,863 - ygfQ b4464 0.53 -2.6 3,025,965 - ygfQ b4464 0.60 +1.2 3,025,965 - ygfQ b4464 0.60 -1.1 3,026,052 + ygfQ b4464 0.66 +1.8 3,026,088 + ygfQ b4464 0.69 +1.6 3,026,137 + ygfQ b4464 0.73 +0.6 3,026,137 + ygfQ b4464 0.73 -2.4 3,026,261 - +0.3 3,026,261 - ygfQ b4464 0.82 -0.6 3,026,263 + ygfQ b4464 0.82 -1.2 3,026,321 + ygfQ b4464 0.86 -1.5 3,026,321 + ygfQ b4464 0.86 -0.1 3,026,331 + ygfQ b4464 0.87 +1.2 3,026,363 - ygfQ b4464 0.89 +0.8 3,026,414 - -1.5 3,026,467 - -0.9 3,026,623 + ygfS b2886 0.16 +1.1 3,026,641 + ygfS b2886 0.19 +1.6 3,026,662 + ygfS b2886 0.24 -0.2 3,026,705 + ygfS b2886 0.33 +1.6 3,026,723 - ygfS b2886 0.36 +0.4 3,026,800 - ygfS b2886 0.52 +5.1 3,026,800 - ygfS b2886 0.52 +0.5 3,026,812 - ygfS b2886 0.54 +2.4 3,026,853 + ygfS b2886 0.63 +0.8 3,026,947 + ygfS b2886 0.82 +0.8 3,026,947 + ygfS b2886 0.82 -2.8 3,027,136 - -2.6 3,027,136 - +0.9 3,027,184 - +0.5 3,027,255 - ygfT b2887 0.12 +0.2 3,027,255 - ygfT b2887 0.12 -1.4 3,027,337 + ygfT b2887 0.16 -0.9 3,027,370 - ygfT b2887 0.17 +1.4 3,027,380 - ygfT b2887 0.18 +0.4 3,027,407 + ygfT b2887 0.19 +0.1 3,027,466 - ygfT b2887 0.23 -0.0
Or see this region's nucleotide sequence