Strain Fitness in Escherichia coli BW25113 around b2715
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
2,836,653 | + | ascG | b2714 | 0.37 | +0.1 |
2,836,653 | + | ascG | b2714 | 0.37 | +0.8 |
2,836,653 | + | ascG | b2714 | 0.37 | +3.6 |
2,836,653 | + | ascG | b2714 | 0.37 | +0.5 |
2,836,687 | - | ascG | b2714 | 0.41 | +0.7 |
2,836,754 | - | ascG | b2714 | 0.47 | +1.4 |
2,836,760 | + | ascG | b2714 | 0.48 | +0.0 |
2,836,768 | - | ascG | b2714 | 0.49 | +0.1 |
2,836,768 | - | ascG | b2714 | 0.49 | -0.4 |
2,836,802 | - | ascG | b2714 | 0.52 | -2.0 |
2,836,802 | - | ascG | b2714 | 0.52 | +2.0 |
2,836,810 | + | ascG | b2714 | 0.53 | +0.0 |
2,836,877 | - | ascG | b2714 | 0.59 | +1.3 |
2,837,055 | - | +0.0 | |||
2,837,099 | - | ascG | b2714 | 0.81 | +3.9 |
2,837,099 | - | ascG | b2714 | 0.81 | -1.3 |
2,837,171 | - | ascG | b2714 | 0.89 | -3.2 |
2,837,318 | + | +1.4 | |||
2,837,318 | + | -1.0 | |||
2,837,323 | - | -2.3 | |||
2,837,323 | - | +1.4 | |||
2,837,349 | - | +0.9 | |||
2,837,518 | - | -2.2 | |||
2,837,583 | - | +0.0 | |||
2,837,591 | - | -2.4 | |||
2,837,591 | - | +2.4 | |||
2,837,626 | + | +1.2 | |||
2,837,626 | + | -1.1 | |||
2,837,626 | + | -0.5 | |||
2,837,631 | - | +0.1 | |||
2,837,634 | - | -0.2 | |||
2,837,666 | + | -0.7 | |||
2,837,717 | - | ascF | b2715 | 0.12 | -1.8 |
2,837,766 | - | ascF | b2715 | 0.15 | -0.8 |
2,837,766 | - | ascF | b2715 | 0.15 | +0.3 |
2,837,804 | - | ascF | b2715 | 0.18 | +2.0 |
2,838,003 | - | ascF | b2715 | 0.31 | +1.2 |
2,838,101 | + | ascF | b2715 | 0.38 | -3.5 |
2,838,101 | + | ascF | b2715 | 0.38 | -0.9 |
2,838,120 | + | ascF | b2715 | 0.39 | +0.6 |
2,838,188 | + | ascF | b2715 | 0.44 | +0.9 |
2,838,188 | + | ascF | b2715 | 0.44 | -2.1 |
2,838,238 | + | ascF | b2715 | 0.47 | -2.5 |
2,838,238 | + | ascF | b2715 | 0.47 | -2.7 |
2,838,264 | + | ascF | b2715 | 0.49 | -1.9 |
2,838,272 | - | ascF | b2715 | 0.50 | -0.0 |
2,838,336 | - | ascF | b2715 | 0.54 | +1.9 |
2,838,388 | + | ascF | b2715 | 0.58 | +1.5 |
2,838,388 | + | ascF | b2715 | 0.58 | +1.2 |
2,838,396 | - | ascF | b2715 | 0.58 | -3.3 |
2,838,398 | + | ascF | b2715 | 0.58 | +2.0 |
2,838,533 | + | ascF | b2715 | 0.68 | -1.1 |
2,838,533 | + | ascF | b2715 | 0.68 | -3.3 |
2,838,676 | + | ascF | b2715 | 0.78 | +0.8 |
2,838,676 | + | ascF | b2715 | 0.78 | -1.6 |
2,838,786 | - | ascF | b2715 | 0.85 | -0.3 |
2,838,786 | - | ascF | b2715 | 0.85 | -1.4 |
2,838,879 | - | +2.1 | |||
2,839,120 | - | +3.4 | |||
2,839,120 | - | +0.0 | |||
2,839,234 | - | ascB | b2716 | 0.16 | -1.2 |
2,839,234 | - | ascB | b2716 | 0.16 | -2.0 |
2,839,385 | + | ascB | b2716 | 0.26 | +1.7 |
2,839,387 | + | ascB | b2716 | 0.26 | -0.8 |
2,839,407 | + | ascB | b2716 | 0.28 | +0.5 |
2,839,407 | + | ascB | b2716 | 0.28 | -0.0 |
2,839,427 | + | ascB | b2716 | 0.29 | +0.5 |
2,839,514 | + | ascB | b2716 | 0.35 | +1.3 |
2,839,520 | + | ascB | b2716 | 0.36 | +0.1 |
2,839,556 | + | ascB | b2716 | 0.38 | +2.1 |
2,839,607 | + | ascB | b2716 | 0.42 | -1.1 |
2,839,661 | - | ascB | b2716 | 0.46 | -0.4 |
2,839,893 | - | ascB | b2716 | 0.62 | -0.6 |
2,839,893 | - | ascB | b2716 | 0.62 | -0.2 |
Or see this region's nucleotide sequence