Strain Fitness in Escherichia coli BW25113 around b4067
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
4,281,018 | + | -0.0 | |||
4,281,018 | + | -0.2 | |||
4,281,024 | - | -2.7 | |||
4,281,027 | + | +2.4 | |||
4,281,046 | + | -3.4 | |||
4,281,138 | - | -0.0 | |||
4,281,223 | + | -1.8 | |||
4,281,230 | - | -2.9 | |||
4,281,230 | - | -0.7 | |||
4,281,232 | - | +1.2 | |||
4,281,243 | - | -2.7 | |||
4,281,252 | - | +0.7 | |||
4,281,252 | - | +3.0 | |||
4,281,252 | - | +1.8 | |||
4,281,255 | - | +1.0 | |||
4,281,262 | + | +0.3 | |||
4,281,262 | + | +0.3 | |||
4,281,262 | + | +0.5 | |||
4,281,267 | - | +0.6 | |||
4,281,270 | - | +0.1 | |||
4,281,281 | - | -1.7 | |||
4,281,281 | - | +1.2 | |||
4,281,282 | - | +0.2 | |||
4,281,296 | - | +0.1 | |||
4,281,296 | - | -2.6 | |||
4,281,296 | - | +0.1 | |||
4,281,296 | - | -3.2 | |||
4,281,307 | - | -0.8 | |||
4,281,308 | - | +1.1 | |||
4,281,308 | - | +0.1 | |||
4,281,318 | - | -0.5 | |||
4,281,321 | + | -1.0 | |||
4,281,334 | - | -0.8 | |||
4,281,334 | - | -0.7 | |||
4,281,341 | + | -2.4 | |||
4,281,349 | - | +2.2 | |||
4,281,349 | - | +0.6 | |||
4,281,349 | - | -0.6 | |||
4,281,349 | - | +1.2 | |||
4,281,349 | - | +0.2 | |||
4,281,349 | - | +0.8 | |||
4,281,412 | + | -0.6 | |||
4,281,420 | - | -1.6 | |||
4,281,420 | - | +1.0 | |||
4,281,503 | + | actP | b4067 | 0.14 | -0.5 |
4,281,503 | + | actP | b4067 | 0.14 | -1.2 |
4,281,506 | - | actP | b4067 | 0.14 | -0.9 |
4,281,573 | - | actP | b4067 | 0.18 | +1.8 |
4,281,573 | - | actP | b4067 | 0.18 | +1.1 |
4,281,578 | - | actP | b4067 | 0.18 | -1.6 |
4,281,756 | - | actP | b4067 | 0.29 | +0.9 |
4,281,927 | - | actP | b4067 | 0.39 | -1.2 |
4,281,934 | + | actP | b4067 | 0.40 | +1.4 |
4,282,003 | - | actP | b4067 | 0.44 | +2.3 |
4,282,033 | - | actP | b4067 | 0.46 | -0.3 |
4,282,072 | - | actP | b4067 | 0.48 | -2.9 |
4,282,094 | - | actP | b4067 | 0.50 | +0.9 |
4,282,191 | - | actP | b4067 | 0.55 | +1.1 |
4,282,191 | - | actP | b4067 | 0.55 | -3.1 |
4,282,215 | - | actP | b4067 | 0.57 | -2.5 |
4,282,215 | - | actP | b4067 | 0.57 | -1.8 |
4,282,412 | - | actP | b4067 | 0.69 | -0.5 |
4,282,531 | + | actP | b4067 | 0.76 | +1.0 |
4,282,706 | - | actP | b4067 | 0.87 | -3.1 |
4,282,718 | - | actP | b4067 | 0.87 | +2.1 |
4,282,718 | - | actP | b4067 | 0.87 | +2.6 |
4,282,738 | - | actP | b4067 | 0.89 | -2.7 |
4,282,738 | - | actP | b4067 | 0.89 | +0.3 |
4,282,740 | - | actP | b4067 | 0.89 | -1.2 |
4,282,842 | + | +1.3 | |||
4,282,864 | - | +1.6 | |||
4,282,873 | - | +1.3 | |||
4,282,909 | + | +1.7 | |||
4,282,938 | - | +1.9 | |||
4,282,990 | + | yjcH | b4068 | 0.22 | +2.4 |
4,283,005 | + | yjcH | b4068 | 0.26 | +2.5 |
4,283,013 | - | yjcH | b4068 | 0.29 | +0.9 |
4,283,013 | - | yjcH | b4068 | 0.29 | -0.2 |
4,283,013 | - | yjcH | b4068 | 0.29 | +4.4 |
4,283,050 | + | yjcH | b4068 | 0.41 | +0.9 |
4,283,121 | - | yjcH | b4068 | 0.63 | -1.3 |
4,283,212 | - | -2.2 | |||
4,283,212 | - | +2.8 | |||
4,283,218 | + | +0.2 | |||
4,283,224 | - | -0.6 | |||
4,283,224 | - | -0.7 | |||
4,283,291 | - | +3.2 | |||
4,283,315 | - | +1.5 | |||
4,283,315 | - | +0.2 | |||
4,283,395 | + | -0.5 | |||
4,283,395 | + | +0.7 | |||
4,283,423 | + | -0.8 | |||
4,283,423 | + | -0.9 | |||
4,283,514 | + | +0.8 | |||
4,283,514 | + | -0.8 | |||
4,283,595 | - | +1.2 | |||
4,283,678 | - | acs | b4069 | 0.12 | -0.8 |
4,283,678 | - | acs | b4069 | 0.12 | +2.8 |
4,283,712 | + | acs | b4069 | 0.14 | -0.3 |
4,283,749 | - | acs | b4069 | 0.16 | -1.7 |
4,283,808 | + | acs | b4069 | 0.19 | +1.2 |
4,283,855 | + | acs | b4069 | 0.21 | +0.6 |
4,283,855 | + | acs | b4069 | 0.21 | +1.1 |
4,283,865 | + | acs | b4069 | 0.22 | +0.3 |
Or see this region's nucleotide sequence