Strain Fitness in Escherichia coli BW25113 around b3433
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
3,570,832 | + | glgB | b3432 | 0.68 | -0.8 |
3,570,849 | - | glgB | b3432 | 0.69 | -0.8 |
3,570,890 | + | glgB | b3432 | 0.71 | +2.9 |
3,570,913 | - | glgB | b3432 | 0.72 | -0.5 |
3,570,941 | + | glgB | b3432 | 0.73 | -3.5 |
3,570,968 | - | glgB | b3432 | 0.74 | -0.4 |
3,571,005 | - | glgB | b3432 | 0.76 | -0.5 |
3,571,005 | - | glgB | b3432 | 0.76 | -1.6 |
3,571,036 | + | glgB | b3432 | 0.78 | -3.0 |
3,571,125 | - | glgB | b3432 | 0.82 | -0.0 |
3,571,125 | - | glgB | b3432 | 0.82 | +1.3 |
3,571,179 | - | glgB | b3432 | 0.84 | -2.0 |
3,571,179 | - | glgB | b3432 | 0.84 | -2.1 |
3,571,189 | + | glgB | b3432 | 0.85 | +1.5 |
3,571,227 | + | glgB | b3432 | 0.86 | +0.5 |
3,571,227 | + | glgB | b3432 | 0.86 | +1.9 |
3,571,269 | + | glgB | b3432 | 0.88 | -2.3 |
3,571,322 | - | -0.3 | |||
3,571,322 | - | +1.1 | |||
3,571,384 | + | -0.3 | |||
3,571,388 | - | +2.0 | |||
3,571,398 | - | -1.8 | |||
3,571,510 | + | -0.6 | |||
3,571,510 | + | +4.0 | |||
3,571,546 | + | +2.4 | |||
3,571,554 | - | -0.3 | |||
3,571,599 | - | +0.8 | |||
3,571,606 | + | -2.2 | |||
3,571,614 | - | -1.5 | |||
3,571,624 | - | -1.8 | |||
3,571,634 | - | +0.9 | |||
3,571,659 | + | +0.6 | |||
3,571,688 | - | -4.2 | |||
3,571,702 | - | +0.6 | |||
3,571,764 | - | +1.3 | |||
3,571,771 | - | +0.9 | |||
3,571,771 | - | -1.7 | |||
3,572,953 | - | -1.7 | |||
3,572,953 | - | -2.0 | |||
3,572,958 | - | -0.0 | |||
3,572,961 | + | -3.1 | |||
3,572,970 | - | +2.0 | |||
3,573,020 | + | -1.6 | |||
3,573,030 | - | +3.0 | |||
3,573,033 | - | +0.5 | |||
3,573,033 | - | -3.2 | |||
3,573,034 | + | +2.2 | |||
3,573,038 | + | +0.1 | |||
3,573,056 | + | -0.2 | |||
3,573,159 | - | yhgN | b3434 | 0.11 | +0.3 |
3,573,159 | - | yhgN | b3434 | 0.11 | -1.4 |
3,573,180 | - | yhgN | b3434 | 0.14 | -1.2 |
3,573,212 | - | yhgN | b3434 | 0.20 | -1.8 |
3,573,237 | + | yhgN | b3434 | 0.24 | -0.1 |
3,573,237 | + | yhgN | b3434 | 0.24 | +0.6 |
3,573,260 | - | yhgN | b3434 | 0.28 | +1.4 |
3,573,305 | - | yhgN | b3434 | 0.36 | +3.1 |
3,573,305 | - | yhgN | b3434 | 0.36 | +1.4 |
3,573,313 | + | yhgN | b3434 | 0.37 | +1.8 |
3,573,323 | + | yhgN | b3434 | 0.39 | -2.0 |
3,573,373 | + | yhgN | b3434 | 0.47 | -2.4 |
3,573,418 | - | yhgN | b3434 | 0.55 | -1.3 |
3,573,468 | + | yhgN | b3434 | 0.63 | -1.9 |
3,573,468 | + | yhgN | b3434 | 0.63 | +2.8 |
3,573,469 | - | yhgN | b3434 | 0.63 | -0.0 |
3,573,471 | + | yhgN | b3434 | 0.63 | +0.2 |
3,573,488 | - | yhgN | b3434 | 0.66 | +0.9 |
3,573,528 | - | yhgN | b3434 | 0.73 | +0.2 |
3,573,569 | + | yhgN | b3434 | 0.80 | -1.8 |
3,573,569 | + | yhgN | b3434 | 0.80 | -2.1 |
3,573,582 | + | yhgN | b3434 | 0.82 | -1.2 |
3,573,595 | - | yhgN | b3434 | 0.84 | +3.4 |
3,573,595 | - | yhgN | b3434 | 0.84 | -2.0 |
3,573,643 | + | -2.1 | |||
3,573,643 | + | -2.6 | |||
3,573,652 | + | +2.4 | |||
3,573,683 | + | +1.6 | |||
3,573,708 | + | -0.1 | |||
3,573,710 | + | -1.8 | |||
3,573,758 | - | -2.3 | |||
3,573,782 | + | -1.0 | |||
3,573,810 | - | +0.3 | |||
3,573,848 | - | -0.6 | |||
3,573,848 | - | +1.7 |
Or see this region's nucleotide sequence