Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt pabA and fic are separated by 31 nucleotides fic and yhfG overlap by 11 nucleotides yhfG and ppiA are separated by 104 nucleotides ppiA and tsgA are separated by 270 nucleotides
b3360: pabA - para-aminobenzoate synthase component II (NCBI), at 3,488,288 to 3,488,851
pabA
b3361: fic - stationary-phase protein, cell division (NCBI), at 3,488,883 to 3,489,485
fic
b3362: yhfG - hypothetical protein (NCBI), at 3,489,475 to 3,489,642
yhfG
b3363: ppiA - peptidyl-prolyl cis-trans isomerase A (rotamase A) (NCBI), at 3,489,747 to 3,490,319
ppiA
b3364: tsgA - hypothetical protein (NCBI), at 3,490,590 to 3,491,771
tsgA
Position (kb)
3489
3490
3491 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3488.796 kb on - strand at 3488.796 kb on - strand at 3488.796 kb on - strand at 3488.835 kb on + strand at 3488.888 kb on - strand at 3488.923 kb on + strand at 3488.923 kb on + strand at 3488.943 kb on - strand at 3488.949 kb on + strand, within fic at 3488.953 kb on - strand, within fic at 3488.961 kb on - strand, within fic at 3489.045 kb on + strand, within fic at 3489.079 kb on - strand, within fic at 3489.150 kb on - strand, within fic at 3489.278 kb on - strand, within fic at 3489.278 kb on - strand, within fic at 3489.341 kb on + strand, within fic at 3489.341 kb on + strand at 3489.341 kb on + strand, within fic at 3489.343 kb on - strand, within fic at 3489.427 kb on - strand at 3489.427 kb on - strand at 3489.435 kb on - strand at 3489.439 kb on - strand at 3489.499 kb on - strand, within yhfG at 3489.506 kb on - strand, within yhfG at 3489.506 kb on - strand, within yhfG at 3489.511 kb on + strand, within yhfG at 3489.511 kb on + strand, within yhfG at 3489.520 kb on - strand, within yhfG at 3489.520 kb on - strand, within yhfG at 3489.536 kb on - strand, within yhfG at 3489.536 kb on - strand, within yhfG at 3489.538 kb on + strand, within yhfG at 3489.552 kb on - strand, within yhfG at 3489.659 kb on + strand at 3489.659 kb on - strand at 3489.676 kb on + strand at 3489.700 kb on + strand at 3489.700 kb on + strand at 3489.743 kb on - strand at 3489.743 kb on - strand at 3489.753 kb on - strand at 3489.753 kb on - strand at 3489.804 kb on - strand at 3489.804 kb on - strand at 3489.804 kb on - strand at 3489.804 kb on - strand at 3489.806 kb on + strand, within ppiA at 3489.806 kb on + strand, within ppiA at 3489.820 kb on - strand, within ppiA at 3489.820 kb on - strand, within ppiA at 3489.849 kb on + strand, within ppiA at 3489.849 kb on + strand, within ppiA at 3489.849 kb on + strand, within ppiA at 3489.857 kb on - strand, within ppiA at 3489.866 kb on - strand, within ppiA at 3489.866 kb on - strand, within ppiA at 3489.878 kb on - strand, within ppiA at 3489.878 kb on - strand, within ppiA at 3489.905 kb on + strand, within ppiA at 3489.905 kb on + strand, within ppiA at 3489.914 kb on - strand, within ppiA at 3489.916 kb on - strand, within ppiA at 3489.916 kb on - strand, within ppiA at 3489.967 kb on - strand, within ppiA at 3489.967 kb on - strand, within ppiA at 3489.989 kb on + strand, within ppiA at 3489.997 kb on - strand, within ppiA at 3489.997 kb on - strand, within ppiA at 3490.055 kb on + strand, within ppiA at 3490.115 kb on - strand, within ppiA at 3490.120 kb on + strand, within ppiA at 3490.120 kb on + strand, within ppiA at 3490.188 kb on - strand, within ppiA at 3490.201 kb on + strand, within ppiA at 3490.226 kb on - strand, within ppiA at 3490.261 kb on + strand, within ppiA at 3490.267 kb on + strand at 3490.267 kb on + strand at 3490.269 kb on + strand at 3490.348 kb on + strand at 3490.348 kb on + strand at 3490.355 kb on + strand at 3490.367 kb on + strand at 3490.367 kb on + strand at 3490.377 kb on + strand at 3490.428 kb on - strand at 3490.555 kb on - strand at 3490.555 kb on - strand at 3490.590 kb on - strand at 3490.590 kb on - strand at 3490.598 kb on + strand at 3490.607 kb on + strand at 3490.607 kb on + strand at 3490.634 kb on + strand at 3490.636 kb on + strand at 3490.636 kb on + strand at 3490.644 kb on - strand at 3490.651 kb on + strand at 3490.661 kb on - strand at 3490.724 kb on + strand, within tsgA at 3490.726 kb on + strand, within tsgA at 3490.728 kb on - strand, within tsgA at 3490.731 kb on + strand, within tsgA at 3490.731 kb on + strand, within tsgA at 3490.734 kb on - strand, within tsgA at 3490.762 kb on + strand, within tsgA at 3490.787 kb on + strand, within tsgA at 3490.787 kb on + strand, within tsgA at 3490.847 kb on - strand, within tsgA at 3490.847 kb on - strand, within tsgA at 3490.847 kb on - strand, within tsgA at 3490.881 kb on - strand, within tsgA at 3490.929 kb on - strand, within tsgA at 3490.929 kb on - strand, within tsgA at 3490.947 kb on - strand, within tsgA at 3491.022 kb on + strand, within tsgA at 3491.022 kb on - strand, within tsgA at 3491.065 kb on + strand, within tsgA at 3491.065 kb on + strand, within tsgA at 3491.068 kb on - strand, within tsgA at 3491.068 kb on - strand, within tsgA at 3491.073 kb on - strand, within tsgA at 3491.073 kb on - strand, within tsgA at 3491.073 kb on - strand, within tsgA at 3491.075 kb on + strand, within tsgA at 3491.075 kb on + strand, within tsgA at 3491.075 kb on + strand, within tsgA at 3491.083 kb on - strand, within tsgA at 3491.179 kb on + strand, within tsgA at 3491.181 kb on + strand, within tsgA at 3491.234 kb on - strand, within tsgA at 3491.253 kb on - strand, within tsgA at 3491.253 kb on - strand, within tsgA at 3491.263 kb on - strand, within tsgA at 3491.274 kb on + strand, within tsgA at 3491.274 kb on + strand, within tsgA at 3491.280 kb on + strand, within tsgA at 3491.280 kb on + strand, within tsgA at 3491.304 kb on + strand, within tsgA at 3491.315 kb on + strand, within tsgA
Per-strain Table
Position Strand Gene LocusTag Fraction octanol 0.08 vol% remove 3,488,796 - -0.8 3,488,796 - -1.4 3,488,796 - +0.7 3,488,835 + +0.5 3,488,888 - -2.1 3,488,923 + +4.4 3,488,923 + +2.7 3,488,943 - +1.2 3,488,949 + fic b3361 0.11 -1.5 3,488,953 - fic b3361 0.12 -2.1 3,488,961 - fic b3361 0.13 -0.3 3,489,045 + fic b3361 0.27 +0.1 3,489,079 - fic b3361 0.33 -1.9 3,489,150 - fic b3361 0.44 +0.1 3,489,278 - fic b3361 0.66 -2.7 3,489,278 - fic b3361 0.66 -0.5 3,489,341 + fic b3361 0.76 +2.3 3,489,341 + +0.9 3,489,341 + fic b3361 0.76 +1.9 3,489,343 - fic b3361 0.76 -0.1 3,489,427 - +2.0 3,489,427 - +0.6 3,489,435 - -0.3 3,489,439 - +0.4 3,489,499 - yhfG b3362 0.14 +2.3 3,489,506 - yhfG b3362 0.18 -2.2 3,489,506 - yhfG b3362 0.18 +2.6 3,489,511 + yhfG b3362 0.21 +1.1 3,489,511 + yhfG b3362 0.21 +1.4 3,489,520 - yhfG b3362 0.27 +1.4 3,489,520 - yhfG b3362 0.27 +1.7 3,489,536 - yhfG b3362 0.36 +1.3 3,489,536 - yhfG b3362 0.36 +0.5 3,489,538 + yhfG b3362 0.38 -0.6 3,489,552 - yhfG b3362 0.46 -1.6 3,489,659 + -2.2 3,489,659 - +1.1 3,489,676 + -2.4 3,489,700 + -1.3 3,489,700 + -0.2 3,489,743 - -2.6 3,489,743 - -1.1 3,489,753 - -2.3 3,489,753 - +0.4 3,489,804 - -1.1 3,489,804 - -1.4 3,489,804 - -2.1 3,489,804 - +0.5 3,489,806 + ppiA b3363 0.10 -2.2 3,489,806 + ppiA b3363 0.10 -2.5 3,489,820 - ppiA b3363 0.13 -0.9 3,489,820 - ppiA b3363 0.13 -1.3 3,489,849 + ppiA b3363 0.18 -2.5 3,489,849 + ppiA b3363 0.18 -2.5 3,489,849 + ppiA b3363 0.18 -1.9 3,489,857 - ppiA b3363 0.19 -1.8 3,489,866 - ppiA b3363 0.21 -2.8 3,489,866 - ppiA b3363 0.21 -2.4 3,489,878 - ppiA b3363 0.23 -1.5 3,489,878 - ppiA b3363 0.23 -1.8 3,489,905 + ppiA b3363 0.28 -2.1 3,489,905 + ppiA b3363 0.28 -2.0 3,489,914 - ppiA b3363 0.29 +0.3 3,489,916 - ppiA b3363 0.29 -1.8 3,489,916 - ppiA b3363 0.29 -1.3 3,489,967 - ppiA b3363 0.38 -1.2 3,489,967 - ppiA b3363 0.38 -2.4 3,489,989 + ppiA b3363 0.42 -0.1 3,489,997 - ppiA b3363 0.44 -3.2 3,489,997 - ppiA b3363 0.44 -2.4 3,490,055 + ppiA b3363 0.54 +0.1 3,490,115 - ppiA b3363 0.64 -3.0 3,490,120 + ppiA b3363 0.65 +0.2 3,490,120 + ppiA b3363 0.65 -1.0 3,490,188 - ppiA b3363 0.77 -3.6 3,490,201 + ppiA b3363 0.79 -1.2 3,490,226 - ppiA b3363 0.84 -1.7 3,490,261 + ppiA b3363 0.90 -2.6 3,490,267 + -0.4 3,490,267 + -2.5 3,490,269 + +0.9 3,490,348 + +0.8 3,490,348 + -1.0 3,490,355 + -3.7 3,490,367 + -0.4 3,490,367 + -1.9 3,490,377 + -1.9 3,490,428 - +0.5 3,490,555 - -0.9 3,490,555 - +0.8 3,490,590 - +1.4 3,490,590 - -1.4 3,490,598 + +1.7 3,490,607 + +0.9 3,490,607 + -1.3 3,490,634 + +0.8 3,490,636 + -0.8 3,490,636 + -0.5 3,490,644 - +2.4 3,490,651 + +0.3 3,490,661 - -2.6 3,490,724 + tsgA b3364 0.11 +0.2 3,490,726 + tsgA b3364 0.12 -1.5 3,490,728 - tsgA b3364 0.12 -0.5 3,490,731 + tsgA b3364 0.12 +1.6 3,490,731 + tsgA b3364 0.12 +0.0 3,490,734 - tsgA b3364 0.12 +1.3 3,490,762 + tsgA b3364 0.15 +2.2 3,490,787 + tsgA b3364 0.17 -1.8 3,490,787 + tsgA b3364 0.17 -0.8 3,490,847 - tsgA b3364 0.22 -0.1 3,490,847 - tsgA b3364 0.22 -1.5 3,490,847 - tsgA b3364 0.22 -1.9 3,490,881 - tsgA b3364 0.25 -1.8 3,490,929 - tsgA b3364 0.29 -0.8 3,490,929 - tsgA b3364 0.29 +0.2 3,490,947 - tsgA b3364 0.30 +2.0 3,491,022 + tsgA b3364 0.37 -2.1 3,491,022 - tsgA b3364 0.37 -3.6 3,491,065 + tsgA b3364 0.40 +0.5 3,491,065 + tsgA b3364 0.40 -2.0 3,491,068 - tsgA b3364 0.40 -1.6 3,491,068 - tsgA b3364 0.40 +0.8 3,491,073 - tsgA b3364 0.41 +0.9 3,491,073 - tsgA b3364 0.41 -1.0 3,491,073 - tsgA b3364 0.41 -1.8 3,491,075 + tsgA b3364 0.41 +1.4 3,491,075 + tsgA b3364 0.41 +0.9 3,491,075 + tsgA b3364 0.41 +0.3 3,491,083 - tsgA b3364 0.42 +0.6 3,491,179 + tsgA b3364 0.50 +2.3 3,491,181 + tsgA b3364 0.50 -2.1 3,491,234 - tsgA b3364 0.54 +0.9 3,491,253 - tsgA b3364 0.56 -0.9 3,491,253 - tsgA b3364 0.56 -1.7 3,491,263 - tsgA b3364 0.57 -1.0 3,491,274 + tsgA b3364 0.58 +1.6 3,491,274 + tsgA b3364 0.58 +0.2 3,491,280 + tsgA b3364 0.58 -3.4 3,491,280 + tsgA b3364 0.58 +1.2 3,491,304 + tsgA b3364 0.60 +1.0 3,491,315 + tsgA b3364 0.61 +0.0
Or see this region's nucleotide sequence