Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ygfQ and ygfS are separated by 35 nucleotides ygfS and ygfT overlap by 1 nucleotides
b4464: ygfQ - predicted transporter (NCBI), at 3,025,143 to 3,026,510
ygfQ
b2886: ygfS - putative oxidoreductase, Fe-S subunit (VIMSS), at 3,026,546 to 3,027,034
ygfS
b2887: ygfT - putative oxidoreductase, Fe-S subunit (VIMSS), at 3,027,034 to 3,028,953
ygfT
Position (kb)
3026
3027
3028 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3025.587 kb on - strand, within ygfQ at 3025.589 kb on + strand, within ygfQ at 3025.591 kb on + strand, within ygfQ at 3025.599 kb on - strand, within ygfQ at 3025.643 kb on + strand, within ygfQ at 3025.755 kb on - strand, within ygfQ at 3025.757 kb on - strand, within ygfQ at 3025.863 kb on - strand, within ygfQ at 3025.965 kb on - strand, within ygfQ at 3025.965 kb on - strand, within ygfQ at 3026.052 kb on + strand, within ygfQ at 3026.088 kb on + strand, within ygfQ at 3026.137 kb on + strand, within ygfQ at 3026.137 kb on + strand, within ygfQ at 3026.261 kb on - strand at 3026.261 kb on - strand, within ygfQ at 3026.263 kb on + strand, within ygfQ at 3026.321 kb on + strand, within ygfQ at 3026.321 kb on + strand, within ygfQ at 3026.331 kb on + strand, within ygfQ at 3026.363 kb on - strand, within ygfQ at 3026.414 kb on - strand at 3026.467 kb on - strand at 3026.623 kb on + strand, within ygfS at 3026.641 kb on + strand, within ygfS at 3026.662 kb on + strand, within ygfS at 3026.705 kb on + strand, within ygfS at 3026.723 kb on - strand, within ygfS at 3026.800 kb on - strand, within ygfS at 3026.800 kb on - strand, within ygfS at 3026.812 kb on - strand, within ygfS at 3026.853 kb on + strand, within ygfS at 3026.947 kb on + strand, within ygfS at 3026.947 kb on + strand, within ygfS at 3027.136 kb on - strand at 3027.136 kb on - strand at 3027.184 kb on - strand at 3027.255 kb on - strand, within ygfT at 3027.255 kb on - strand, within ygfT at 3027.337 kb on + strand, within ygfT at 3027.370 kb on - strand, within ygfT at 3027.380 kb on - strand, within ygfT at 3027.407 kb on + strand, within ygfT at 3027.466 kb on - strand, within ygfT at 3027.566 kb on + strand, within ygfT at 3027.574 kb on - strand, within ygfT at 3027.574 kb on - strand, within ygfT at 3027.635 kb on - strand, within ygfT at 3027.658 kb on + strand, within ygfT at 3027.676 kb on - strand, within ygfT at 3027.676 kb on - strand, within ygfT at 3027.687 kb on + strand, within ygfT at 3027.690 kb on - strand, within ygfT at 3027.720 kb on - strand, within ygfT at 3027.759 kb on - strand, within ygfT at 3027.870 kb on - strand, within ygfT at 3027.870 kb on - strand, within ygfT at 3027.929 kb on - strand, within ygfT at 3027.990 kb on - strand, within ygfT at 3027.990 kb on - strand, within ygfT at 3027.990 kb on - strand, within ygfT
Per-strain Table
Position Strand Gene LocusTag Fraction octanol 0.08 vol% remove 3,025,587 - ygfQ b4464 0.32 -1.2 3,025,589 + ygfQ b4464 0.33 +1.1 3,025,591 + ygfQ b4464 0.33 +2.3 3,025,599 - ygfQ b4464 0.33 +2.6 3,025,643 + ygfQ b4464 0.37 -0.6 3,025,755 - ygfQ b4464 0.45 -0.4 3,025,757 - ygfQ b4464 0.45 +0.5 3,025,863 - ygfQ b4464 0.53 -2.6 3,025,965 - ygfQ b4464 0.60 +1.2 3,025,965 - ygfQ b4464 0.60 -1.1 3,026,052 + ygfQ b4464 0.66 +1.8 3,026,088 + ygfQ b4464 0.69 +1.6 3,026,137 + ygfQ b4464 0.73 +0.6 3,026,137 + ygfQ b4464 0.73 -2.4 3,026,261 - +0.3 3,026,261 - ygfQ b4464 0.82 -0.6 3,026,263 + ygfQ b4464 0.82 -1.2 3,026,321 + ygfQ b4464 0.86 -1.5 3,026,321 + ygfQ b4464 0.86 -0.1 3,026,331 + ygfQ b4464 0.87 +1.2 3,026,363 - ygfQ b4464 0.89 +0.8 3,026,414 - -1.5 3,026,467 - -0.9 3,026,623 + ygfS b2886 0.16 +1.1 3,026,641 + ygfS b2886 0.19 +1.6 3,026,662 + ygfS b2886 0.24 -0.2 3,026,705 + ygfS b2886 0.33 +1.6 3,026,723 - ygfS b2886 0.36 +0.4 3,026,800 - ygfS b2886 0.52 +5.1 3,026,800 - ygfS b2886 0.52 +0.5 3,026,812 - ygfS b2886 0.54 +2.4 3,026,853 + ygfS b2886 0.63 +0.8 3,026,947 + ygfS b2886 0.82 +0.8 3,026,947 + ygfS b2886 0.82 -2.8 3,027,136 - -2.6 3,027,136 - +0.9 3,027,184 - +0.5 3,027,255 - ygfT b2887 0.12 +0.2 3,027,255 - ygfT b2887 0.12 -1.4 3,027,337 + ygfT b2887 0.16 -0.9 3,027,370 - ygfT b2887 0.17 +1.4 3,027,380 - ygfT b2887 0.18 +0.4 3,027,407 + ygfT b2887 0.19 +0.1 3,027,466 - ygfT b2887 0.23 -0.0 3,027,566 + ygfT b2887 0.28 +1.5 3,027,574 - ygfT b2887 0.28 -1.9 3,027,574 - ygfT b2887 0.28 -0.3 3,027,635 - ygfT b2887 0.31 +2.1 3,027,658 + ygfT b2887 0.33 +0.8 3,027,676 - ygfT b2887 0.33 +1.0 3,027,676 - ygfT b2887 0.33 -1.5 3,027,687 + ygfT b2887 0.34 +1.8 3,027,690 - ygfT b2887 0.34 -1.1 3,027,720 - ygfT b2887 0.36 +1.5 3,027,759 - ygfT b2887 0.38 +1.4 3,027,870 - ygfT b2887 0.44 +0.9 3,027,870 - ygfT b2887 0.44 -0.6 3,027,929 - ygfT b2887 0.47 +1.1 3,027,990 - ygfT b2887 0.50 -2.3 3,027,990 - ygfT b2887 0.50 +1.7 3,027,990 - ygfT b2887 0.50 -1.6
Or see this region's nucleotide sequence