Strain Fitness in Escherichia coli BW25113 around b2769
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
2,891,943 | - | -2.1 | |||
2,891,959 | + | -1.4 | |||
2,892,096 | + | ygcO | b2767 | 0.59 | -0.3 |
2,892,100 | + | ygcO | b2767 | 0.61 | -1.8 |
2,892,100 | + | ygcO | b2767 | 0.61 | -0.5 |
2,892,106 | + | ygcO | b2767 | 0.63 | -1.2 |
2,892,108 | + | ygcO | b2767 | 0.64 | +0.8 |
2,892,110 | - | ygcO | b2767 | 0.65 | +0.2 |
2,892,110 | - | ygcO | b2767 | 0.65 | -2.9 |
2,892,127 | + | ygcO | b2767 | 0.71 | +0.2 |
2,892,132 | - | ygcO | b2767 | 0.73 | +0.9 |
2,892,143 | + | ygcO | b2767 | 0.77 | -1.9 |
2,892,143 | + | ygcO | b2767 | 0.77 | +0.8 |
2,892,151 | - | ygcO | b2767 | 0.80 | +1.4 |
2,892,151 | - | ygcO | b2767 | 0.80 | +1.7 |
2,892,151 | - | ygcO | b2767 | 0.80 | +0.9 |
2,892,151 | - | ygcO | b2767 | 0.80 | +0.3 |
2,892,192 | - | -0.9 | |||
2,892,224 | + | -1.8 | |||
2,892,230 | + | +1.3 | |||
2,892,230 | + | +2.0 | |||
2,892,279 | - | ygcP | b2768 | 0.11 | +1.9 |
2,892,288 | + | ygcP | b2768 | 0.12 | -2.2 |
2,892,342 | - | ygcP | b2768 | 0.22 | -2.1 |
2,892,476 | + | ygcP | b2768 | 0.45 | +2.3 |
2,892,601 | + | ygcP | b2768 | 0.66 | +0.5 |
2,892,616 | - | ygcP | b2768 | 0.69 | -3.3 |
2,892,699 | + | ygcP | b2768 | 0.84 | +0.6 |
2,892,753 | - | +1.0 | |||
2,892,758 | + | +3.2 | |||
2,892,758 | + | +2.2 | |||
2,892,854 | - | +2.7 | |||
2,892,888 | - | +0.3 | |||
2,892,888 | - | -0.1 | |||
2,892,914 | - | -1.6 | |||
2,892,914 | - | +1.6 | |||
2,892,914 | - | +0.3 | |||
2,892,939 | + | +1.2 | |||
2,892,973 | - | -1.6 | |||
2,892,993 | - | -2.4 | |||
2,893,003 | - | +1.9 | |||
2,893,184 | + | ygcQ | b2769 | 0.28 | +0.5 |
2,893,195 | - | ygcQ | b2769 | 0.30 | -3.3 |
2,893,279 | - | ygcQ | b2769 | 0.39 | -1.3 |
2,893,284 | - | ygcQ | b2769 | 0.40 | -0.1 |
2,893,368 | - | ygcQ | b2769 | 0.50 | +0.6 |
2,893,552 | + | ygcQ | b2769 | 0.71 | -1.8 |
2,893,566 | - | ygcQ | b2769 | 0.73 | +0.3 |
2,893,636 | - | ygcQ | b2769 | 0.81 | -3.1 |
2,893,657 | - | ygcQ | b2769 | 0.83 | -2.0 |
2,893,717 | + | +1.3 | |||
2,893,825 | + | -1.2 | |||
2,893,825 | + | -0.8 | |||
2,893,883 | - | ygcR | b2770 | 0.11 | +2.2 |
2,893,891 | - | ygcR | b2770 | 0.12 | +0.1 |
2,893,896 | - | ygcR | b2770 | 0.13 | -1.4 |
2,893,959 | + | ygcR | b2770 | 0.21 | +1.2 |
2,894,040 | + | ygcR | b2770 | 0.31 | +1.8 |
2,894,040 | + | ygcR | b2770 | 0.31 | +2.3 |
2,894,141 | - | ygcR | b2770 | 0.44 | +0.3 |
2,894,260 | - | ygcR | b2770 | 0.59 | +0.4 |
2,894,334 | - | ygcR | b2770 | 0.69 | -1.9 |
2,894,334 | - | ygcR | b2770 | 0.69 | -1.6 |
2,894,362 | + | ygcR | b2770 | 0.72 | -2.2 |
2,894,372 | + | ygcR | b2770 | 0.74 | +0.7 |
2,894,372 | + | ygcR | b2770 | 0.74 | -1.0 |
2,894,373 | - | ygcR | b2770 | 0.74 | +1.4 |
2,894,373 | - | ygcR | b2770 | 0.74 | +0.4 |
2,894,500 | - | +2.3 | |||
2,894,638 | + | -2.6 | |||
2,894,756 | + | ygcS | b2771 | 0.15 | -0.5 |
Or see this region's nucleotide sequence