Strain Fitness in Escherichia coli BW25113 around b2731
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
2,851,420 | - | hypE | b2730 | 0.14 | -3.1 |
2,851,438 | - | hypE | b2730 | 0.16 | -1.2 |
2,851,468 | + | hypE | b2730 | 0.19 | -3.1 |
2,851,480 | + | hypE | b2730 | 0.20 | +0.8 |
2,851,480 | + | hypE | b2730 | 0.20 | -1.8 |
2,851,524 | - | hypE | b2730 | 0.25 | +2.8 |
2,851,538 | + | hypE | b2730 | 0.26 | -0.0 |
2,851,538 | + | hypE | b2730 | 0.26 | -1.3 |
2,851,831 | - | hypE | b2730 | 0.55 | +1.6 |
2,851,874 | + | hypE | b2730 | 0.59 | -2.7 |
2,851,892 | - | hypE | b2730 | 0.61 | -0.8 |
2,851,903 | + | hypE | b2730 | 0.62 | -0.2 |
2,851,940 | - | hypE | b2730 | 0.66 | -0.1 |
2,852,009 | - | hypE | b2730 | 0.73 | -0.9 |
2,852,024 | + | hypE | b2730 | 0.74 | +1.5 |
2,852,024 | + | hypE | b2730 | 0.74 | +1.4 |
2,852,046 | - | hypE | b2730 | 0.76 | +0.7 |
2,852,046 | - | hypE | b2730 | 0.76 | +0.2 |
2,852,108 | - | hypE | b2730 | 0.82 | +1.0 |
2,852,108 | - | hypE | b2730 | 0.82 | +1.9 |
2,852,199 | - | +1.6 | |||
2,852,199 | - | +0.3 | |||
2,852,234 | - | -0.6 | |||
2,852,234 | - | +0.4 | |||
2,852,300 | + | +1.3 | |||
2,852,300 | + | +0.7 | |||
2,852,331 | + | +3.6 | |||
2,852,331 | + | -1.1 | |||
2,852,339 | - | +0.2 | |||
2,852,364 | + | +0.6 | |||
2,852,364 | + | -2.1 | |||
2,852,428 | - | +1.4 | |||
2,852,428 | - | -0.6 | |||
2,852,457 | - | +1.9 | |||
2,852,524 | + | +0.6 | |||
2,852,612 | - | fhlA | b2731 | 0.12 | +2.0 |
2,852,696 | - | fhlA | b2731 | 0.16 | -3.6 |
2,852,796 | - | fhlA | b2731 | 0.21 | +1.5 |
2,852,853 | + | fhlA | b2731 | 0.24 | -1.1 |
2,852,866 | - | fhlA | b2731 | 0.24 | -2.7 |
2,852,866 | - | fhlA | b2731 | 0.24 | +2.4 |
2,852,896 | + | fhlA | b2731 | 0.26 | -1.5 |
2,852,962 | + | fhlA | b2731 | 0.29 | -0.5 |
2,852,962 | + | fhlA | b2731 | 0.29 | +1.9 |
2,852,962 | + | fhlA | b2731 | 0.29 | +2.3 |
2,852,990 | - | fhlA | b2731 | 0.30 | -0.8 |
2,853,030 | + | fhlA | b2731 | 0.32 | +1.9 |
2,853,167 | - | fhlA | b2731 | 0.39 | +1.5 |
2,853,183 | + | fhlA | b2731 | 0.40 | +3.0 |
2,853,183 | + | fhlA | b2731 | 0.40 | -1.5 |
2,853,230 | - | fhlA | b2731 | 0.42 | -2.6 |
2,853,251 | + | fhlA | b2731 | 0.43 | +1.1 |
2,853,298 | - | fhlA | b2731 | 0.45 | -1.3 |
2,853,298 | - | fhlA | b2731 | 0.45 | +1.7 |
2,853,462 | - | fhlA | b2731 | 0.53 | -1.7 |
2,853,518 | + | fhlA | b2731 | 0.56 | +0.4 |
2,853,526 | - | fhlA | b2731 | 0.56 | +1.7 |
2,853,526 | - | fhlA | b2731 | 0.56 | -1.4 |
2,853,869 | - | fhlA | b2731 | 0.73 | -2.5 |
2,854,040 | - | fhlA | b2731 | 0.81 | -1.8 |
2,854,040 | - | fhlA | b2731 | 0.81 | +2.8 |
2,854,115 | + | fhlA | b2731 | 0.84 | +1.2 |
2,854,129 | - | fhlA | b2731 | 0.85 | +1.9 |
2,854,131 | + | fhlA | b2731 | 0.85 | +1.6 |
2,854,192 | - | fhlA | b2731 | 0.88 | -0.8 |
2,854,260 | + | +0.4 | |||
2,854,282 | - | +0.5 | |||
2,854,529 | - | ygbA | b2732 | 0.15 | +1.8 |
2,854,552 | + | ygbA | b2732 | 0.22 | +0.7 |
2,854,586 | - | ygbA | b2732 | 0.31 | -1.6 |
2,854,622 | - | ygbA | b2732 | 0.42 | +0.4 |
2,854,652 | - | ygbA | b2732 | 0.50 | +0.1 |
2,854,652 | - | ygbA | b2732 | 0.50 | +1.1 |
2,854,984 | + | -1.9 | |||
2,854,984 | + | -2.2 | |||
2,855,167 | - | +0.4 | |||
2,855,314 | + | -0.2 | |||
2,855,314 | + | +1.2 |
Or see this region's nucleotide sequence