Strain Fitness in Escherichia coli BW25113 around b2611
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
2,745,896 | - | -1.9 | |||
2,745,896 | - | -0.2 | |||
2,745,945 | - | -0.0 | |||
2,745,945 | - | +2.7 | |||
2,746,143 | - | ypjD | b2611 | 0.20 | +1.0 |
2,746,191 | + | ypjD | b2611 | 0.26 | +0.9 |
2,746,221 | - | ypjD | b2611 | 0.30 | +2.5 |
2,746,257 | + | ypjD | b2611 | 0.34 | +2.2 |
2,746,257 | + | ypjD | b2611 | 0.34 | -1.8 |
2,746,257 | + | ypjD | b2611 | 0.34 | +0.5 |
2,746,269 | + | ypjD | b2611 | 0.36 | -2.4 |
2,746,269 | + | ypjD | b2611 | 0.36 | +0.6 |
2,746,269 | + | ypjD | b2611 | 0.36 | +1.0 |
2,746,277 | - | ypjD | b2611 | 0.37 | +2.9 |
2,746,290 | + | ypjD | b2611 | 0.39 | +0.6 |
2,746,301 | + | ypjD | b2611 | 0.40 | +1.5 |
2,746,363 | + | ypjD | b2611 | 0.48 | -1.9 |
2,746,425 | - | ypjD | b2611 | 0.56 | +0.2 |
2,746,435 | - | ypjD | b2611 | 0.57 | +2.5 |
2,746,503 | - | ypjD | b2611 | 0.66 | +1.9 |
2,746,563 | + | ypjD | b2611 | 0.73 | +1.8 |
2,746,563 | + | ypjD | b2611 | 0.73 | +1.0 |
2,746,609 | + | ypjD | b2611 | 0.79 | +2.5 |
2,746,627 | - | ypjD | b2611 | 0.81 | +0.4 |
2,746,627 | - | ypjD | b2611 | 0.81 | +2.7 |
2,746,645 | - | ypjD | b2611 | 0.83 | -2.5 |
2,746,645 | - | ypjD | b2611 | 0.83 | -2.2 |
2,746,763 | - | -1.1 | |||
2,746,804 | + | +2.2 | |||
2,746,817 | + | +0.0 | |||
2,746,817 | + | -1.9 | |||
2,746,820 | - | +1.8 | |||
2,746,957 | + | yfjD | b4461 | 0.13 | +0.9 |
2,746,981 | + | yfjD | b4461 | 0.14 | +1.4 |
2,746,985 | - | yfjD | b4461 | 0.15 | -1.1 |
2,747,009 | - | yfjD | b4461 | 0.17 | +3.2 |
2,747,018 | + | yfjD | b4461 | 0.17 | +3.6 |
2,747,152 | + | yfjD | b4461 | 0.28 | +3.0 |
2,747,315 | - | yfjD | b4461 | 0.40 | +2.4 |
2,747,315 | - | yfjD | b4461 | 0.40 | -0.3 |
2,747,324 | + | yfjD | b4461 | 0.41 | +1.4 |
2,747,332 | - | yfjD | b4461 | 0.42 | +1.0 |
2,747,414 | - | yfjD | b4461 | 0.48 | -2.3 |
2,747,414 | - | yfjD | b4461 | 0.48 | +1.3 |
2,747,503 | - | yfjD | b4461 | 0.55 | -1.6 |
2,747,503 | - | yfjD | b4461 | 0.55 | -2.9 |
2,747,554 | + | yfjD | b4461 | 0.59 | +2.6 |
2,747,647 | - | yfjD | b4461 | 0.66 | -1.0 |
2,747,647 | - | yfjD | b4461 | 0.66 | +3.5 |
2,747,654 | - | yfjD | b4461 | 0.67 | +1.6 |
2,747,717 | - | yfjD | b4461 | 0.72 | +3.1 |
2,747,740 | + | yfjD | b4461 | 0.73 | +0.3 |
2,747,765 | - | yfjD | b4461 | 0.75 | +1.0 |
Or see this region's nucleotide sequence