Strain Fitness in Escherichia coli BW25113 around b2426
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
2,540,858 | + | cysP | b2425 | 0.32 | -0.6 |
2,540,872 | + | cysP | b2425 | 0.33 | +1.7 |
2,541,064 | + | cysP | b2425 | 0.52 | +1.8 |
2,541,066 | + | cysP | b2425 | 0.52 | +1.8 |
2,541,077 | - | cysP | b2425 | 0.53 | +1.2 |
2,541,159 | + | cysP | b2425 | 0.61 | +2.3 |
2,541,181 | - | cysP | b2425 | 0.64 | +0.5 |
2,541,194 | + | cysP | b2425 | 0.65 | +1.5 |
2,541,229 | - | cysP | b2425 | 0.68 | +1.9 |
2,541,421 | - | cysP | b2425 | 0.87 | +0.9 |
2,541,621 | + | -1.3 | |||
2,541,699 | + | -0.0 | |||
2,541,733 | + | -1.6 | |||
2,542,113 | + | ucpA | b2426 | 0.33 | +0.9 |
2,542,215 | - | ucpA | b2426 | 0.46 | +2.1 |
2,542,432 | - | ucpA | b2426 | 0.73 | +2.0 |
2,542,661 | + | -0.4 | |||
2,542,661 | + | -1.6 | |||
2,542,748 | + | +0.4 | |||
2,542,796 | - | +0.1 | |||
2,542,833 | - | -0.9 | |||
2,542,833 | - | +2.1 | |||
2,543,173 | - | yfeT | b2427 | 0.47 | +1.6 |
2,543,193 | - | yfeT | b2427 | 0.49 | +0.3 |
2,543,230 | - | yfeT | b2427 | 0.53 | +1.0 |
2,543,231 | + | yfeT | b2427 | 0.53 | +0.6 |
2,543,231 | + | yfeT | b2427 | 0.53 | +0.4 |
2,543,365 | + | yfeT | b2427 | 0.69 | -2.2 |
2,543,365 | + | yfeT | b2427 | 0.69 | +3.0 |
2,543,376 | + | yfeT | b2427 | 0.70 | +0.1 |
2,543,410 | + | yfeT | b2427 | 0.74 | +0.8 |
2,543,428 | - | yfeT | b2427 | 0.76 | -1.0 |
Or see this region's nucleotide sequence