Strain Fitness in Escherichia coli BW25113 around b2131
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
2,215,683 | - | yehY | b2130 | 0.23 | -2.5 |
2,215,683 | - | yehY | b2130 | 0.23 | -2.4 |
2,215,698 | - | yehY | b2130 | 0.24 | +2.1 |
2,215,698 | - | yehY | b2130 | 0.24 | +0.5 |
2,215,701 | - | yehY | b2130 | 0.24 | +2.4 |
2,215,805 | + | yehY | b2130 | 0.33 | -1.4 |
2,215,876 | - | yehY | b2130 | 0.39 | +1.1 |
2,215,909 | - | yehY | b2130 | 0.42 | +2.1 |
2,215,909 | - | yehY | b2130 | 0.42 | -2.4 |
2,215,998 | + | yehY | b2130 | 0.50 | +0.5 |
2,216,025 | + | yehY | b2130 | 0.52 | -2.2 |
2,216,025 | + | yehY | b2130 | 0.52 | +0.3 |
2,216,209 | + | yehY | b2130 | 0.68 | +1.7 |
2,216,209 | + | yehY | b2130 | 0.68 | +1.8 |
2,216,217 | - | yehY | b2130 | 0.69 | +1.5 |
2,216,217 | - | yehY | b2130 | 0.69 | +2.5 |
2,216,355 | - | yehY | b2130 | 0.81 | +0.6 |
2,216,544 | - | -0.5 | |||
2,216,627 | + | -0.1 | |||
2,216,745 | - | yehZ | b2131 | 0.17 | +2.7 |
2,216,745 | - | yehZ | b2131 | 0.17 | -0.1 |
2,216,748 | - | yehZ | b2131 | 0.18 | +0.1 |
2,216,767 | - | yehZ | b2131 | 0.20 | -1.3 |
2,216,782 | + | yehZ | b2131 | 0.21 | +0.6 |
2,216,950 | - | yehZ | b2131 | 0.40 | -1.1 |
2,216,950 | - | yehZ | b2131 | 0.40 | -3.0 |
2,216,955 | + | yehZ | b2131 | 0.40 | -1.3 |
2,216,955 | + | yehZ | b2131 | 0.40 | -2.5 |
2,217,019 | + | yehZ | b2131 | 0.47 | -3.1 |
2,217,153 | - | yehZ | b2131 | 0.62 | +2.0 |
2,217,153 | - | yehZ | b2131 | 0.62 | -2.4 |
2,217,260 | + | yehZ | b2131 | 0.73 | +1.5 |
2,217,311 | - | yehZ | b2131 | 0.79 | -1.9 |
2,217,311 | - | yehZ | b2131 | 0.79 | -0.7 |
2,217,328 | + | yehZ | b2131 | 0.81 | +0.4 |
2,217,376 | + | yehZ | b2131 | 0.86 | +1.4 |
2,217,463 | + | +0.2 | |||
2,217,470 | + | -0.2 | |||
2,217,560 | - | +0.9 | |||
2,217,621 | - | +1.9 | |||
2,217,682 | - | +1.7 | |||
2,217,769 | + | -1.5 | |||
2,218,066 | + | bglX | b2132 | 0.15 | +0.2 |
2,218,089 | + | bglX | b2132 | 0.16 | +0.4 |
2,218,089 | + | bglX | b2132 | 0.16 | +1.0 |
2,218,305 | - | bglX | b2132 | 0.26 | +0.4 |
2,218,470 | + | bglX | b2132 | 0.33 | -1.5 |
2,218,470 | + | bglX | b2132 | 0.33 | +0.9 |
2,218,476 | - | bglX | b2132 | 0.33 | -0.9 |
2,218,476 | - | bglX | b2132 | 0.33 | -2.3 |
2,218,483 | - | bglX | b2132 | 0.33 | -0.7 |
2,218,483 | - | bglX | b2132 | 0.33 | +1.7 |
Or see this region's nucleotide sequence