Strain Fitness in Escherichia coli BW25113 around b1960
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,027,608 | + | -0.3 | |||
| 2,027,686 | + | yedA | b1959 | 0.13 | -0.4 |
| 2,027,723 | + | yedA | b1959 | 0.17 | +0.9 |
| 2,028,038 | + | yedA | b1959 | 0.52 | +0.3 |
| 2,028,081 | - | yedA | b1959 | 0.56 | -1.3 |
| 2,028,322 | + | yedA | b1959 | 0.82 | -0.2 |
| 2,028,398 | + | -2.1 | |||
| 2,028,717 | + | vsr | b1960 | 0.52 | +0.1 |
| 2,028,727 | - | vsr | b1960 | 0.54 | -0.6 |
| 2,028,727 | - | vsr | b1960 | 0.54 | -3.0 |
| 2,028,753 | + | vsr | b1960 | 0.60 | -1.1 |
| 2,028,753 | + | vsr | b1960 | 0.60 | -0.3 |
| 2,028,819 | - | vsr | b1960 | 0.74 | -0.6 |
| 2,028,819 | - | vsr | b1960 | 0.74 | -1.0 |
| 2,028,943 | + | -1.6 | |||
| 2,028,966 | + | -2.1 | |||
| 2,028,966 | - | -1.5 | |||
| 2,029,342 | + | +0.1 | |||
| 2,029,361 | - | dcm | b1961 | 0.31 | -1.3 |
Or see this region's nucleotide sequence