Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt cheA and motB are separated by 4 nucleotides motB and motA overlap by 4 nucleotides motA and flhC are separated by 126 nucleotides flhC and flhD are separated by 2 nucleotides
b1888: cheA - fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI), at 1,971,384 to 1,973,348
cheA
b1889: motB - flagellar motor protein MotB (NCBI), at 1,973,353 to 1,974,279
motB
b1890: motA - flagellar motor protein MotA (NCBI), at 1,974,276 to 1,975,163
motA
b1891: flhC - DNA-binding transcriptional dual regulator with FlhD (NCBI), at 1,975,290 to 1,975,868
flhC
b1892: flhD - DNA-binding transcriptional dual regulator with FlhC (RefSeq), at 1,975,871 to 1,976,221
flhD
Position (kb)
1974
1975
1976 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1973.279 kb on - strand at 1973.279 kb on - strand at 1973.443 kb on - strand at 1973.443 kb on - strand at 1973.577 kb on - strand, within motB at 1973.595 kb on - strand, within motB at 1973.697 kb on + strand, within motB at 1973.846 kb on - strand, within motB at 1973.850 kb on - strand, within motB at 1974.089 kb on - strand, within motB at 1974.089 kb on - strand, within motB at 1974.197 kb on + strand at 1974.226 kb on + strand at 1974.233 kb on + strand at 1974.233 kb on + strand at 1974.414 kb on + strand, within motA at 1974.854 kb on - strand, within motA at 1974.934 kb on + strand, within motA at 1974.934 kb on + strand, within motA at 1975.040 kb on + strand, within motA at 1975.092 kb on + strand at 1975.093 kb on - strand at 1975.173 kb on + strand at 1975.179 kb on + strand at 1975.179 kb on + strand at 1975.415 kb on - strand, within flhC at 1975.477 kb on + strand, within flhC at 1975.589 kb on + strand, within flhC at 1975.636 kb on + strand, within flhC at 1975.707 kb on + strand, within flhC at 1975.914 kb on - strand, within flhD at 1975.961 kb on - strand, within flhD at 1975.961 kb on - strand, within flhD at 1975.991 kb on + strand, within flhD at 1975.991 kb on - strand, within flhD at 1976.072 kb on + strand, within flhD at 1976.072 kb on + strand, within flhD at 1976.072 kb on + strand, within flhD at 1976.120 kb on + strand, within flhD at 1976.120 kb on + strand, within flhD at 1976.138 kb on + strand, within flhD at 1976.146 kb on - strand, within flhD at 1976.149 kb on - strand, within flhD at 1976.149 kb on - strand, within flhD
Per-strain Table
Position Strand Gene LocusTag Fraction octanol 0.08 vol% remove 1,973,279 - +1.8 1,973,279 - -0.1 1,973,443 - +2.6 1,973,443 - -2.2 1,973,577 - motB b1889 0.24 -0.6 1,973,595 - motB b1889 0.26 -0.2 1,973,697 + motB b1889 0.37 +0.1 1,973,846 - motB b1889 0.53 +1.6 1,973,850 - motB b1889 0.54 +1.1 1,974,089 - motB b1889 0.79 -3.1 1,974,089 - motB b1889 0.79 -1.3 1,974,197 + +1.5 1,974,226 + +1.1 1,974,233 + -2.0 1,974,233 + +0.7 1,974,414 + motA b1890 0.16 +2.6 1,974,854 - motA b1890 0.65 +0.9 1,974,934 + motA b1890 0.74 +1.6 1,974,934 + motA b1890 0.74 +1.0 1,975,040 + motA b1890 0.86 -0.8 1,975,092 + +1.0 1,975,093 - -2.7 1,975,173 + +0.0 1,975,179 + -2.9 1,975,179 + -3.3 1,975,415 - flhC b1891 0.22 +1.6 1,975,477 + flhC b1891 0.32 -1.3 1,975,589 + flhC b1891 0.52 +1.2 1,975,636 + flhC b1891 0.60 +1.4 1,975,707 + flhC b1891 0.72 +0.5 1,975,914 - flhD b1892 0.12 -2.1 1,975,961 - flhD b1892 0.26 -0.5 1,975,961 - flhD b1892 0.26 +0.2 1,975,991 + flhD b1892 0.34 +0.2 1,975,991 - flhD b1892 0.34 -1.1 1,976,072 + flhD b1892 0.57 +2.4 1,976,072 + flhD b1892 0.57 +0.5 1,976,072 + flhD b1892 0.57 +1.3 1,976,120 + flhD b1892 0.71 -1.3 1,976,120 + flhD b1892 0.71 -3.1 1,976,138 + flhD b1892 0.76 -2.1 1,976,146 - flhD b1892 0.78 -2.6 1,976,149 - flhD b1892 0.79 +1.6 1,976,149 - flhD b1892 0.79 +2.7
Or see this region's nucleotide sequence