Strain Fitness in Escherichia coli BW25113 around b1813
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
1,893,663 | + | pabB | b1812 | 0.61 | -2.5 |
1,893,663 | - | pabB | b1812 | 0.61 | +1.2 |
1,893,819 | + | pabB | b1812 | 0.73 | +1.4 |
1,893,819 | + | pabB | b1812 | 0.73 | +0.4 |
1,893,960 | - | pabB | b1812 | 0.83 | -1.8 |
1,893,960 | - | pabB | b1812 | 0.83 | +1.4 |
1,894,035 | + | pabB | b1812 | 0.89 | +1.6 |
1,894,301 | - | yeaB | b1813 | 0.18 | -2.8 |
1,894,400 | + | yeaB | b1813 | 0.36 | -2.1 |
1,894,406 | - | yeaB | b1813 | 0.37 | -1.5 |
1,894,419 | + | yeaB | b1813 | 0.39 | +0.5 |
1,894,446 | + | yeaB | b1813 | 0.44 | +2.0 |
1,894,456 | + | yeaB | b1813 | 0.45 | -2.0 |
1,894,500 | + | yeaB | b1813 | 0.53 | -2.8 |
1,894,500 | + | yeaB | b1813 | 0.53 | -2.3 |
1,894,551 | - | yeaB | b1813 | 0.62 | -3.3 |
1,894,579 | - | yeaB | b1813 | 0.66 | -3.5 |
1,894,629 | - | yeaB | b1813 | 0.75 | +1.1 |
1,894,683 | + | yeaB | b1813 | 0.84 | +1.6 |
1,894,683 | + | yeaB | b1813 | 0.84 | +0.5 |
1,894,686 | - | yeaB | b1813 | 0.85 | +0.0 |
1,894,693 | + | yeaB | b1813 | 0.86 | +2.8 |
1,894,693 | + | yeaB | b1813 | 0.86 | -1.9 |
1,894,735 | + | -0.1 | |||
1,894,766 | + | -0.8 | |||
1,894,766 | + | +2.0 | |||
1,894,804 | + | +0.5 | |||
1,894,875 | - | -1.1 | |||
1,894,875 | - | +1.7 | |||
1,894,890 | + | +0.7 | |||
1,894,890 | + | +1.1 | |||
1,894,915 | - | +0.1 | |||
1,894,961 | - | +1.7 | |||
1,894,997 | + | +1.3 | |||
1,895,002 | - | +2.0 | |||
1,895,028 | - | -2.5 | |||
1,895,028 | - | +1.5 | |||
1,895,039 | - | +1.1 | |||
1,895,039 | - | -2.1 | |||
1,895,465 | + | sdaA | b1814 | 0.37 | +1.7 |
1,895,498 | - | sdaA | b1814 | 0.40 | +3.6 |
1,895,540 | - | sdaA | b1814 | 0.43 | -0.3 |
1,895,646 | - | sdaA | b1814 | 0.51 | -1.3 |
1,895,646 | - | sdaA | b1814 | 0.51 | +2.3 |
Or see this region's nucleotide sequence