Strain Fitness in Escherichia coli BW25113 around b1522
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
1,607,936 | + | uxaB | b1521 | 0.47 | +0.6 |
1,608,074 | + | uxaB | b1521 | 0.57 | -0.2 |
1,608,074 | + | uxaB | b1521 | 0.57 | +1.9 |
1,608,119 | + | uxaB | b1521 | 0.60 | +0.3 |
1,608,272 | - | uxaB | b1521 | 0.70 | +1.5 |
1,608,469 | - | uxaB | b1521 | 0.84 | +0.4 |
1,608,664 | - | +1.5 | |||
1,608,962 | - | +1.3 | |||
1,608,994 | + | -3.1 | |||
1,609,041 | - | yneF | b1522 | 0.12 | -2.8 |
1,609,234 | - | yneF | b1522 | 0.32 | -0.7 |
1,609,408 | - | yneF | b1522 | 0.50 | +0.7 |
1,609,728 | - | yneF | b1522 | 0.84 | +1.7 |
1,609,730 | - | yneF | b1522 | 0.84 | +0.6 |
1,609,859 | - | +0.2 | |||
1,609,946 | + | -2.7 | |||
1,610,016 | + | -0.6 | |||
1,610,047 | - | yneG | b1523 | 0.16 | -1.6 |
1,610,249 | + | yneG | b1523 | 0.72 | -0.2 |
1,610,422 | - | -0.5 | |||
1,610,543 | + | yneH | b1524 | 0.21 | -3.6 |
Or see this region's nucleotide sequence