Strain Fitness in Escherichia coli BW25113 around b1224
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
1,278,184 | + | narK | b1223 | 0.72 | +2.9 |
1,278,305 | - | narK | b1223 | 0.81 | +1.1 |
1,278,309 | + | narK | b1223 | 0.81 | +1.4 |
1,278,535 | + | +2.2 | |||
1,278,535 | + | +1.2 | |||
1,278,545 | + | -1.5 | |||
1,278,545 | + | -0.1 | |||
1,278,545 | + | -3.4 | |||
1,278,545 | + | -1.0 | |||
1,278,593 | + | +3.0 | |||
1,278,646 | + | +0.1 | |||
1,278,648 | + | +2.4 | |||
1,278,648 | + | -2.3 | |||
1,278,674 | + | +1.0 | |||
1,278,674 | + | +3.0 | |||
1,278,686 | + | -0.7 | |||
1,278,686 | + | +1.4 | |||
1,278,817 | - | +0.0 | |||
1,278,845 | - | +1.7 | |||
1,278,947 | - | +0.2 | |||
1,279,014 | + | -1.1 | |||
1,279,014 | + | +0.6 | |||
1,279,022 | - | -0.7 | |||
1,279,032 | + | +2.7 | |||
1,279,032 | + | -2.1 | |||
1,279,059 | + | -0.4 | |||
1,279,169 | - | +1.1 | |||
1,279,194 | + | -0.4 | |||
1,279,373 | + | -1.7 | |||
1,279,502 | - | narG | b1224 | 0.11 | -2.4 |
1,279,616 | - | narG | b1224 | 0.14 | +1.8 |
1,279,640 | + | narG | b1224 | 0.15 | -0.1 |
1,279,846 | + | narG | b1224 | 0.20 | -2.4 |
1,279,846 | + | narG | b1224 | 0.20 | +1.7 |
1,279,986 | + | narG | b1224 | 0.24 | +1.2 |
1,279,986 | + | narG | b1224 | 0.24 | +1.0 |
1,280,077 | + | narG | b1224 | 0.26 | -0.5 |
1,280,130 | + | narG | b1224 | 0.28 | -1.6 |
1,280,170 | - | narG | b1224 | 0.29 | +0.9 |
1,280,359 | + | narG | b1224 | 0.34 | -0.4 |
1,280,473 | - | narG | b1224 | 0.37 | +2.0 |
1,280,473 | - | narG | b1224 | 0.37 | +0.0 |
1,280,489 | - | narG | b1224 | 0.37 | +2.9 |
1,280,489 | - | narG | b1224 | 0.37 | +1.1 |
1,280,523 | + | narG | b1224 | 0.38 | -0.4 |
1,280,523 | + | narG | b1224 | 0.38 | -0.4 |
1,280,800 | + | narG | b1224 | 0.46 | +2.3 |
1,280,819 | + | narG | b1224 | 0.46 | -0.4 |
1,280,819 | + | narG | b1224 | 0.46 | +1.3 |
1,280,928 | + | narG | b1224 | 0.49 | +0.8 |
1,281,059 | + | narG | b1224 | 0.53 | +2.1 |
1,281,077 | - | narG | b1224 | 0.53 | -1.1 |
1,281,090 | - | narG | b1224 | 0.53 | -0.4 |
1,281,142 | - | narG | b1224 | 0.55 | -1.1 |
1,281,227 | + | narG | b1224 | 0.57 | +0.0 |
1,281,754 | - | narG | b1224 | 0.71 | -2.9 |
1,281,799 | - | narG | b1224 | 0.72 | +0.9 |
1,281,833 | + | narG | b1224 | 0.73 | +1.8 |
1,281,833 | + | narG | b1224 | 0.73 | +0.1 |
1,281,870 | + | narG | b1224 | 0.74 | -0.9 |
1,281,881 | + | narG | b1224 | 0.75 | -0.9 |
1,281,881 | + | narG | b1224 | 0.75 | +3.6 |
1,282,127 | - | narG | b1224 | 0.81 | -0.5 |
1,282,221 | + | narG | b1224 | 0.84 | -0.8 |
1,282,221 | + | narG | b1224 | 0.84 | +0.8 |
1,282,634 | - | +0.6 | |||
1,282,810 | + | +0.3 | |||
1,282,810 | + | +0.6 | |||
1,282,856 | + | +1.3 | |||
1,282,954 | - | -2.0 | |||
1,282,954 | - | +1.0 | |||
1,283,081 | + | narH | b1225 | 0.17 | +1.0 |
1,283,279 | + | narH | b1225 | 0.29 | +2.1 |
1,283,638 | + | narH | b1225 | 0.53 | +0.4 |
1,283,650 | - | narH | b1225 | 0.53 | +1.2 |
1,283,650 | - | narH | b1225 | 0.53 | +0.1 |
Or see this region's nucleotide sequence