Strain Fitness in Escherichia coli BW25113 around b1221
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
1,273,463 | + | ychO | b1220 | 0.33 | +1.6 |
1,273,493 | + | ychO | b1220 | 0.35 | -1.7 |
1,273,732 | + | ychO | b1220 | 0.52 | +1.9 |
1,273,737 | + | ychO | b1220 | 0.52 | +0.1 |
1,273,930 | - | ychO | b1220 | 0.66 | +1.9 |
1,274,003 | + | ychO | b1220 | 0.71 | -0.2 |
1,274,343 | - | -4.1 | |||
1,274,391 | + | +0.9 | |||
1,274,489 | - | narL | b1221 | 0.13 | +3.0 |
1,274,543 | + | narL | b1221 | 0.22 | +1.3 |
1,274,543 | + | narL | b1221 | 0.22 | +1.4 |
1,274,583 | - | narL | b1221 | 0.28 | +1.6 |
1,274,668 | - | narL | b1221 | 0.41 | -2.6 |
1,274,677 | - | narL | b1221 | 0.42 | -4.5 |
1,274,677 | - | narL | b1221 | 0.42 | -3.4 |
1,275,022 | + | +0.6 | |||
1,275,022 | + | +0.3 | |||
1,275,035 | - | +2.8 | |||
1,275,035 | - | +1.3 | |||
1,275,476 | + | narX | b1222 | 0.24 | -1.3 |
1,275,525 | + | narX | b1222 | 0.27 | +3.3 |
1,275,525 | + | narX | b1222 | 0.27 | +1.6 |
1,275,784 | - | narX | b1222 | 0.41 | -3.5 |
1,275,905 | - | narX | b1222 | 0.48 | -1.5 |
1,275,905 | - | narX | b1222 | 0.48 | +0.4 |
Or see this region's nucleotide sequence