Strain Fitness in Escherichia coli BW25113 around b0992
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
1,050,516 | + | +0.3 | |||
1,050,565 | - | +1.5 | |||
1,050,590 | + | +0.6 | |||
1,050,613 | + | +1.2 | |||
1,050,613 | + | +0.9 | |||
1,050,733 | + | cspG | b0990 | 0.23 | +1.3 |
1,050,756 | - | cspG | b0990 | 0.34 | +2.3 |
1,050,756 | - | cspG | b0990 | 0.34 | -0.0 |
1,050,883 | + | +0.0 | |||
1,050,944 | + | -2.4 | |||
1,050,944 | + | -2.6 | |||
1,050,949 | + | +0.3 | |||
1,050,949 | + | +1.9 | |||
1,050,949 | + | -1.3 | |||
1,050,955 | - | -1.1 | |||
1,050,957 | - | -1.2 | |||
1,050,970 | - | +1.2 | |||
1,051,100 | - | ymcE | b0991 | 0.13 | +3.1 |
1,051,100 | - | ymcE | b0991 | 0.13 | -0.8 |
1,051,107 | + | ymcE | b0991 | 0.16 | +0.5 |
1,051,107 | + | ymcE | b0991 | 0.16 | -1.6 |
1,051,149 | + | ymcE | b0991 | 0.34 | +1.2 |
1,051,149 | + | ymcE | b0991 | 0.34 | -0.1 |
1,051,151 | + | ymcE | b0991 | 0.35 | +1.5 |
1,051,161 | - | ymcE | b0991 | 0.39 | -2.4 |
1,051,161 | - | ymcE | b0991 | 0.39 | -2.6 |
1,051,203 | + | ymcE | b0991 | 0.58 | -0.0 |
1,051,203 | + | ymcE | b0991 | 0.58 | +0.5 |
1,051,228 | + | ymcE | b0991 | 0.68 | +1.2 |
1,051,255 | - | ymcE | b0991 | 0.80 | -2.7 |
1,051,480 | - | +0.8 | |||
1,051,591 | - | -3.3 | |||
1,051,631 | - | yccM | b0992 | 0.11 | -0.7 |
1,051,640 | + | yccM | b0992 | 0.12 | +1.6 |
1,051,714 | - | yccM | b0992 | 0.19 | +2.4 |
1,051,717 | + | yccM | b0992 | 0.19 | +1.2 |
1,051,735 | - | yccM | b0992 | 0.21 | -0.2 |
1,051,770 | - | yccM | b0992 | 0.24 | -0.4 |
1,051,872 | - | yccM | b0992 | 0.34 | -1.2 |
1,051,923 | + | yccM | b0992 | 0.38 | -1.9 |
1,051,923 | + | yccM | b0992 | 0.38 | +1.2 |
1,051,940 | - | yccM | b0992 | 0.40 | -0.3 |
1,051,968 | + | yccM | b0992 | 0.42 | -0.0 |
1,052,009 | + | yccM | b0992 | 0.46 | -0.7 |
1,052,029 | + | yccM | b0992 | 0.48 | -1.4 |
1,052,073 | + | yccM | b0992 | 0.52 | -2.4 |
1,052,124 | - | yccM | b0992 | 0.57 | -0.1 |
1,052,175 | + | yccM | b0992 | 0.62 | +1.6 |
1,052,310 | - | yccM | b0992 | 0.74 | -0.7 |
1,052,312 | - | yccM | b0992 | 0.74 | -0.6 |
1,052,406 | - | yccM | b0992 | 0.83 | -1.7 |
1,052,549 | + | -0.1 | |||
1,052,634 | + | +1.1 | |||
1,052,693 | + | -0.7 | |||
1,052,693 | + | +1.5 | |||
1,052,709 | - | -2.8 | |||
1,052,709 | - | +0.0 | |||
1,052,945 | - | torS | b0993 | 0.10 | -1.7 |
1,053,012 | - | torS | b0993 | 0.13 | +1.5 |
1,053,241 | - | torS | b0993 | 0.21 | -1.9 |
1,053,241 | - | torS | b0993 | 0.21 | -2.2 |
1,053,241 | - | torS | b0993 | 0.21 | +0.9 |
1,053,245 | + | torS | b0993 | 0.21 | +0.6 |
1,053,245 | + | torS | b0993 | 0.21 | +0.7 |
1,053,261 | + | torS | b0993 | 0.22 | -2.8 |
1,053,522 | - | torS | b0993 | 0.32 | -2.3 |
1,053,522 | - | torS | b0993 | 0.32 | +1.7 |
Or see this region's nucleotide sequence