Strain Fitness in Escherichia coli BW25113 around b0955
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
1,014,959 | + | rmf | b0953 | 0.12 | +0.6 |
1,014,974 | + | rmf | b0953 | 0.21 | -0.1 |
1,014,974 | + | rmf | b0953 | 0.21 | -1.8 |
1,015,089 | + | +1.1 | |||
1,015,097 | - | +0.1 | |||
1,015,736 | - | +2.2 | |||
1,015,736 | - | +1.7 | |||
1,015,736 | - | +0.3 | |||
1,015,740 | - | -0.5 | |||
1,015,740 | - | -0.1 | |||
1,015,876 | + | +2.1 | |||
1,015,878 | - | +0.3 | |||
1,015,894 | - | -0.7 | |||
1,015,922 | - | +0.8 | |||
1,015,935 | + | -1.1 | |||
1,015,967 | - | ycbZ | b0955 | 0.12 | -1.5 |
1,015,967 | - | ycbZ | b0955 | 0.12 | +3.3 |
1,015,989 | + | ycbZ | b0955 | 0.13 | -0.1 |
1,016,003 | + | ycbZ | b0955 | 0.14 | -2.6 |
1,016,003 | + | ycbZ | b0955 | 0.14 | +0.4 |
1,016,012 | + | ycbZ | b0955 | 0.14 | +1.3 |
1,016,191 | + | ycbZ | b0955 | 0.24 | +0.8 |
1,016,228 | + | ycbZ | b0955 | 0.26 | +3.0 |
1,016,236 | + | ycbZ | b0955 | 0.27 | +3.1 |
1,016,667 | + | ycbZ | b0955 | 0.51 | -1.7 |
1,016,667 | + | ycbZ | b0955 | 0.51 | -0.3 |
1,016,712 | + | ycbZ | b0955 | 0.54 | +2.3 |
1,016,712 | + | ycbZ | b0955 | 0.54 | +0.7 |
1,016,712 | + | ycbZ | b0955 | 0.54 | -0.8 |
1,016,720 | - | ycbZ | b0955 | 0.54 | -0.3 |
1,016,797 | - | ycbZ | b0955 | 0.59 | +3.4 |
1,016,800 | - | ycbZ | b0955 | 0.59 | +1.2 |
1,016,977 | - | ycbZ | b0955 | 0.69 | +1.5 |
1,017,122 | - | ycbZ | b0955 | 0.77 | +1.4 |
1,017,122 | - | ycbZ | b0955 | 0.77 | +1.7 |
1,017,201 | + | ycbZ | b0955 | 0.82 | -1.4 |
1,017,201 | + | ycbZ | b0955 | 0.82 | -2.2 |
1,017,218 | - | ycbZ | b0955 | 0.83 | +2.2 |
1,017,218 | - | ycbZ | b0955 | 0.83 | +0.9 |
1,017,303 | + | ycbZ | b0955 | 0.88 | +2.5 |
1,017,321 | - | ycbZ | b0955 | 0.89 | +1.7 |
1,017,335 | - | ycbZ | b0955 | 0.89 | +2.3 |
1,017,425 | - | -2.9 | |||
1,017,472 | + | -0.3 | |||
1,017,607 | - | -1.2 | |||
1,017,607 | - | +1.7 | |||
1,018,221 | - | -2.7 | |||
1,018,253 | - | -2.4 | |||
1,018,253 | - | -2.5 | |||
1,018,317 | - | -2.2 | |||
1,018,327 | - | -0.9 | |||
1,018,327 | - | -2.1 | |||
1,018,327 | - | -1.1 | |||
1,018,355 | - | ompA | b0957 | 0.11 | -1.7 |
1,018,355 | - | ompA | b0957 | 0.11 | -1.6 |
1,018,483 | - | +0.2 |
Or see this region's nucleotide sequence