Strain Fitness in Escherichia coli BW25113 around b0873
Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | octanol 0.08 vol% |
---|---|---|---|---|---|
remove | |||||
910,452 | - | -2.4 | |||
910,452 | - | +1.5 | |||
910,738 | + | hcr | b0872 | 0.34 | +1.1 |
910,816 | - | hcr | b0872 | 0.42 | -0.5 |
910,826 | - | +2.6 | |||
911,125 | - | hcr | b0872 | 0.74 | +0.0 |
911,167 | - | hcr | b0872 | 0.79 | -0.1 |
911,394 | + | +1.1 | |||
911,394 | + | +2.6 | |||
911,476 | - | +1.9 | |||
911,566 | + | ybjW | b0873 | 0.11 | +0.2 |
911,776 | - | ybjW | b0873 | 0.24 | +0.4 |
911,833 | + | ybjW | b0873 | 0.27 | -3.8 |
911,862 | + | ybjW | b0873 | 0.29 | +0.4 |
911,956 | + | ybjW | b0873 | 0.35 | +1.9 |
911,956 | + | ybjW | b0873 | 0.35 | -0.1 |
912,055 | - | ybjW | b0873 | 0.41 | -2.7 |
912,104 | + | ybjW | b0873 | 0.43 | +2.1 |
912,278 | - | ybjW | b0873 | 0.54 | -1.5 |
912,349 | - | ybjW | b0873 | 0.58 | +0.5 |
912,360 | + | ybjW | b0873 | 0.59 | +0.9 |
912,406 | - | ybjW | b0873 | 0.62 | -0.3 |
912,463 | + | ybjW | b0873 | 0.65 | -1.5 |
912,465 | - | ybjW | b0873 | 0.65 | +1.3 |
912,558 | + | ybjW | b0873 | 0.71 | -0.0 |
912,630 | + | ybjW | b0873 | 0.75 | +0.8 |
912,717 | + | ybjW | b0873 | 0.81 | -1.2 |
912,721 | - | ybjW | b0873 | 0.81 | -0.1 |
912,804 | + | ybjW | b0873 | 0.86 | +0.8 |
912,813 | + | ybjW | b0873 | 0.86 | -0.6 |
912,813 | + | ybjW | b0873 | 0.86 | +1.1 |
912,813 | + | ybjW | b0873 | 0.86 | +0.7 |
912,861 | + | ybjW | b0873 | 0.89 | -0.1 |
912,869 | - | ybjW | b0873 | 0.90 | +1.5 |
912,869 | - | ybjW | b0873 | 0.90 | -3.1 |
912,968 | + | -2.3 | |||
913,267 | + | -1.5 | |||
913,291 | + | ybjE | b0874 | 0.12 | -2.3 |
913,291 | + | ybjE | b0874 | 0.12 | +1.4 |
913,317 | + | ybjE | b0874 | 0.15 | -2.3 |
913,317 | + | ybjE | b0874 | 0.15 | -1.5 |
913,335 | - | ybjE | b0874 | 0.17 | -0.6 |
913,362 | - | ybjE | b0874 | 0.20 | +1.3 |
913,362 | - | ybjE | b0874 | 0.20 | +0.1 |
913,426 | + | ybjE | b0874 | 0.27 | -1.1 |
913,505 | - | ybjE | b0874 | 0.36 | -0.4 |
913,568 | + | ybjE | b0874 | 0.43 | +2.2 |
913,568 | + | ybjE | b0874 | 0.43 | -1.6 |
913,577 | - | ybjE | b0874 | 0.44 | -0.4 |
913,577 | - | ybjE | b0874 | 0.44 | +0.1 |
913,597 | - | ybjE | b0874 | 0.46 | -0.2 |
913,597 | - | ybjE | b0874 | 0.46 | -0.7 |
913,611 | - | ybjE | b0874 | 0.48 | -2.5 |
913,611 | - | ybjE | b0874 | 0.48 | +1.0 |
913,708 | + | ybjE | b0874 | 0.59 | -0.4 |
913,729 | - | ybjE | b0874 | 0.61 | -0.3 |
913,733 | + | ybjE | b0874 | 0.61 | +1.7 |
913,733 | + | ybjE | b0874 | 0.61 | -1.1 |
913,750 | + | ybjE | b0874 | 0.63 | +2.3 |
913,812 | + | ybjE | b0874 | 0.70 | +0.1 |
913,824 | + | ybjE | b0874 | 0.71 | -2.2 |
913,824 | + | ybjE | b0874 | 0.71 | -1.2 |
913,830 | - | ybjE | b0874 | 0.72 | +2.3 |
913,897 | - | ybjE | b0874 | 0.80 | +3.3 |
913,914 | + | ybjE | b0874 | 0.81 | +1.8 |
913,922 | + | ybjE | b0874 | 0.82 | -3.4 |
913,924 | - | ybjE | b0874 | 0.83 | +1.7 |
913,934 | + | ybjE | b0874 | 0.84 | +0.4 |
913,934 | + | ybjE | b0874 | 0.84 | +2.0 |
913,939 | + | ybjE | b0874 | 0.84 | +1.8 |
914,030 | + | +1.1 | |||
914,035 | + | +1.3 |
Or see this region's nucleotide sequence