Experiment: octanol 0.08 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fhuC and fhuD overlap by 1 nucleotides fhuD and fhuB overlap by 4 nucleotides fhuB and hemL are separated by 157 nucleotides
b0151: fhuC - iron-hydroxamate transporter subunit (NCBI), at 169,778 to 170,575
fhuC
b0152: fhuD - iron-hydroxamate transporter subunit (NCBI), at 170,575 to 171,465
fhuD
b0153: fhuB - fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components (NCBI), at 171,462 to 173,444
fhuB
b0154: hemL - glutamate-1-semialdehyde aminotransferase (NCBI), at 173,602 to 174,882
hemL
Position (kb) 171
172
173
174 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 170.654 kb on - strand at 170.671 kb on + strand, within fhuD at 170.671 kb on + strand, within fhuD at 170.689 kb on - strand, within fhuD at 170.739 kb on + strand, within fhuD at 170.739 kb on + strand, within fhuD at 170.755 kb on - strand, within fhuD at 170.755 kb on - strand, within fhuD at 170.775 kb on + strand, within fhuD at 170.831 kb on + strand, within fhuD at 170.869 kb on + strand, within fhuD at 170.869 kb on + strand, within fhuD at 170.895 kb on - strand, within fhuD at 170.895 kb on - strand, within fhuD at 170.972 kb on - strand, within fhuD at 171.065 kb on + strand, within fhuD at 171.199 kb on + strand, within fhuD at 171.199 kb on + strand, within fhuD at 171.219 kb on + strand, within fhuD at 171.225 kb on + strand, within fhuD at 171.225 kb on + strand, within fhuD at 171.228 kb on + strand, within fhuD at 171.228 kb on + strand, within fhuD at 171.238 kb on - strand, within fhuD at 171.238 kb on - strand, within fhuD at 171.307 kb on - strand, within fhuD at 171.336 kb on + strand, within fhuD at 171.336 kb on + strand, within fhuD at 171.423 kb on + strand at 171.423 kb on - strand at 171.423 kb on - strand at 171.506 kb on + strand at 171.514 kb on - strand at 171.533 kb on - strand at 171.678 kb on + strand, within fhuB at 171.678 kb on + strand, within fhuB at 171.680 kb on + strand, within fhuB at 171.680 kb on + strand, within fhuB at 171.680 kb on - strand, within fhuB at 171.680 kb on - strand, within fhuB at 171.695 kb on + strand, within fhuB at 171.742 kb on + strand, within fhuB at 171.794 kb on + strand, within fhuB at 171.867 kb on + strand, within fhuB at 171.910 kb on + strand, within fhuB at 171.910 kb on + strand, within fhuB at 172.063 kb on + strand, within fhuB at 172.088 kb on - strand, within fhuB at 172.202 kb on + strand, within fhuB at 172.218 kb on - strand, within fhuB at 172.222 kb on - strand, within fhuB at 172.261 kb on + strand, within fhuB at 172.281 kb on + strand, within fhuB at 172.281 kb on + strand, within fhuB at 172.289 kb on + strand, within fhuB at 172.290 kb on - strand, within fhuB at 172.293 kb on + strand, within fhuB at 172.293 kb on + strand, within fhuB at 172.314 kb on + strand, within fhuB at 172.369 kb on - strand, within fhuB at 172.543 kb on - strand, within fhuB at 172.543 kb on - strand, within fhuB at 172.548 kb on + strand, within fhuB at 172.569 kb on - strand, within fhuB at 172.581 kb on + strand, within fhuB at 172.687 kb on + strand, within fhuB at 172.695 kb on - strand, within fhuB at 172.723 kb on + strand, within fhuB at 172.731 kb on - strand, within fhuB at 172.734 kb on + strand, within fhuB at 172.755 kb on + strand, within fhuB at 172.767 kb on + strand, within fhuB at 172.767 kb on + strand, within fhuB at 172.823 kb on - strand, within fhuB at 172.823 kb on - strand, within fhuB at 172.922 kb on - strand, within fhuB at 172.930 kb on + strand, within fhuB at 172.946 kb on - strand, within fhuB at 172.946 kb on - strand, within fhuB at 173.030 kb on + strand, within fhuB at 173.122 kb on - strand, within fhuB at 173.122 kb on - strand, within fhuB at 173.126 kb on - strand, within fhuB at 173.209 kb on + strand, within fhuB at 173.232 kb on - strand, within fhuB at 173.241 kb on + strand, within fhuB at 173.280 kb on + strand at 173.280 kb on + strand at 173.288 kb on - strand at 173.288 kb on - strand at 173.329 kb on + strand at 173.378 kb on - strand at 173.392 kb on + strand at 173.401 kb on - strand at 173.401 kb on - strand at 173.463 kb on + strand at 173.463 kb on - strand at 173.468 kb on + strand at 173.478 kb on + strand at 173.600 kb on + strand at 173.600 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanol 0.08 vol% remove 170,654 - +1.7 170,671 + fhuD b0152 0.11 +1.4 170,671 + fhuD b0152 0.11 -3.3 170,689 - fhuD b0152 0.13 -0.2 170,739 + fhuD b0152 0.18 +0.3 170,739 + fhuD b0152 0.18 +0.7 170,755 - fhuD b0152 0.20 -1.3 170,755 - fhuD b0152 0.20 -1.6 170,775 + fhuD b0152 0.22 +1.5 170,831 + fhuD b0152 0.29 +0.4 170,869 + fhuD b0152 0.33 -0.3 170,869 + fhuD b0152 0.33 -3.0 170,895 - fhuD b0152 0.36 -1.8 170,895 - fhuD b0152 0.36 +2.9 170,972 - fhuD b0152 0.45 -0.7 171,065 + fhuD b0152 0.55 +1.1 171,199 + fhuD b0152 0.70 -0.7 171,199 + fhuD b0152 0.70 -2.7 171,219 + fhuD b0152 0.72 +0.4 171,225 + fhuD b0152 0.73 +0.1 171,225 + fhuD b0152 0.73 +1.1 171,228 + fhuD b0152 0.73 +1.7 171,228 + fhuD b0152 0.73 -1.8 171,238 - fhuD b0152 0.74 +2.1 171,238 - fhuD b0152 0.74 -3.6 171,307 - fhuD b0152 0.82 +2.7 171,336 + fhuD b0152 0.85 -2.0 171,336 + fhuD b0152 0.85 +2.4 171,423 + -0.5 171,423 - +2.0 171,423 - +0.4 171,506 + +0.3 171,514 - +0.1 171,533 - +2.5 171,678 + fhuB b0153 0.11 +1.1 171,678 + fhuB b0153 0.11 -2.4 171,680 + fhuB b0153 0.11 -2.0 171,680 + fhuB b0153 0.11 -1.3 171,680 - fhuB b0153 0.11 +0.5 171,680 - fhuB b0153 0.11 -1.5 171,695 + fhuB b0153 0.12 +0.6 171,742 + fhuB b0153 0.14 -0.0 171,794 + fhuB b0153 0.17 +1.2 171,867 + fhuB b0153 0.20 -2.0 171,910 + fhuB b0153 0.23 -1.2 171,910 + fhuB b0153 0.23 +0.6 172,063 + fhuB b0153 0.30 -2.0 172,088 - fhuB b0153 0.32 -2.9 172,202 + fhuB b0153 0.37 -3.0 172,218 - fhuB b0153 0.38 -2.0 172,222 - fhuB b0153 0.38 +1.2 172,261 + fhuB b0153 0.40 -1.4 172,281 + fhuB b0153 0.41 +1.1 172,281 + fhuB b0153 0.41 +2.3 172,289 + fhuB b0153 0.42 -1.3 172,290 - fhuB b0153 0.42 -1.9 172,293 + fhuB b0153 0.42 -1.2 172,293 + fhuB b0153 0.42 -2.4 172,314 + fhuB b0153 0.43 -3.1 172,369 - fhuB b0153 0.46 -1.9 172,543 - fhuB b0153 0.55 -2.7 172,543 - fhuB b0153 0.55 +0.3 172,548 + fhuB b0153 0.55 -0.1 172,569 - fhuB b0153 0.56 -3.1 172,581 + fhuB b0153 0.56 -2.1 172,687 + fhuB b0153 0.62 -1.5 172,695 - fhuB b0153 0.62 -2.8 172,723 + fhuB b0153 0.64 +1.2 172,731 - fhuB b0153 0.64 +0.6 172,734 + fhuB b0153 0.64 -0.9 172,755 + fhuB b0153 0.65 +0.3 172,767 + fhuB b0153 0.66 -0.7 172,767 + fhuB b0153 0.66 -1.1 172,823 - fhuB b0153 0.69 -2.8 172,823 - fhuB b0153 0.69 -3.1 172,922 - fhuB b0153 0.74 -1.6 172,930 + fhuB b0153 0.74 +3.4 172,946 - fhuB b0153 0.75 -1.3 172,946 - fhuB b0153 0.75 +0.4 173,030 + fhuB b0153 0.79 +0.6 173,122 - fhuB b0153 0.84 +0.1 173,122 - fhuB b0153 0.84 -2.8 173,126 - fhuB b0153 0.84 -3.4 173,209 + fhuB b0153 0.88 -0.4 173,232 - fhuB b0153 0.89 -0.6 173,241 + fhuB b0153 0.90 -2.4 173,280 + +1.0 173,280 + +1.7 173,288 - -2.0 173,288 - +1.1 173,329 + +1.4 173,378 - +0.3 173,392 + -2.5 173,401 - +2.0 173,401 - -0.9 173,463 + +0.9 173,463 - -2.5 173,468 + +0.6 173,478 + -3.0 173,600 + +0.9 173,600 - +1.5
Or see this region's nucleotide sequence