Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29900

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
6,650,871	-		PFLU_RS29895	0.81	-0.9
6,650,913	+		PFLU_RS29895	0.82	+0.5
6,650,913	+		PFLU_RS29895	0.82	-0.4
6,650,913	+		PFLU_RS29895	0.82	-1.8
6,650,913	+		PFLU_RS29895	0.82	-0.6
6,650,914	-		PFLU_RS29895	0.82	-1.1
6,650,914	-		PFLU_RS29895	0.82	-0.3
6,650,914	-		PFLU_RS29895	0.82	-0.5
6,650,914	-		PFLU_RS29895	0.82	-0.3
6,650,914	-		PFLU_RS29895	0.82	+0.3
6,650,914	-		PFLU_RS29895	0.82	-0.4
6,650,914	-		PFLU_RS29895	0.82	+0.2
6,650,914	-		PFLU_RS29895	0.82	-0.0
6,650,976	+		PFLU_RS29895	0.85	+0.5
6,651,037	+		PFLU_RS29895	0.87	-0.2
6,651,037	+		PFLU_RS29895	0.87	-0.3
6,651,038	-		PFLU_RS29895	0.87	-0.2
6,651,234	+				+1.0
6,651,234	+				-0.4
6,651,234	+				-0.4
6,651,234	+				-0.2
6,651,234	+				-0.5
6,651,235	-				+0.0
6,651,235	-				+0.2
6,651,235	-				-0.2
6,651,316	-				+0.4
6,651,316	-				-0.1
6,651,316	-				+0.2
6,651,316	-				+0.3
6,651,316	-				-1.2
6,651,354	+				+1.0
6,651,354	+				-0.2
6,651,354	+				-0.7
6,651,355	-				+0.5
6,651,418	+				-0.1
6,651,418	+				-0.3
6,651,418	+				+0.2
6,651,418	+				+1.5
6,651,419	-				-0.6
6,651,419	-				+0.3
6,651,419	-				-1.4
6,651,419	-				-0.1
6,651,419	-				+0.7
6,651,419	-				-0.1
6,651,419	-				+0.2
6,651,431	+				+0.5
6,651,431	+				-0.4
6,651,431	+				+0.3
6,651,431	+				-0.3
6,651,431	+				-1.8
6,651,431	+				+0.7
6,651,431	+				-1.0
6,651,431	+				+0.5
6,651,431	+				-1.1
6,651,431	+				+0.5
6,651,431	+				-0.7
6,651,432	-				-0.7
6,651,432	-				-0.6
6,651,432	-				+1.2
6,651,432	-				-0.3
6,651,432	-				+0.1
6,651,432	-				-0.5
6,651,432	-				-0.0
6,651,432	-				-0.1
6,651,432	-				-0.9
6,651,432	-				-0.7
6,651,432	-				-0.5
6,651,432	-				-0.8
6,651,432	-				+0.2
6,651,432	-				-1.4
6,651,432	-				-0.1
6,651,432	-				+0.1
6,651,432	-				+0.0
6,651,432	-				+0.3
6,651,432	-				+0.0
6,651,432	-				-0.1
6,651,433	+				+0.8
6,651,433	+				-0.8
6,651,433	+				-0.4
6,651,433	+				+0.0
6,651,434	-				-0.9
6,651,434	-				-0.5
6,651,434	-				-0.5
6,651,434	-				+0.6
6,651,434	-				-0.3
6,651,434	-				-0.0
6,651,463	+				-0.2
6,651,463	+				+0.1
6,651,463	+				-0.1
6,651,463	+				-1.3
6,651,463	+				-0.1
6,651,463	+				-1.2
6,651,463	+				-0.0
6,651,464	-				-0.5
6,651,464	-				-0.9
6,651,464	-				+0.2
6,651,464	-				-0.6
6,651,464	-				-0.9
6,651,464	-				-0.0
6,651,464	-				-0.7
6,651,464	-				-0.1
6,651,464	-				+0.2
6,651,464	-				-1.1
6,651,464	-				-1.6
6,651,464	-				+0.3
6,651,464	-				-0.2
6,651,464	-				-0.3
6,651,464	-				-1.3
6,651,464	-				-1.3
6,651,464	-				-0.3
6,651,494	+				-0.6
6,651,494	+				+0.8
6,651,494	+				+0.0
6,651,494	+				-0.1
6,651,494	+				+0.2
6,651,495	-				+0.6
6,651,495	-				-1.0
6,651,502	-				-1.9
6,651,502	-				-0.2
6,651,628	+				+0.1
6,651,628	+				+0.5
6,651,628	+				+0.8
6,651,629	-				+0.1
6,651,629	-				-1.6
6,651,629	-				-0.2
6,651,629	-				-0.7
6,651,654	+				-0.1
6,651,654	+				-0.3
6,651,654	+				+0.1
6,651,654	+				+0.4
6,651,654	+				-0.5
6,651,654	+				+0.4
6,651,654	+				-0.4
6,651,654	+				-0.0
6,651,655	-				+0.1
6,651,655	-				-1.0
6,651,655	-				+0.2
6,651,655	-				+0.9
6,651,655	-				-0.2
6,651,655	-				+0.2
6,651,655	-				+0.1
6,652,106	+		PFLU_RS29900	0.20	-0.3
6,652,191	+		PFLU_RS29900	0.24	+1.1
6,652,191	+		PFLU_RS29900	0.24	+0.3
6,652,191	+		PFLU_RS29900	0.24	-1.5
6,652,191	+		PFLU_RS29900	0.24	+1.4
6,652,191	+		PFLU_RS29900	0.24	-1.5
6,652,191	+		PFLU_RS29900	0.24	-0.1
6,652,192	-		PFLU_RS29900	0.24	-1.0
6,652,192	-		PFLU_RS29900	0.24	-0.7
6,652,192	-		PFLU_RS29900	0.24	-1.2
6,652,192	-		PFLU_RS29900	0.24	-0.5
6,652,200	+		PFLU_RS29900	0.24	+0.1
6,652,201	-		PFLU_RS29900	0.24	+1.3
6,652,299	+		PFLU_RS29900	0.29	-0.7
6,652,300	-		PFLU_RS29900	0.29	-0.9
6,652,360	-		PFLU_RS29900	0.32	+0.5
6,652,360	-		PFLU_RS29900	0.32	+0.0
6,652,360	-		PFLU_RS29900	0.32	+0.9
6,652,360	-		PFLU_RS29900	0.32	-2.6
6,652,431	+		PFLU_RS29900	0.35	+0.3
6,652,431	+		PFLU_RS29900	0.35	+0.3
6,652,431	+		PFLU_RS29900	0.35	-1.9
6,652,432	-		PFLU_RS29900	0.35	+0.7
6,652,432	-		PFLU_RS29900	0.35	+0.1
6,652,464	+		PFLU_RS29900	0.37	-0.3
6,652,464	+		PFLU_RS29900	0.37	+0.1
6,652,464	+		PFLU_RS29900	0.37	+0.4
6,652,464	+		PFLU_RS29900	0.37	-0.5
6,652,464	+		PFLU_RS29900	0.37	-0.4
6,652,464	+		PFLU_RS29900	0.37	-1.4
6,652,464	+		PFLU_RS29900	0.37	-1.7
6,652,464	+		PFLU_RS29900	0.37	+0.3
6,652,464	+		PFLU_RS29900	0.37	-0.7
6,652,465	-		PFLU_RS29900	0.37	+1.0
6,652,465	-		PFLU_RS29900	0.37	+1.0
6,652,465	-		PFLU_RS29900	0.37	+1.0
6,652,465	-		PFLU_RS29900	0.37	+0.8
6,652,465	-		PFLU_RS29900	0.37	+0.3
6,652,465	-		PFLU_RS29900	0.37	-0.0
6,652,465	-		PFLU_RS29900	0.37	+0.5
6,652,471	-		PFLU_RS29900	0.37	-0.7
6,652,518	+		PFLU_RS29900	0.39	-0.2
6,652,518	+		PFLU_RS29900	0.39	-0.4
6,652,518	+		PFLU_RS29900	0.39	-2.2
6,652,518	+		PFLU_RS29900	0.39	+0.5
6,652,519	-		PFLU_RS29900	0.39	-0.7
6,652,632	+		PFLU_RS29900	0.44	-0.2
6,652,633	-		PFLU_RS29900	0.44	+0.5
6,652,665	+		PFLU_RS29900	0.46	-0.5
6,652,665	+		PFLU_RS29900	0.46	-0.6
6,652,666	-		PFLU_RS29900	0.46	-0.4
6,652,666	-		PFLU_RS29900	0.46	-0.0
6,652,666	-		PFLU_RS29900	0.46	+0.5
6,652,669	+		PFLU_RS29900	0.46	+0.8
6,652,669	+		PFLU_RS29900	0.46	+1.9
6,652,669	+		PFLU_RS29900	0.46	+0.0
6,652,670	-		PFLU_RS29900	0.46	-0.1
6,652,670	-		PFLU_RS29900	0.46	+0.1
6,652,670	-		PFLU_RS29900	0.46	+0.2
6,652,670	-		PFLU_RS29900	0.46	-0.3
6,652,732	-		PFLU_RS29900	0.49	+0.3
6,652,732	-		PFLU_RS29900	0.49	-0.4
6,652,800	+		PFLU_RS29900	0.52	-0.4
6,652,800	+		PFLU_RS29900	0.52	-0.3
6,652,800	+		PFLU_RS29900	0.52	-0.2
6,652,801	-		PFLU_RS29900	0.52	-1.7
6,652,801	-		PFLU_RS29900	0.52	-0.2
6,652,801	-		PFLU_RS29900	0.52	-0.6
6,652,801	-		PFLU_RS29900	0.52	+0.5
6,652,801	-		PFLU_RS29900	0.52	+0.2
6,652,852	-		PFLU_RS29900	0.54	-1.4
6,652,852	-		PFLU_RS29900	0.54	-1.2
6,652,852	-		PFLU_RS29900	0.54	-0.3
6,652,852	-		PFLU_RS29900	0.54	-0.2
6,653,013	-		PFLU_RS29900	0.62	+0.7
6,653,188	+		PFLU_RS29900	0.70	-0.4
6,653,376	+		PFLU_RS29900	0.78	-0.0
6,653,376	+		PFLU_RS29900	0.78	-0.1
6,653,377	-		PFLU_RS29900	0.78	-0.1
6,653,377	-		PFLU_RS29900	0.78	-0.5
6,653,469	+		PFLU_RS29900	0.83	-0.9
6,653,469	+		PFLU_RS29900	0.83	+1.3
6,653,469	+		PFLU_RS29900	0.83	-0.1
6,653,469	+		PFLU_RS29900	0.83	-1.0
6,653,511	+		PFLU_RS29900	0.84	-0.8
6,653,511	+		PFLU_RS29900	0.84	+0.2
6,653,512	-		PFLU_RS29900	0.85	+1.6
6,653,547	+		PFLU_RS29900	0.86	+0.5
6,653,547	+		PFLU_RS29900	0.86	-0.2
6,653,547	+		PFLU_RS29900	0.86	-0.9
6,653,547	+		PFLU_RS29900	0.86	-0.3
6,653,547	+		PFLU_RS29900	0.86	-0.3
6,653,547	+		PFLU_RS29900	0.86	-0.7
6,653,547	+		PFLU_RS29900	0.86	-1.8
6,653,547	+		PFLU_RS29900	0.86	+0.1
6,653,547	+		PFLU_RS29900	0.86	-0.4
6,653,547	+		PFLU_RS29900	0.86	-0.1
6,653,547	+		PFLU_RS29900	0.86	-0.4
6,653,547	+		PFLU_RS29900	0.86	+1.5
6,653,548	-		PFLU_RS29900	0.86	-0.4
6,653,548	-		PFLU_RS29900	0.86	-1.0
6,653,548	-		PFLU_RS29900	0.86	-0.8
6,653,548	-		PFLU_RS29900	0.86	+0.8
6,653,548	-		PFLU_RS29900	0.86	-0.1
6,653,548	-		PFLU_RS29900	0.86	-0.1
6,653,548	-		PFLU_RS29900	0.86	-0.3
6,653,569	+		PFLU_RS29900	0.87	-0.7
6,653,663	+				-0.3
6,653,663	+				+0.1
6,653,663	+				+0.2
6,653,663	+				+0.6
6,653,663	+				-0.3
6,653,663	+				-0.0
6,653,663	+				+0.4
6,653,663	+				-0.7
6,653,663	+				+0.6
6,653,663	+				+1.1
6,653,663	+				+1.0
6,653,663	+				+0.6
6,653,663	+				+0.6
6,653,664	-				+0.5
6,653,664	-				+0.2
6,653,664	-				-0.1
6,653,664	-				+0.7
6,653,664	-				+0.2
6,653,664	-				-0.1
6,653,664	-				+0.3
6,653,664	-				-0.5
6,653,664	-				-1.1
6,653,664	-				-0.5
6,653,908	+				+0.5
6,653,908	+				-1.5
6,653,909	-				+0.4
6,653,909	-				+0.8
6,653,909	-				-0.7
6,653,909	-				+0.1
6,653,909	-				+0.3
6,653,939	-				+0.6
6,653,956	+				+0.0
6,653,956	+				+0.1
6,653,956	+				+0.9
6,653,957	-				+0.6
6,653,963	-				-0.0
6,653,963	-				+0.3
6,653,963	-				+0.3
6,653,963	-				+0.6
6,653,963	-				+0.4
6,653,963	-				+0.1
6,653,965	+				+0.0
6,653,965	+				-0.1
6,653,965	+				+0.6
6,653,965	+				-0.5
6,653,965	+				-0.6
6,653,965	+				-0.2
6,653,965	+				-0.1
6,653,965	+				+0.7
6,653,965	+				+0.6
6,653,965	+				+0.3
6,653,966	-				+0.7
6,653,966	-				+0.7
6,653,966	-				+0.0
6,653,966	-				+0.2
6,653,973	-				+0.9
6,654,015	+				+0.1
6,654,015	+				-1.2
6,654,015	+				+0.2
6,654,015	+				+0.1
6,654,016	-				-1.7
6,654,016	-				+0.2
6,654,036	+				+1.0
6,654,036	+				-0.3
6,654,036	+				-0.3
6,654,036	+				-0.8
6,654,037	-				+0.1
6,654,101	+				-2.1
6,654,472	+		PFLU_RS29905	0.44	-0.1
6,654,472	+		PFLU_RS29905	0.44	+0.2
6,654,472	+		PFLU_RS29905	0.44	-0.7
6,654,472	+		PFLU_RS29905	0.44	-0.1
6,654,472	+		PFLU_RS29905	0.44	+0.1
6,654,472	+		PFLU_RS29905	0.44	+0.2
6,654,472	+		PFLU_RS29905	0.44	-1.0
6,654,472	+		PFLU_RS29905	0.44	+0.9
6,654,472	+		PFLU_RS29905	0.44	-0.4
6,654,473	-		PFLU_RS29905	0.44	+0.7
6,654,473	-		PFLU_RS29905	0.44	+1.2
6,654,473	-		PFLU_RS29905	0.44	+1.2
6,654,473	-		PFLU_RS29905	0.44	+0.1
6,654,473	-		PFLU_RS29905	0.44	+0.2
6,654,473	-		PFLU_RS29905	0.44	+0.6
6,654,473	-		PFLU_RS29905	0.44	+0.2
6,654,473	-		PFLU_RS29905	0.44	-0.4
6,654,759	+		PFLU_RS29905	0.77	+0.2
6,654,759	+		PFLU_RS29905	0.77	-0.4
6,654,759	+		PFLU_RS29905	0.77	-0.2
6,654,760	-		PFLU_RS29905	0.77	-0.4
6,654,760	-		PFLU_RS29905	0.77	+0.6
6,654,760	-		PFLU_RS29905	0.77	-1.7
6,654,760	-		PFLU_RS29905	0.77	+0.1
6,654,778	+		PFLU_RS29905	0.79	-1.2
6,654,841	+		PFLU_RS29905	0.87	+0.5