Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS23905 and PFLU_RS23910 are separated by 0 nucleotides PFLU_RS23910 and PFLU_RS23915 are separated by 13 nucleotides PFLU_RS23915 and PFLU_RS23920 are separated by 87 nucleotides PFLU_RS23920 and PFLU_RS23925 are separated by 1 nucleotides
PFLU_RS23905: PFLU_RS23905 - segregation/condensation protein A, at 5,356,956 to 5,357,774
_RS23905
PFLU_RS23910: PFLU_RS23910 - threonylcarbamoyl-AMP synthase, at 5,357,775 to 5,358,404
_RS23910
PFLU_RS23915: PFLU_RS23915 - PHP domain-containing protein, at 5,358,418 to 5,359,281
_RS23915
PFLU_RS23920: PFLU_RS23920 - septation protein A, at 5,359,369 to 5,359,965
_RS23920
PFLU_RS23925: PFLU_RS23925 - YciI family protein, at 5,359,967 to 5,360,266
_RS23925
Position (kb) 5358
5359
5360 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5357.488 kb on + strand, within PFLU_RS23905 at 5357.488 kb on + strand, within PFLU_RS23905 at 5357.488 kb on + strand, within PFLU_RS23905 at 5357.488 kb on + strand, within PFLU_RS23905 at 5357.489 kb on - strand, within PFLU_RS23905 at 5357.489 kb on - strand, within PFLU_RS23905 at 5357.489 kb on - strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.542 kb on + strand, within PFLU_RS23905 at 5357.542 kb on + strand, within PFLU_RS23905 at 5357.542 kb on + strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.606 kb on - strand, within PFLU_RS23905 at 5357.606 kb on - strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.672 kb on - strand, within PFLU_RS23905 at 5357.672 kb on - strand, within PFLU_RS23905 at 5357.672 kb on - strand, within PFLU_RS23905 at 5357.672 kb on - strand, within PFLU_RS23905 at 5357.707 kb on + strand at 5357.707 kb on + strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5358.108 kb on - strand, within PFLU_RS23910 at 5358.108 kb on - strand, within PFLU_RS23910 at 5358.116 kb on - strand, within PFLU_RS23910 at 5358.116 kb on - strand, within PFLU_RS23910 at 5358.246 kb on + strand, within PFLU_RS23910 at 5358.246 kb on + strand, within PFLU_RS23910 at 5358.246 kb on + strand, within PFLU_RS23910 at 5358.247 kb on - strand, within PFLU_RS23910 at 5358.311 kb on - strand, within PFLU_RS23910 at 5358.311 kb on - strand, within PFLU_RS23910 at 5358.353 kb on + strand at 5358.354 kb on - strand at 5358.411 kb on + strand at 5358.412 kb on - strand at 5358.432 kb on + strand at 5358.645 kb on + strand, within PFLU_RS23915 at 5358.645 kb on + strand, within PFLU_RS23915 at 5358.645 kb on + strand, within PFLU_RS23915 at 5358.645 kb on + strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.689 kb on + strand, within PFLU_RS23915 at 5358.690 kb on - strand, within PFLU_RS23915 at 5358.690 kb on - strand, within PFLU_RS23915 at 5358.967 kb on + strand, within PFLU_RS23915 at 5358.968 kb on - strand, within PFLU_RS23915 at 5358.968 kb on - strand, within PFLU_RS23915 at 5359.291 kb on + strand at 5359.291 kb on + strand at 5359.291 kb on + strand at 5359.292 kb on - strand at 5359.292 kb on - strand at 5359.292 kb on - strand at 5359.292 kb on - strand at 5359.292 kb on - strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.322 kb on + strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.323 kb on - strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.334 kb on + strand at 5359.335 kb on - strand at 5359.335 kb on - strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.337 kb on + strand at 5359.338 kb on - strand at 5359.338 kb on - strand at 5359.338 kb on - strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.365 kb on + strand at 5359.366 kb on - strand at 5359.366 kb on - strand at 5359.478 kb on - strand, within PFLU_RS23920 at 5359.498 kb on - strand, within PFLU_RS23920 at 5359.498 kb on - strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.905 kb on + strand, within PFLU_RS23920 at 5359.906 kb on - strand at 5359.906 kb on - strand at 5359.909 kb on + strand at 5359.909 kb on + strand at 5359.909 kb on + strand at 5359.909 kb on + strand at 5359.910 kb on - strand at 5359.910 kb on - strand at 5359.910 kb on - strand at 5359.910 kb on - strand at 5359.974 kb on - strand at 5359.974 kb on - strand at 5359.974 kb on - strand at 5359.974 kb on - strand at 5359.974 kb on - strand at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.074 kb on + strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.075 kb on - strand, within PFLU_RS23925 at 5360.204 kb on + strand, within PFLU_RS23925 at 5360.204 kb on + strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925 at 5360.205 kb on - strand, within PFLU_RS23925
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 5,357,488 + PFLU_RS23905 0.65 +0.6 5,357,488 + PFLU_RS23905 0.65 +0.3 5,357,488 + PFLU_RS23905 0.65 -0.4 5,357,488 + PFLU_RS23905 0.65 -0.6 5,357,489 - PFLU_RS23905 0.65 -0.6 5,357,489 - PFLU_RS23905 0.65 +0.7 5,357,489 - PFLU_RS23905 0.65 +0.8 5,357,533 + PFLU_RS23905 0.70 +0.6 5,357,533 + PFLU_RS23905 0.70 +0.1 5,357,533 + PFLU_RS23905 0.70 +1.1 5,357,533 + PFLU_RS23905 0.70 +0.5 5,357,533 + PFLU_RS23905 0.70 -0.4 5,357,533 + PFLU_RS23905 0.70 +0.2 5,357,533 + PFLU_RS23905 0.70 -1.4 5,357,533 + PFLU_RS23905 0.70 -0.4 5,357,533 + PFLU_RS23905 0.70 +0.8 5,357,533 + PFLU_RS23905 0.70 +0.2 5,357,534 - PFLU_RS23905 0.71 -0.2 5,357,534 - PFLU_RS23905 0.71 -1.0 5,357,534 - PFLU_RS23905 0.71 +1.2 5,357,534 - PFLU_RS23905 0.71 -0.4 5,357,534 - PFLU_RS23905 0.71 -0.3 5,357,534 - PFLU_RS23905 0.71 +0.2 5,357,542 + PFLU_RS23905 0.72 -1.0 5,357,542 + PFLU_RS23905 0.72 +0.4 5,357,542 + PFLU_RS23905 0.72 +0.5 5,357,543 - PFLU_RS23905 0.72 -2.3 5,357,543 - PFLU_RS23905 0.72 +0.1 5,357,543 - PFLU_RS23905 0.72 -0.9 5,357,543 - PFLU_RS23905 0.72 -0.7 5,357,543 - PFLU_RS23905 0.72 +1.3 5,357,543 - PFLU_RS23905 0.72 -0.6 5,357,605 + PFLU_RS23905 0.79 +0.1 5,357,605 + PFLU_RS23905 0.79 -0.2 5,357,605 + PFLU_RS23905 0.79 -0.1 5,357,605 + PFLU_RS23905 0.79 +0.4 5,357,605 + PFLU_RS23905 0.79 -1.3 5,357,606 - PFLU_RS23905 0.79 -0.2 5,357,606 - PFLU_RS23905 0.79 -0.1 5,357,671 + PFLU_RS23905 0.87 -1.6 5,357,671 + PFLU_RS23905 0.87 -0.3 5,357,671 + PFLU_RS23905 0.87 -1.1 5,357,671 + PFLU_RS23905 0.87 -0.9 5,357,671 + PFLU_RS23905 0.87 +0.4 5,357,671 + PFLU_RS23905 0.87 -0.1 5,357,671 + PFLU_RS23905 0.87 -0.0 5,357,671 + PFLU_RS23905 0.87 +0.6 5,357,671 + PFLU_RS23905 0.87 +0.4 5,357,672 - PFLU_RS23905 0.87 -0.5 5,357,672 - PFLU_RS23905 0.87 -0.7 5,357,672 - PFLU_RS23905 0.87 +0.5 5,357,672 - PFLU_RS23905 0.87 -0.7 5,357,707 + -0.6 5,357,707 + -0.4 5,357,708 - -0.5 5,357,708 - +0.0 5,357,708 - +1.2 5,357,708 - +0.1 5,357,708 - -0.3 5,357,708 - +0.2 5,357,708 - +0.5 5,357,708 - +0.1 5,358,108 - PFLU_RS23910 0.53 +0.2 5,358,108 - PFLU_RS23910 0.53 -0.2 5,358,116 - PFLU_RS23910 0.54 +1.1 5,358,116 - PFLU_RS23910 0.54 -0.2 5,358,246 + PFLU_RS23910 0.75 -0.2 5,358,246 + PFLU_RS23910 0.75 -0.3 5,358,246 + PFLU_RS23910 0.75 +0.2 5,358,247 - PFLU_RS23910 0.75 -2.3 5,358,311 - PFLU_RS23910 0.85 -0.0 5,358,311 - PFLU_RS23910 0.85 +0.6 5,358,353 + -1.6 5,358,354 - +1.5 5,358,411 + +0.8 5,358,412 - -0.0 5,358,432 + -0.5 5,358,645 + PFLU_RS23915 0.26 +0.4 5,358,645 + PFLU_RS23915 0.26 +0.2 5,358,645 + PFLU_RS23915 0.26 -0.8 5,358,645 + PFLU_RS23915 0.26 -0.6 5,358,646 - PFLU_RS23915 0.26 -0.1 5,358,646 - PFLU_RS23915 0.26 +2.3 5,358,646 - PFLU_RS23915 0.26 -0.1 5,358,646 - PFLU_RS23915 0.26 -0.8 5,358,646 - PFLU_RS23915 0.26 +0.3 5,358,647 + PFLU_RS23915 0.27 -1.0 5,358,647 + PFLU_RS23915 0.27 +0.4 5,358,647 + PFLU_RS23915 0.27 +0.7 5,358,647 + PFLU_RS23915 0.27 -1.5 5,358,647 + PFLU_RS23915 0.27 +0.6 5,358,648 - PFLU_RS23915 0.27 +0.1 5,358,648 - PFLU_RS23915 0.27 -1.4 5,358,648 - PFLU_RS23915 0.27 -0.5 5,358,648 - PFLU_RS23915 0.27 -0.0 5,358,648 - PFLU_RS23915 0.27 +1.6 5,358,648 - PFLU_RS23915 0.27 +1.3 5,358,648 - PFLU_RS23915 0.27 -0.5 5,358,648 - PFLU_RS23915 0.27 -0.6 5,358,648 - PFLU_RS23915 0.27 -1.1 5,358,648 - PFLU_RS23915 0.27 +0.5 5,358,648 - PFLU_RS23915 0.27 +0.1 5,358,648 - PFLU_RS23915 0.27 +0.1 5,358,689 + PFLU_RS23915 0.31 +0.6 5,358,690 - PFLU_RS23915 0.31 -0.1 5,358,690 - PFLU_RS23915 0.31 -0.5 5,358,967 + PFLU_RS23915 0.64 -0.2 5,358,968 - PFLU_RS23915 0.64 -0.1 5,358,968 - PFLU_RS23915 0.64 -0.2 5,359,291 + +0.4 5,359,291 + +0.5 5,359,291 + +0.3 5,359,292 - -0.1 5,359,292 - +0.1 5,359,292 - +0.2 5,359,292 - +0.7 5,359,292 - +0.3 5,359,322 + +1.1 5,359,322 + +1.3 5,359,322 + +1.9 5,359,322 + -0.1 5,359,322 + +0.2 5,359,322 + +0.7 5,359,322 + +0.5 5,359,322 + +0.7 5,359,322 + +0.5 5,359,322 + +0.9 5,359,322 + -0.3 5,359,323 - -1.4 5,359,323 - +1.1 5,359,323 - +0.8 5,359,323 - -0.8 5,359,323 - +0.4 5,359,323 - +2.0 5,359,323 - +0.0 5,359,323 - -0.4 5,359,323 - -0.7 5,359,323 - +0.3 5,359,334 + +0.4 5,359,334 + -0.8 5,359,334 + +0.1 5,359,334 + -0.5 5,359,334 + +0.4 5,359,334 + -0.0 5,359,335 - -0.4 5,359,335 - -2.3 5,359,337 + -0.6 5,359,337 + -0.8 5,359,337 + -1.0 5,359,337 + +0.6 5,359,338 - +1.1 5,359,338 - +0.5 5,359,338 - -0.8 5,359,365 + +1.0 5,359,365 + -0.9 5,359,365 + -0.7 5,359,365 + +0.2 5,359,365 + -0.7 5,359,365 + -0.5 5,359,365 + +0.1 5,359,366 - -0.7 5,359,366 - +0.3 5,359,478 - PFLU_RS23920 0.18 -2.3 5,359,498 - PFLU_RS23920 0.22 -0.9 5,359,498 - PFLU_RS23920 0.22 +0.6 5,359,905 + PFLU_RS23920 0.90 -1.3 5,359,905 + PFLU_RS23920 0.90 +0.1 5,359,905 + PFLU_RS23920 0.90 +0.3 5,359,905 + PFLU_RS23920 0.90 +0.7 5,359,905 + PFLU_RS23920 0.90 -0.1 5,359,906 - -1.2 5,359,906 - +0.3 5,359,909 + -0.2 5,359,909 + -0.5 5,359,909 + -1.0 5,359,909 + -1.2 5,359,910 - -1.1 5,359,910 - -0.0 5,359,910 - +0.2 5,359,910 - -1.0 5,359,974 - +0.4 5,359,974 - -0.6 5,359,974 - +0.1 5,359,974 - +0.0 5,359,974 - +0.2 5,360,074 + PFLU_RS23925 0.36 -0.7 5,360,074 + PFLU_RS23925 0.36 -1.0 5,360,075 - PFLU_RS23925 0.36 +0.4 5,360,075 - PFLU_RS23925 0.36 -0.9 5,360,075 - PFLU_RS23925 0.36 +0.3 5,360,075 - PFLU_RS23925 0.36 -1.9 5,360,075 - PFLU_RS23925 0.36 +0.6 5,360,204 + PFLU_RS23925 0.79 +0.1 5,360,204 + PFLU_RS23925 0.79 +0.0 5,360,205 - PFLU_RS23925 0.79 +0.4 5,360,205 - PFLU_RS23925 0.79 -0.2
Or see this region's nucleotide sequence