Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS23900 and PFLU_RS23905 are separated by 12 nucleotides PFLU_RS23905 and PFLU_RS23910 are separated by 0 nucleotides PFLU_RS23910 and PFLU_RS23915 are separated by 13 nucleotides
PFLU_RS23900: PFLU_RS23900 - SMC-Scp complex subunit ScpB, at 5,356,011 to 5,356,943
_RS23900
PFLU_RS23905: PFLU_RS23905 - segregation/condensation protein A, at 5,356,956 to 5,357,774
_RS23905
PFLU_RS23910: PFLU_RS23910 - threonylcarbamoyl-AMP synthase, at 5,357,775 to 5,358,404
_RS23910
PFLU_RS23915: PFLU_RS23915 - PHP domain-containing protein, at 5,358,418 to 5,359,281
_RS23915
Position (kb) 5356
5357
5358 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5356.003 kb on - strand at 5356.003 kb on - strand at 5356.003 kb on - strand at 5356.151 kb on + strand, within PFLU_RS23900 at 5356.152 kb on - strand, within PFLU_RS23900 at 5356.152 kb on - strand, within PFLU_RS23900 at 5356.152 kb on - strand, within PFLU_RS23900 at 5356.152 kb on - strand, within PFLU_RS23900 at 5356.437 kb on + strand, within PFLU_RS23900 at 5356.438 kb on - strand, within PFLU_RS23900 at 5356.669 kb on + strand, within PFLU_RS23900 at 5356.670 kb on - strand, within PFLU_RS23900 at 5356.725 kb on + strand, within PFLU_RS23900 at 5356.725 kb on + strand, within PFLU_RS23900 at 5356.725 kb on + strand, within PFLU_RS23900 at 5356.725 kb on + strand, within PFLU_RS23900 at 5356.726 kb on - strand, within PFLU_RS23900 at 5356.726 kb on - strand, within PFLU_RS23900 at 5356.726 kb on - strand, within PFLU_RS23900 at 5356.726 kb on - strand, within PFLU_RS23900 at 5356.726 kb on - strand, within PFLU_RS23900 at 5356.726 kb on - strand, within PFLU_RS23900 at 5356.726 kb on - strand, within PFLU_RS23900 at 5357.147 kb on + strand, within PFLU_RS23905 at 5357.147 kb on + strand, within PFLU_RS23905 at 5357.148 kb on - strand, within PFLU_RS23905 at 5357.148 kb on - strand, within PFLU_RS23905 at 5357.148 kb on - strand, within PFLU_RS23905 at 5357.148 kb on - strand, within PFLU_RS23905 at 5357.148 kb on - strand, within PFLU_RS23905 at 5357.339 kb on + strand, within PFLU_RS23905 at 5357.368 kb on + strand, within PFLU_RS23905 at 5357.368 kb on + strand, within PFLU_RS23905 at 5357.368 kb on + strand, within PFLU_RS23905 at 5357.369 kb on - strand, within PFLU_RS23905 at 5357.488 kb on + strand, within PFLU_RS23905 at 5357.488 kb on + strand, within PFLU_RS23905 at 5357.488 kb on + strand, within PFLU_RS23905 at 5357.488 kb on + strand, within PFLU_RS23905 at 5357.489 kb on - strand, within PFLU_RS23905 at 5357.489 kb on - strand, within PFLU_RS23905 at 5357.489 kb on - strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.533 kb on + strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.534 kb on - strand, within PFLU_RS23905 at 5357.542 kb on + strand, within PFLU_RS23905 at 5357.542 kb on + strand, within PFLU_RS23905 at 5357.542 kb on + strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.543 kb on - strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.605 kb on + strand, within PFLU_RS23905 at 5357.606 kb on - strand, within PFLU_RS23905 at 5357.606 kb on - strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.671 kb on + strand, within PFLU_RS23905 at 5357.672 kb on - strand, within PFLU_RS23905 at 5357.672 kb on - strand, within PFLU_RS23905 at 5357.672 kb on - strand, within PFLU_RS23905 at 5357.672 kb on - strand, within PFLU_RS23905 at 5357.707 kb on + strand at 5357.707 kb on + strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5357.708 kb on - strand at 5358.108 kb on - strand, within PFLU_RS23910 at 5358.108 kb on - strand, within PFLU_RS23910 at 5358.116 kb on - strand, within PFLU_RS23910 at 5358.116 kb on - strand, within PFLU_RS23910 at 5358.246 kb on + strand, within PFLU_RS23910 at 5358.246 kb on + strand, within PFLU_RS23910 at 5358.246 kb on + strand, within PFLU_RS23910 at 5358.247 kb on - strand, within PFLU_RS23910 at 5358.311 kb on - strand, within PFLU_RS23910 at 5358.311 kb on - strand, within PFLU_RS23910 at 5358.353 kb on + strand at 5358.354 kb on - strand at 5358.411 kb on + strand at 5358.412 kb on - strand at 5358.432 kb on + strand at 5358.645 kb on + strand, within PFLU_RS23915 at 5358.645 kb on + strand, within PFLU_RS23915 at 5358.645 kb on + strand, within PFLU_RS23915 at 5358.645 kb on + strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.646 kb on - strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.647 kb on + strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.648 kb on - strand, within PFLU_RS23915 at 5358.689 kb on + strand, within PFLU_RS23915 at 5358.690 kb on - strand, within PFLU_RS23915 at 5358.690 kb on - strand, within PFLU_RS23915
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 5,356,003 - +0.5 5,356,003 - -0.1 5,356,003 - -0.4 5,356,151 + PFLU_RS23900 0.15 +0.7 5,356,152 - PFLU_RS23900 0.15 +1.2 5,356,152 - PFLU_RS23900 0.15 +0.1 5,356,152 - PFLU_RS23900 0.15 +1.0 5,356,152 - PFLU_RS23900 0.15 +0.2 5,356,437 + PFLU_RS23900 0.46 -0.2 5,356,438 - PFLU_RS23900 0.46 +0.3 5,356,669 + PFLU_RS23900 0.71 +0.5 5,356,670 - PFLU_RS23900 0.71 +0.0 5,356,725 + PFLU_RS23900 0.77 +0.1 5,356,725 + PFLU_RS23900 0.77 -0.4 5,356,725 + PFLU_RS23900 0.77 +1.0 5,356,725 + PFLU_RS23900 0.77 +0.3 5,356,726 - PFLU_RS23900 0.77 -0.1 5,356,726 - PFLU_RS23900 0.77 -0.6 5,356,726 - PFLU_RS23900 0.77 -0.9 5,356,726 - PFLU_RS23900 0.77 +0.7 5,356,726 - PFLU_RS23900 0.77 -0.1 5,356,726 - PFLU_RS23900 0.77 -0.1 5,356,726 - PFLU_RS23900 0.77 +0.6 5,357,147 + PFLU_RS23905 0.23 -1.1 5,357,147 + PFLU_RS23905 0.23 -0.8 5,357,148 - PFLU_RS23905 0.23 -0.6 5,357,148 - PFLU_RS23905 0.23 +0.3 5,357,148 - PFLU_RS23905 0.23 -0.2 5,357,148 - PFLU_RS23905 0.23 -0.2 5,357,148 - PFLU_RS23905 0.23 +0.5 5,357,339 + PFLU_RS23905 0.47 -0.4 5,357,368 + PFLU_RS23905 0.50 -1.8 5,357,368 + PFLU_RS23905 0.50 -0.7 5,357,368 + PFLU_RS23905 0.50 +0.7 5,357,369 - PFLU_RS23905 0.50 +0.2 5,357,488 + PFLU_RS23905 0.65 +0.6 5,357,488 + PFLU_RS23905 0.65 +0.3 5,357,488 + PFLU_RS23905 0.65 -0.4 5,357,488 + PFLU_RS23905 0.65 -0.6 5,357,489 - PFLU_RS23905 0.65 -0.6 5,357,489 - PFLU_RS23905 0.65 +0.7 5,357,489 - PFLU_RS23905 0.65 +0.8 5,357,533 + PFLU_RS23905 0.70 +0.6 5,357,533 + PFLU_RS23905 0.70 +0.1 5,357,533 + PFLU_RS23905 0.70 +1.1 5,357,533 + PFLU_RS23905 0.70 +0.5 5,357,533 + PFLU_RS23905 0.70 -0.4 5,357,533 + PFLU_RS23905 0.70 +0.2 5,357,533 + PFLU_RS23905 0.70 -1.4 5,357,533 + PFLU_RS23905 0.70 -0.4 5,357,533 + PFLU_RS23905 0.70 +0.8 5,357,533 + PFLU_RS23905 0.70 +0.2 5,357,534 - PFLU_RS23905 0.71 -0.2 5,357,534 - PFLU_RS23905 0.71 -1.0 5,357,534 - PFLU_RS23905 0.71 +1.2 5,357,534 - PFLU_RS23905 0.71 -0.4 5,357,534 - PFLU_RS23905 0.71 -0.3 5,357,534 - PFLU_RS23905 0.71 +0.2 5,357,542 + PFLU_RS23905 0.72 -1.0 5,357,542 + PFLU_RS23905 0.72 +0.4 5,357,542 + PFLU_RS23905 0.72 +0.5 5,357,543 - PFLU_RS23905 0.72 -2.3 5,357,543 - PFLU_RS23905 0.72 +0.1 5,357,543 - PFLU_RS23905 0.72 -0.9 5,357,543 - PFLU_RS23905 0.72 -0.7 5,357,543 - PFLU_RS23905 0.72 +1.3 5,357,543 - PFLU_RS23905 0.72 -0.6 5,357,605 + PFLU_RS23905 0.79 +0.1 5,357,605 + PFLU_RS23905 0.79 -0.2 5,357,605 + PFLU_RS23905 0.79 -0.1 5,357,605 + PFLU_RS23905 0.79 +0.4 5,357,605 + PFLU_RS23905 0.79 -1.3 5,357,606 - PFLU_RS23905 0.79 -0.2 5,357,606 - PFLU_RS23905 0.79 -0.1 5,357,671 + PFLU_RS23905 0.87 -1.6 5,357,671 + PFLU_RS23905 0.87 -0.3 5,357,671 + PFLU_RS23905 0.87 -1.1 5,357,671 + PFLU_RS23905 0.87 -0.9 5,357,671 + PFLU_RS23905 0.87 +0.4 5,357,671 + PFLU_RS23905 0.87 -0.1 5,357,671 + PFLU_RS23905 0.87 -0.0 5,357,671 + PFLU_RS23905 0.87 +0.6 5,357,671 + PFLU_RS23905 0.87 +0.4 5,357,672 - PFLU_RS23905 0.87 -0.5 5,357,672 - PFLU_RS23905 0.87 -0.7 5,357,672 - PFLU_RS23905 0.87 +0.5 5,357,672 - PFLU_RS23905 0.87 -0.7 5,357,707 + -0.6 5,357,707 + -0.4 5,357,708 - -0.5 5,357,708 - +0.0 5,357,708 - +1.2 5,357,708 - +0.1 5,357,708 - -0.3 5,357,708 - +0.2 5,357,708 - +0.5 5,357,708 - +0.1 5,358,108 - PFLU_RS23910 0.53 +0.2 5,358,108 - PFLU_RS23910 0.53 -0.2 5,358,116 - PFLU_RS23910 0.54 +1.1 5,358,116 - PFLU_RS23910 0.54 -0.2 5,358,246 + PFLU_RS23910 0.75 -0.2 5,358,246 + PFLU_RS23910 0.75 -0.3 5,358,246 + PFLU_RS23910 0.75 +0.2 5,358,247 - PFLU_RS23910 0.75 -2.3 5,358,311 - PFLU_RS23910 0.85 -0.0 5,358,311 - PFLU_RS23910 0.85 +0.6 5,358,353 + -1.6 5,358,354 - +1.5 5,358,411 + +0.8 5,358,412 - -0.0 5,358,432 + -0.5 5,358,645 + PFLU_RS23915 0.26 +0.4 5,358,645 + PFLU_RS23915 0.26 +0.2 5,358,645 + PFLU_RS23915 0.26 -0.8 5,358,645 + PFLU_RS23915 0.26 -0.6 5,358,646 - PFLU_RS23915 0.26 -0.1 5,358,646 - PFLU_RS23915 0.26 +2.3 5,358,646 - PFLU_RS23915 0.26 -0.1 5,358,646 - PFLU_RS23915 0.26 -0.8 5,358,646 - PFLU_RS23915 0.26 +0.3 5,358,647 + PFLU_RS23915 0.27 -1.0 5,358,647 + PFLU_RS23915 0.27 +0.4 5,358,647 + PFLU_RS23915 0.27 +0.7 5,358,647 + PFLU_RS23915 0.27 -1.5 5,358,647 + PFLU_RS23915 0.27 +0.6 5,358,648 - PFLU_RS23915 0.27 +0.1 5,358,648 - PFLU_RS23915 0.27 -1.4 5,358,648 - PFLU_RS23915 0.27 -0.5 5,358,648 - PFLU_RS23915 0.27 -0.0 5,358,648 - PFLU_RS23915 0.27 +1.6 5,358,648 - PFLU_RS23915 0.27 +1.3 5,358,648 - PFLU_RS23915 0.27 -0.5 5,358,648 - PFLU_RS23915 0.27 -0.6 5,358,648 - PFLU_RS23915 0.27 -1.1 5,358,648 - PFLU_RS23915 0.27 +0.5 5,358,648 - PFLU_RS23915 0.27 +0.1 5,358,648 - PFLU_RS23915 0.27 +0.1 5,358,689 + PFLU_RS23915 0.31 +0.6 5,358,690 - PFLU_RS23915 0.31 -0.1 5,358,690 - PFLU_RS23915 0.31 -0.5
Or see this region's nucleotide sequence