Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS18460

Experiment: D,L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate (C)
4,180,396	+		PFLU_RS18455	0.30	+0.8
4,180,423	+		PFLU_RS18455	0.34	+0.6
4,180,423	+		PFLU_RS18455	0.34	+0.1
4,180,481	+		PFLU_RS18455	0.41	+0.8
4,180,482	-		PFLU_RS18455	0.41	+0.2
4,180,482	-		PFLU_RS18455	0.41	-0.2
4,180,482	-		PFLU_RS18455	0.41	+0.4
4,180,482	-		PFLU_RS18455	0.41	+0.7
4,180,482	-		PFLU_RS18455	0.41	+0.9
4,180,591	+		PFLU_RS18455	0.54	+0.3
4,180,591	+		PFLU_RS18455	0.54	-0.1
4,180,591	+		PFLU_RS18455	0.54	-0.0
4,180,591	+		PFLU_RS18455	0.54	-0.6
4,180,591	+		PFLU_RS18455	0.54	-0.2
4,180,591	+		PFLU_RS18455	0.54	-0.5
4,180,591	+		PFLU_RS18455	0.54	-0.4
4,180,591	+		PFLU_RS18455	0.54	-0.1
4,180,591	+		PFLU_RS18455	0.54	-1.4
4,180,592	-		PFLU_RS18455	0.54	+0.0
4,180,592	-		PFLU_RS18455	0.54	-0.2
4,180,592	-		PFLU_RS18455	0.54	+1.3
4,180,592	-		PFLU_RS18455	0.54	-0.5
4,180,592	-		PFLU_RS18455	0.54	+0.7
4,180,592	-		PFLU_RS18455	0.54	-0.6
4,180,592	-		PFLU_RS18455	0.54	+0.3
4,180,669	+		PFLU_RS18455	0.63	-0.1
4,180,669	+		PFLU_RS18455	0.63	+0.1
4,180,669	+		PFLU_RS18455	0.63	+0.9
4,180,670	-		PFLU_RS18455	0.64	+0.6
4,180,670	-		PFLU_RS18455	0.64	+0.7
4,180,717	+		PFLU_RS18455	0.69	-0.7
4,180,718	-		PFLU_RS18455	0.69	-1.1
4,180,732	+		PFLU_RS18455	0.71	+0.8
4,180,732	+		PFLU_RS18455	0.71	-0.1
4,180,732	+		PFLU_RS18455	0.71	+0.6
4,180,732	+		PFLU_RS18455	0.71	+0.2
4,180,732	+		PFLU_RS18455	0.71	+0.5
4,180,732	+		PFLU_RS18455	0.71	+0.6
4,180,733	-		PFLU_RS18455	0.71	-0.4
4,180,733	-		PFLU_RS18455	0.71	-0.3
4,180,733	-		PFLU_RS18455	0.71	-3.0
4,180,733	-		PFLU_RS18455	0.71	-0.4
4,180,733	-		PFLU_RS18455	0.71	-0.1
4,180,834	+		PFLU_RS18455	0.83	+0.5
4,180,834	+		PFLU_RS18455	0.83	-0.2
4,180,834	+		PFLU_RS18455	0.83	+0.6
4,180,834	+		PFLU_RS18455	0.83	-1.1
4,180,834	+		PFLU_RS18455	0.83	-0.3
4,180,834	+		PFLU_RS18455	0.83	-0.3
4,180,834	+		PFLU_RS18455	0.83	+0.4
4,180,834	+		PFLU_RS18455	0.83	-0.2
4,180,834	+		PFLU_RS18455	0.83	+0.1
4,180,835	-		PFLU_RS18455	0.84	-1.6
4,180,835	-		PFLU_RS18455	0.84	-2.9
4,180,835	-		PFLU_RS18455	0.84	+0.3
4,180,835	-		PFLU_RS18455	0.84	-0.0
4,180,835	-		PFLU_RS18455	0.84	-0.4
4,180,835	-		PFLU_RS18455	0.84	+0.6
4,180,835	-		PFLU_RS18455	0.84	-0.1
4,180,835	-		PFLU_RS18455	0.84	+0.9
4,180,835	-		PFLU_RS18455	0.84	-0.2
4,180,835	-		PFLU_RS18455	0.84	+0.6
4,180,835	-		PFLU_RS18455	0.84	+0.4
4,180,835	-		PFLU_RS18455	0.84	-0.2
4,180,889	+				-0.2
4,180,890	-				+0.0
4,180,890	-				-1.2
4,180,958	+				-0.8
4,180,958	+				+0.2
4,180,958	+				-0.3
4,180,958	+				-0.7
4,180,958	+				+0.1
4,181,011	+				-1.8
4,181,017	-				-0.6
4,181,017	-				-0.9
4,181,017	-				+0.1
4,181,155	+				-0.6
4,181,155	+				+1.5
4,181,155	+				-0.3
4,181,156	-				+0.6
4,181,156	-				+0.2
4,181,186	+				-1.6
4,181,187	-				+0.5
4,181,203	+				+0.6
4,181,204	-				-1.5
4,181,212	+				+0.6
4,181,237	+				-0.9
4,181,238	-				-0.5
4,181,238	-				-1.0
4,181,239	+				-1.1
4,181,240	-				-0.8
4,181,263	+				+0.0
4,181,263	+				+1.2
4,181,263	+				-0.8
4,181,264	-				+0.4
4,181,264	-				-0.4
4,181,264	-				-0.6
4,181,264	-				-0.1
4,181,264	-				-1.3
4,181,318	+				+0.8
4,181,319	-				-0.1
4,181,319	-				-0.2
4,181,368	-				-0.6
4,181,431	+		PFLU_RS18460	0.15	-0.6
4,181,431	+		PFLU_RS18460	0.15	-0.4
4,181,431	+		PFLU_RS18460	0.15	-1.2
4,181,431	+		PFLU_RS18460	0.15	+0.4
4,181,431	+		PFLU_RS18460	0.15	+1.1
4,181,431	+		PFLU_RS18460	0.15	-1.0
4,181,431	+		PFLU_RS18460	0.15	-0.4
4,181,431	+		PFLU_RS18460	0.15	+0.7
4,181,431	+		PFLU_RS18460	0.15	+0.0
4,181,431	+		PFLU_RS18460	0.15	+0.7
4,181,431	+		PFLU_RS18460	0.15	+0.9
4,181,432	-		PFLU_RS18460	0.15	-0.2
4,181,432	-		PFLU_RS18460	0.15	+0.8
4,181,432	-		PFLU_RS18460	0.15	+0.4
4,181,432	-		PFLU_RS18460	0.15	+0.3
4,181,432	-		PFLU_RS18460	0.15	-1.7
4,181,432	-		PFLU_RS18460	0.15	-0.5
4,181,432	-		PFLU_RS18460	0.15	+0.1
4,181,432	-		PFLU_RS18460	0.15	-1.6
4,181,432	-		PFLU_RS18460	0.15	+0.4
4,181,432	-		PFLU_RS18460	0.15	+0.5
4,181,432	-		PFLU_RS18460	0.15	-1.3
4,181,481	+		PFLU_RS18460	0.23	-0.6
4,181,635	+		PFLU_RS18460	0.49	+0.6
4,181,635	+		PFLU_RS18460	0.49	-0.3
4,181,635	+		PFLU_RS18460	0.49	+0.1
4,181,635	+		PFLU_RS18460	0.49	-0.7
4,181,635	+		PFLU_RS18460	0.49	-0.4
4,181,635	+		PFLU_RS18460	0.49	-0.2
4,181,635	+		PFLU_RS18460	0.49	-0.5
4,181,636	-		PFLU_RS18460	0.49	+0.2
4,181,636	-		PFLU_RS18460	0.49	-0.2
4,181,636	-		PFLU_RS18460	0.49	-0.9
4,181,636	-		PFLU_RS18460	0.49	-0.3
4,181,636	-		PFLU_RS18460	0.49	-0.5
4,181,636	-		PFLU_RS18460	0.49	-0.7
4,181,636	-		PFLU_RS18460	0.49	-0.3
4,181,636	-		PFLU_RS18460	0.49	+0.3
4,181,636	-		PFLU_RS18460	0.49	+0.4
4,181,680	+		PFLU_RS18460	0.56	+0.2
4,181,680	+		PFLU_RS18460	0.56	-1.2
4,181,681	-		PFLU_RS18460	0.56	+0.1
4,181,730	+		PFLU_RS18460	0.65	+0.4
4,181,730	+		PFLU_RS18460	0.65	+0.2
4,181,730	+		PFLU_RS18460	0.65	+0.3
4,181,730	+		PFLU_RS18460	0.65	-0.5
4,181,730	+		PFLU_RS18460	0.65	+0.4
4,181,730	+		PFLU_RS18460	0.65	-0.3
4,181,731	-		PFLU_RS18460	0.65	+0.2
4,181,731	-		PFLU_RS18460	0.65	+0.8
4,181,731	-		PFLU_RS18460	0.65	+1.0
4,181,731	-		PFLU_RS18460	0.65	-0.6
4,181,731	-		PFLU_RS18460	0.65	-0.5
4,181,731	-		PFLU_RS18460	0.65	-0.1
4,181,771	-		PFLU_RS18460	0.71	+0.5
4,181,771	-		PFLU_RS18460	0.71	-0.7
4,181,779	+		PFLU_RS18460	0.73	-0.6
4,181,779	+		PFLU_RS18460	0.73	+0.4
4,181,779	+		PFLU_RS18460	0.73	+0.3
4,181,779	+		PFLU_RS18460	0.73	+0.8
4,181,779	+		PFLU_RS18460	0.73	-1.0
4,181,780	-		PFLU_RS18460	0.73	-0.8
4,181,788	+		PFLU_RS18460	0.74	-0.1
4,181,788	+		PFLU_RS18460	0.74	-0.5
4,181,788	+		PFLU_RS18460	0.74	+0.3
4,181,788	+		PFLU_RS18460	0.74	+0.8
4,181,788	+		PFLU_RS18460	0.74	-1.5
4,181,788	+		PFLU_RS18460	0.74	-0.3
4,181,788	+		PFLU_RS18460	0.74	-0.9
4,181,788	+		PFLU_RS18460	0.74	-1.8
4,181,789	-		PFLU_RS18460	0.74	+1.0
4,181,789	-		PFLU_RS18460	0.74	-0.9
4,181,789	-		PFLU_RS18460	0.74	-1.2
4,181,789	-		PFLU_RS18460	0.74	-1.4
4,181,789	-		PFLU_RS18460	0.74	-1.0
4,181,789	-		PFLU_RS18460	0.74	+0.8
4,181,896	-				+1.3
4,181,932	+				+0.7
4,181,933	-				+0.5
4,181,933	-				-2.3
4,181,949	+				-0.2
4,181,950	-				+0.4
4,181,950	-				-0.5
4,182,043	+				-0.3
4,182,043	+				+1.0
4,182,044	-				+1.0
4,182,062	+				-0.1
4,182,063	-				+0.3
4,182,063	-				-0.1
4,182,063	-				+0.7
4,182,063	-				-0.8
4,182,066	+				-0.1
4,182,066	+				-1.1
4,182,066	+				+0.4
4,182,066	+				-0.0
4,182,066	+				+0.6
4,182,066	+				-1.6
4,182,066	+				-0.1
4,182,066	+				-0.5
4,182,066	+				-0.8
4,182,066	+				+0.6
4,182,066	+				-0.7
4,182,066	+				-0.5
4,182,067	-				-0.3
4,182,067	-				-0.1
4,182,067	-				+0.2
4,182,067	-				+0.6
4,182,067	-				+0.3
4,182,067	-				-0.2
4,182,067	-				-2.9
4,182,067	-				-0.7
4,182,067	-				-0.3
4,182,067	-				+1.1
4,182,067	-				+0.2
4,182,067	-				+0.7
4,182,067	-				+0.8
4,182,067	-				+0.6
4,182,067	-				+0.1
4,182,067	-				-0.4
4,182,067	-				+0.4
4,182,067	-				+0.6
4,182,067	-				-1.2
4,182,067	-				+0.8
4,182,067	-				+0.2
4,182,067	-				-0.2
4,182,067	-				+0.1
4,182,234	+		PFLU_RS18465	0.33	-0.5
4,182,234	+		PFLU_RS18465	0.33	+0.6
4,182,234	+		PFLU_RS18465	0.33	+0.3
4,182,235	-		PFLU_RS18465	0.33	-1.4
4,182,366	+		PFLU_RS18465	0.59	-1.6
4,182,367	-		PFLU_RS18465	0.60	-1.2
4,182,367	-		PFLU_RS18465	0.60	+0.2
4,182,396	+		PFLU_RS18465	0.65	+0.7
4,182,396	+		PFLU_RS18465	0.65	-1.4
4,182,396	+		PFLU_RS18465	0.65	-0.4
4,182,396	+		PFLU_RS18465	0.65	+0.1
4,182,396	+		PFLU_RS18465	0.65	-0.3
4,182,396	+		PFLU_RS18465	0.65	-0.6
4,182,396	+		PFLU_RS18465	0.65	+0.1
4,182,396	+		PFLU_RS18465	0.65	-0.2
4,182,396	+		PFLU_RS18465	0.65	-1.2
4,182,396	+		PFLU_RS18465	0.65	+0.2
4,182,397	-		PFLU_RS18465	0.66	-0.4
4,182,397	-		PFLU_RS18465	0.66	-2.0
4,182,397	-		PFLU_RS18465	0.66	-0.4
4,182,397	-		PFLU_RS18465	0.66	+0.4
4,182,397	-		PFLU_RS18465	0.66	-0.2
4,182,397	-		PFLU_RS18465	0.66	+0.8
4,182,397	-		PFLU_RS18465	0.66	+0.3
4,182,397	-		PFLU_RS18465	0.66	-0.3
4,182,397	-		PFLU_RS18465	0.66	-0.0
4,182,397	-		PFLU_RS18465	0.66	+0.4
4,182,397	-		PFLU_RS18465	0.66	+0.3
4,182,426	+		PFLU_RS18465	0.72	+1.2
4,182,426	+		PFLU_RS18465	0.72	+0.1
4,182,426	+		PFLU_RS18465	0.72	-2.4
4,182,426	+		PFLU_RS18465	0.72	-1.3
4,182,426	+		PFLU_RS18465	0.72	-0.2
4,182,427	-		PFLU_RS18465	0.72	-0.2
4,182,427	-		PFLU_RS18465	0.72	+0.1
4,182,427	-		PFLU_RS18465	0.72	+1.1
4,182,427	-		PFLU_RS18465	0.72	-0.1
4,182,427	-		PFLU_RS18465	0.72	-0.6
4,182,428	+		PFLU_RS18465	0.72	+0.1
4,182,428	+		PFLU_RS18465	0.72	-0.8
4,182,428	+		PFLU_RS18465	0.72	+0.1
4,182,428	+		PFLU_RS18465	0.72	+1.3
4,182,428	+		PFLU_RS18465	0.72	-0.1
4,182,428	+		PFLU_RS18465	0.72	+1.5
4,182,428	+		PFLU_RS18465	0.72	+0.2
4,182,428	+		PFLU_RS18465	0.72	+0.5
4,182,429	-		PFLU_RS18465	0.72	+0.7
4,182,429	-		PFLU_RS18465	0.72	-0.2
4,182,429	-		PFLU_RS18465	0.72	-0.8
4,182,429	-		PFLU_RS18465	0.72	-0.9
4,182,429	-		PFLU_RS18465	0.72	-0.5
4,182,429	-		PFLU_RS18465	0.72	-1.0
4,182,432	+		PFLU_RS18465	0.73	+1.0
4,182,432	+		PFLU_RS18465	0.73	+0.3
4,182,432	+		PFLU_RS18465	0.73	-0.3
4,182,432	+		PFLU_RS18465	0.73	+0.2
4,182,433	-		PFLU_RS18465	0.73	+0.5
4,182,433	-		PFLU_RS18465	0.73	-2.7
4,182,433	-		PFLU_RS18465	0.73	+1.2
4,182,508	-		PFLU_RS18465	0.88	+0.3
4,182,663	+				+0.0
4,182,663	+				-0.2
4,182,663	+				-2.2
4,182,663	+				-0.2
4,182,664	-				-0.2
4,182,664	-				+0.9
4,182,664	-				+0.6
4,182,664	-				+0.5
4,182,690	+				+0.6
4,182,691	-				+0.6
4,182,758	+				+0.2
4,182,758	+				-0.5
4,182,758	+				-0.9