Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28200

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
6,279,523	+		PFLU_RS28195	0.36	+0.7
6,279,523	+		PFLU_RS28195	0.36	+1.1
6,279,523	+		PFLU_RS28195	0.36	-0.3
6,279,523	+		PFLU_RS28195	0.36	-0.4
6,279,523	+		PFLU_RS28195	0.36	-0.4
6,279,523	+		PFLU_RS28195	0.36	+0.4
6,279,524	-		PFLU_RS28195	0.36	-0.8
6,279,524	-		PFLU_RS28195	0.36	+0.3
6,279,524	-		PFLU_RS28195	0.36	+0.6
6,279,524	-		PFLU_RS28195	0.36	+0.3
6,279,571	+		PFLU_RS28195	0.39	+0.3
6,279,571	+		PFLU_RS28195	0.39	+0.6
6,279,572	-		PFLU_RS28195	0.39	+1.2
6,279,572	-		PFLU_RS28195	0.39	-0.2
6,279,715	+		PFLU_RS28195	0.49	-0.2
6,279,715	+		PFLU_RS28195	0.49	+0.7
6,279,715	+		PFLU_RS28195	0.49	+0.7
6,279,715	+		PFLU_RS28195	0.49	-0.5
6,279,715	+		PFLU_RS28195	0.49	+0.2
6,279,716	-		PFLU_RS28195	0.50	+0.8
6,279,716	-		PFLU_RS28195	0.50	-0.4
6,279,716	-		PFLU_RS28195	0.50	-0.0
6,279,716	-		PFLU_RS28195	0.50	+0.4
6,279,716	-		PFLU_RS28195	0.50	-0.2
6,279,716	-		PFLU_RS28195	0.50	-0.3
6,279,716	-		PFLU_RS28195	0.50	-0.7
6,279,716	-		PFLU_RS28195	0.50	+1.2
6,279,716	-		PFLU_RS28195	0.50	+0.3
6,279,716	-		PFLU_RS28195	0.50	+0.2
6,279,716	-		PFLU_RS28195	0.50	-0.4
6,279,716	-		PFLU_RS28195	0.50	+0.1
6,279,727	+		PFLU_RS28195	0.50	-0.5
6,279,887	-		PFLU_RS28195	0.62	+0.4
6,279,937	+		PFLU_RS28195	0.65	+0.3
6,279,938	-		PFLU_RS28195	0.65	-0.7
6,279,982	+		PFLU_RS28195	0.68	+0.1
6,279,982	+		PFLU_RS28195	0.68	-0.7
6,279,982	+		PFLU_RS28195	0.68	-0.1
6,279,983	-		PFLU_RS28195	0.69	-0.6
6,279,983	-		PFLU_RS28195	0.69	-0.5
6,279,983	-		PFLU_RS28195	0.69	-0.1
6,280,029	+		PFLU_RS28195	0.72	+0.8
6,280,030	-		PFLU_RS28195	0.72	-0.8
6,280,030	-		PFLU_RS28195	0.72	+0.0
6,280,031	+		PFLU_RS28195	0.72	+0.1
6,280,031	+		PFLU_RS28195	0.72	+0.2
6,280,031	+		PFLU_RS28195	0.72	-0.3
6,280,032	-		PFLU_RS28195	0.72	-0.7
6,280,032	-		PFLU_RS28195	0.72	+0.1
6,280,032	-		PFLU_RS28195	0.72	+0.7
6,280,032	-		PFLU_RS28195	0.72	+0.8
6,280,223	+		PFLU_RS28195	0.86	-0.8
6,280,279	+		PFLU_RS28195	0.90	-0.2
6,280,280	-		PFLU_RS28195	0.90	-0.1
6,280,280	-		PFLU_RS28195	0.90	+0.3
6,280,280	-		PFLU_RS28195	0.90	+0.5
6,280,294	+				+0.0
6,280,295	-				-0.3
6,280,295	-				-0.0
6,280,426	+				-1.4
6,280,426	+				-1.2
6,280,426	+				+0.2
6,280,426	+				-0.4
6,280,427	-				-0.2
6,280,438	+				+0.1
6,280,439	-				-0.1
6,280,439	-				+0.4
6,280,439	-				+0.3
6,280,552	+		PFLU_RS28200	0.10	-1.0
6,280,552	+		PFLU_RS28200	0.10	+0.3
6,280,552	+		PFLU_RS28200	0.10	+0.9
6,280,552	+		PFLU_RS28200	0.10	+0.4
6,280,552	+		PFLU_RS28200	0.10	+0.3
6,280,552	+		PFLU_RS28200	0.10	+0.2
6,280,552	+		PFLU_RS28200	0.10	-0.9
6,280,552	+		PFLU_RS28200	0.10	+1.9
6,280,552	+		PFLU_RS28200	0.10	+1.1
6,280,552	+		PFLU_RS28200	0.10	+0.3
6,280,552	+		PFLU_RS28200	0.10	-0.4
6,280,552	+		PFLU_RS28200	0.10	+0.3
6,280,553	-		PFLU_RS28200	0.11	+0.5
6,280,553	-		PFLU_RS28200	0.11	+0.5
6,280,553	-		PFLU_RS28200	0.11	+0.2
6,280,553	-		PFLU_RS28200	0.11	-0.0
6,280,553	-		PFLU_RS28200	0.11	+0.7
6,280,553	-		PFLU_RS28200	0.11	+0.2
6,280,553	-		PFLU_RS28200	0.11	+0.2
6,280,553	-		PFLU_RS28200	0.11	-0.0
6,280,553	-		PFLU_RS28200	0.11	-0.5
6,280,553	-		PFLU_RS28200	0.11	+0.7
6,280,710	+		PFLU_RS28200	0.32	+0.1
6,281,194	+				-0.6
6,281,194	+				+0.1
6,281,195	-				+0.8
6,281,223	+				-0.0
6,281,223	+				+0.3
6,281,223	+				-0.2
6,281,223	+				+0.7
6,281,224	-				-1.2
6,281,224	-				-0.6
6,281,259	+				-0.1
6,281,259	+				-0.8
6,281,339	+		PFLU_RS28205	0.12	-1.7
6,281,339	+		PFLU_RS28205	0.12	-0.2
6,281,339	+		PFLU_RS28205	0.12	-0.8
6,281,435	+		PFLU_RS28205	0.23	+0.1
6,281,435	+		PFLU_RS28205	0.23	+0.1
6,281,528	+		PFLU_RS28205	0.33	-0.2
6,281,528	+		PFLU_RS28205	0.33	+0.1
6,281,528	+		PFLU_RS28205	0.33	-0.5
6,281,528	+		PFLU_RS28205	0.33	+0.3
6,281,529	-		PFLU_RS28205	0.33	-0.4
6,281,529	-		PFLU_RS28205	0.33	-0.2
6,281,529	-		PFLU_RS28205	0.33	-0.2
6,281,529	-		PFLU_RS28205	0.33	-0.7
6,281,529	-		PFLU_RS28205	0.33	+0.7
6,281,529	-		PFLU_RS28205	0.33	-0.6
6,281,529	-		PFLU_RS28205	0.33	+0.5
6,281,529	-		PFLU_RS28205	0.33	-0.3
6,281,601	+		PFLU_RS28205	0.41	-0.1
6,281,601	+		PFLU_RS28205	0.41	+0.9
6,281,601	+		PFLU_RS28205	0.41	+0.8
6,281,601	+		PFLU_RS28205	0.41	-1.3
6,281,602	-		PFLU_RS28205	0.42	+0.5
6,281,602	-		PFLU_RS28205	0.42	+0.4
6,281,602	-		PFLU_RS28205	0.42	-1.1
6,281,602	-		PFLU_RS28205	0.42	+0.2
6,281,624	+		PFLU_RS28205	0.44	+0.3
6,281,625	-		PFLU_RS28205	0.44	-0.6
6,281,625	-		PFLU_RS28205	0.44	+0.4
6,281,625	-		PFLU_RS28205	0.44	+0.8
6,281,625	-		PFLU_RS28205	0.44	+0.3
6,281,668	+		PFLU_RS28205	0.49	-0.2
6,281,668	+		PFLU_RS28205	0.49	+0.3
6,281,668	+		PFLU_RS28205	0.49	+0.0
6,281,669	-		PFLU_RS28205	0.49	+0.4
6,281,669	-		PFLU_RS28205	0.49	+0.0
6,281,669	-		PFLU_RS28205	0.49	+0.7
6,281,741	+		PFLU_RS28205	0.57	+0.1
6,281,742	-		PFLU_RS28205	0.57	-0.6
6,281,742	-		PFLU_RS28205	0.57	+0.7
6,281,745	+		PFLU_RS28205	0.57	-0.6
6,281,745	+		PFLU_RS28205	0.57	+0.3
6,281,745	+		PFLU_RS28205	0.57	+0.1
6,281,745	+		PFLU_RS28205	0.57	+1.5
6,281,745	+		PFLU_RS28205	0.57	-0.4
6,281,746	-		PFLU_RS28205	0.57	-0.2
6,281,746	-		PFLU_RS28205	0.57	+0.1
6,281,796	+		PFLU_RS28205	0.63	+0.1
6,281,797	-		PFLU_RS28205	0.63	+0.7
6,281,797	-		PFLU_RS28205	0.63	+0.2
6,281,841	+		PFLU_RS28205	0.68	+0.2
6,281,842	-		PFLU_RS28205	0.68	-0.0
6,281,867	+		PFLU_RS28205	0.71	-0.1
6,281,867	+		PFLU_RS28205	0.71	-0.3
6,281,867	+		PFLU_RS28205	0.71	+0.1
6,281,867	+		PFLU_RS28205	0.71	-0.4
6,281,868	-		PFLU_RS28205	0.71	+0.9
6,281,868	-		PFLU_RS28205	0.71	-0.6
6,281,868	-		PFLU_RS28205	0.71	-1.1
6,281,868	-		PFLU_RS28205	0.71	+0.2
6,281,975	+		PFLU_RS28205	0.83	+0.1
6,281,976	-		PFLU_RS28205	0.83	-0.4
6,281,976	-		PFLU_RS28205	0.83	-0.9
6,282,133	+				-0.5
6,282,133	+				+0.9
6,282,134	-				-0.0
6,282,134	-				+0.1