Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26150

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
5,843,223	+		PFLU_RS26140	0.81	+0.1
5,843,223	+		PFLU_RS26140	0.81	-0.5
5,843,223	+		PFLU_RS26140	0.81	-0.4
5,843,224	-		PFLU_RS26140	0.81	+0.5
5,843,224	-		PFLU_RS26140	0.81	+0.2
5,843,224	-		PFLU_RS26140	0.81	+0.6
5,843,224	-		PFLU_RS26140	0.81	+0.2
5,843,224	-		PFLU_RS26140	0.81	-0.3
5,843,224	-		PFLU_RS26140	0.81	+0.2
5,843,275	+		PFLU_RS26140	0.84	-1.2
5,843,276	-		PFLU_RS26140	0.84	-0.5
5,843,276	-		PFLU_RS26140	0.84	-1.1
5,843,276	-		PFLU_RS26140	0.84	+1.1
5,843,294	+		PFLU_RS26140	0.85	-0.9
5,843,294	+		PFLU_RS26140	0.85	+0.2
5,843,294	+		PFLU_RS26140	0.85	-1.0
5,843,391	+				-1.1
5,843,391	+				+0.8
5,843,391	+				+0.0
5,843,391	+				-0.8
5,843,392	-				-0.4
5,843,392	-				+0.6
5,843,392	-				-0.3
5,843,392	-				-0.0
5,843,392	-				+0.0
5,843,392	-				+0.2
5,843,433	+				+1.6
5,843,433	+				-0.2
5,843,434	-				-0.2
5,843,434	-				+0.8
5,843,460	+				-0.2
5,843,460	+				-0.3
5,843,460	+				-0.4
5,843,460	+				+0.1
5,843,460	+				+0.6
5,843,460	+				-1.1
5,843,460	+				-0.0
5,843,460	+				-0.6
5,843,460	+				-0.4
5,843,460	+				-0.6
5,843,460	+				-0.3
5,843,461	-				-0.3
5,843,461	-				+0.3
5,843,461	-				-0.1
5,843,461	-				+0.4
5,843,461	-				-0.2
5,843,494	-				+0.3
5,843,494	-				-1.1
5,843,562	+				+0.5
5,843,563	-				-1.7
5,843,573	+				+0.4
5,843,573	+				-0.0
5,843,573	+				-0.5
5,843,664	-		PFLU_RS26145	0.29	+1.5
5,843,838	+		PFLU_RS26145	0.84	+0.3
5,843,906	-				+0.2
5,843,906	-				-2.4
5,843,906	-				-0.7
5,843,946	-				-1.5
5,844,013	-				-0.4
5,844,029	+				-0.9
5,844,035	+				-0.0
5,844,036	-				+0.6
5,844,159	-				-0.6
5,844,159	-				-0.2
5,844,159	-				+0.8
5,844,159	-				+0.4
5,844,159	-				-0.8
5,844,159	-				-1.3
5,844,162	-				-0.3
5,844,162	-				+0.2
5,844,202	+				-0.2
5,844,202	+				+0.6
5,844,312	+				-0.5
5,844,312	+				-0.3
5,844,313	-				-0.1
5,844,421	+				-0.7
5,844,421	+				-0.1
5,844,421	+				+0.4
5,844,421	+				-0.8
5,844,421	+				+0.0
5,844,421	+				-0.3
5,844,421	+				-0.4
5,844,421	+				+0.7
5,844,421	+				-0.9
5,844,422	-				-0.5
5,844,422	-				-0.5
5,844,422	-				-1.2
5,844,422	-				-0.1
5,844,422	-				+1.2
5,844,422	-				-0.3
5,844,422	-				-2.6
5,844,422	-				-0.5
5,844,422	-				-0.2
5,844,425	+				+1.0
5,844,425	+				-1.6
5,844,425	+				-0.8
5,844,425	+				-0.8
5,844,426	-				-1.2
5,844,426	-				-0.3
5,844,426	-				+0.1
5,844,706	+		PFLU_RS26150	0.20	-0.5
5,844,707	-		PFLU_RS26150	0.20	-1.8
5,844,713	-		PFLU_RS26150	0.21	+0.1
5,844,855	-		PFLU_RS26150	0.26	-1.4
5,845,186	+		PFLU_RS26150	0.40	+0.4
5,845,186	+		PFLU_RS26150	0.40	-1.9
5,845,186	+		PFLU_RS26150	0.40	+0.4
5,845,186	+		PFLU_RS26150	0.40	+0.1
5,845,186	+		PFLU_RS26150	0.40	+0.3
5,845,186	+		PFLU_RS26150	0.40	-0.5
5,845,187	-		PFLU_RS26150	0.40	-0.8
5,845,187	-		PFLU_RS26150	0.40	-1.0
5,845,187	-		PFLU_RS26150	0.40	-1.2
5,845,187	-		PFLU_RS26150	0.40	+0.4
5,845,366	+		PFLU_RS26150	0.47	-1.3
5,845,367	-		PFLU_RS26150	0.47	-0.6
5,845,367	-		PFLU_RS26150	0.47	-0.9
5,845,367	-		PFLU_RS26150	0.47	+0.4
5,845,367	-		PFLU_RS26150	0.47	-0.4
5,845,369	+		PFLU_RS26150	0.48	-0.4
5,845,369	+		PFLU_RS26150	0.48	-1.1
5,845,369	+		PFLU_RS26150	0.48	-0.2
5,845,369	+		PFLU_RS26150	0.48	+0.4
5,845,370	-		PFLU_RS26150	0.48	-1.0
5,845,370	-		PFLU_RS26150	0.48	-0.2
5,845,370	-		PFLU_RS26150	0.48	-1.5
5,845,370	-		PFLU_RS26150	0.48	+1.1
5,845,370	-		PFLU_RS26150	0.48	+0.5
5,845,606	+		PFLU_RS26150	0.57	-1.7
5,845,606	+		PFLU_RS26150	0.57	+0.2
5,845,606	+		PFLU_RS26150	0.57	+0.2
5,845,606	+		PFLU_RS26150	0.57	+0.5
5,845,606	+		PFLU_RS26150	0.57	-0.6
5,845,606	+		PFLU_RS26150	0.57	-0.8
5,845,606	+		PFLU_RS26150	0.57	+0.7
5,845,606	+		PFLU_RS26150	0.57	-0.2
5,845,606	+		PFLU_RS26150	0.57	-0.3
5,845,607	-		PFLU_RS26150	0.57	+0.6
5,845,607	-		PFLU_RS26150	0.57	-0.4
5,845,607	-		PFLU_RS26150	0.57	+0.4
5,845,607	-		PFLU_RS26150	0.57	+0.6
5,845,607	-		PFLU_RS26150	0.57	-0.4
5,845,607	-		PFLU_RS26150	0.57	-0.0
5,845,607	-		PFLU_RS26150	0.57	+0.3
5,845,607	-		PFLU_RS26150	0.57	-0.3
5,845,615	+		PFLU_RS26150	0.58	-1.1
5,845,615	+		PFLU_RS26150	0.58	-0.6
5,845,615	+		PFLU_RS26150	0.58	+0.0
5,845,615	+		PFLU_RS26150	0.58	-0.4
5,845,615	+		PFLU_RS26150	0.58	-0.1
5,845,615	+		PFLU_RS26150	0.58	+0.6
5,845,616	-		PFLU_RS26150	0.58	+1.2
5,845,616	-		PFLU_RS26150	0.58	-0.2
5,845,616	-		PFLU_RS26150	0.58	+0.2
5,845,616	-		PFLU_RS26150	0.58	+0.7
5,845,616	-		PFLU_RS26150	0.58	-0.4
5,845,616	-		PFLU_RS26150	0.58	-0.6
5,845,616	-		PFLU_RS26150	0.58	-0.5
5,845,616	-		PFLU_RS26150	0.58	+0.6
5,845,639	+		PFLU_RS26150	0.59	+0.4
5,845,639	+		PFLU_RS26150	0.59	-1.2
5,845,639	+		PFLU_RS26150	0.59	-0.2
5,845,640	-		PFLU_RS26150	0.59	-2.0
5,845,640	-		PFLU_RS26150	0.59	+0.2
5,845,666	+		PFLU_RS26150	0.60	+0.2
5,845,666	+		PFLU_RS26150	0.60	-1.3
5,845,667	-		PFLU_RS26150	0.60	-0.6
5,845,667	-		PFLU_RS26150	0.60	-0.1
5,845,739	-		PFLU_RS26150	0.63	-1.5
5,845,739	-		PFLU_RS26150	0.63	-1.0
5,845,819	+		PFLU_RS26150	0.66	-0.2
5,845,819	+		PFLU_RS26150	0.66	+0.2
5,845,819	+		PFLU_RS26150	0.66	+0.5
5,845,819	+		PFLU_RS26150	0.66	-0.6
5,845,819	+		PFLU_RS26150	0.66	-0.7
5,845,819	+		PFLU_RS26150	0.66	+0.3
5,845,819	+		PFLU_RS26150	0.66	-0.2
5,845,819	+		PFLU_RS26150	0.66	-0.8
5,845,819	+		PFLU_RS26150	0.66	-0.7
5,845,819	+		PFLU_RS26150	0.66	-0.5
5,845,820	-		PFLU_RS26150	0.66	-0.7
5,845,820	-		PFLU_RS26150	0.66	+0.9
5,845,820	-		PFLU_RS26150	0.66	+0.6
5,845,820	-		PFLU_RS26150	0.66	-0.6
5,846,012	+		PFLU_RS26150	0.74	+0.6
5,846,012	+		PFLU_RS26150	0.74	+0.2
5,846,012	+		PFLU_RS26150	0.74	-0.2
5,846,013	-		PFLU_RS26150	0.74	-0.1
5,846,013	-		PFLU_RS26150	0.74	-0.1
5,846,013	-		PFLU_RS26150	0.74	+0.3
5,846,122	+		PFLU_RS26150	0.78	+0.9
5,846,122	+		PFLU_RS26150	0.78	-0.5
5,846,123	-		PFLU_RS26150	0.78	+0.2
5,846,179	+		PFLU_RS26150	0.81	-1.7
5,846,224	+		PFLU_RS26150	0.83	+0.3
5,846,224	+		PFLU_RS26150	0.83	-0.5
5,846,224	+		PFLU_RS26150	0.83	-0.9
5,846,224	+		PFLU_RS26150	0.83	-0.2
5,846,224	+		PFLU_RS26150	0.83	-0.1
5,846,224	+		PFLU_RS26150	0.83	-0.1
5,846,224	+		PFLU_RS26150	0.83	-0.4
5,846,224	+		PFLU_RS26150	0.83	-0.2
5,846,224	+		PFLU_RS26150	0.83	-1.0
5,846,225	-		PFLU_RS26150	0.83	-0.8
5,846,225	-		PFLU_RS26150	0.83	-0.4
5,846,225	-		PFLU_RS26150	0.83	+1.9
5,846,365	+		PFLU_RS26150	0.88	+0.6
5,846,365	+		PFLU_RS26150	0.88	+0.5
5,846,365	+		PFLU_RS26150	0.88	+0.1
5,846,365	+		PFLU_RS26150	0.88	+0.2
5,846,365	+		PFLU_RS26150	0.88	+0.5
5,846,365	+		PFLU_RS26150	0.88	-0.3
5,846,366	-		PFLU_RS26150	0.88	-0.8
5,846,366	-		PFLU_RS26150	0.88	+0.1
5,846,366	-		PFLU_RS26150	0.88	-0.3
5,846,366	-		PFLU_RS26150	0.88	-0.1
5,846,366	-		PFLU_RS26150	0.88	+0.3
5,846,366	-		PFLU_RS26150	0.88	-0.4
5,846,366	-		PFLU_RS26150	0.88	-0.1
5,846,366	-		PFLU_RS26150	0.88	-1.3
5,846,366	-		PFLU_RS26150	0.88	+0.3
5,846,366	-		PFLU_RS26150	0.88	+0.7
5,846,366	-		PFLU_RS26150	0.88	-0.1
5,846,470	+				-0.8
5,846,470	+				-0.2
5,846,659	+				-0.5
5,846,659	+				+0.1
5,846,659	+				-1.1
5,846,659	+				-1.5
5,846,659	+				+0.0
5,846,659	+				+0.3
5,846,659	+				+0.4
5,846,659	+				-0.1
5,846,659	+				-0.2
5,846,659	+				+0.0
5,846,659	+				+0.0
5,846,659	+				-2.7
5,846,659	+				+0.4
5,846,659	+				-1.4
5,846,659	+				-0.2
5,846,660	-				-0.6
5,846,660	-				-0.6
5,846,660	-				-0.8
5,846,660	-				-0.4
5,846,660	-				-0.1
5,846,660	-				+0.9
5,846,660	-				-0.3
5,846,660	-				+0.4
5,846,660	-				-0.9
5,846,660	-				+0.1
5,846,660	-				-0.1
5,846,784	+				-0.4
5,846,816	+				-0.1
5,846,842	+				+0.3
5,846,842	+				-0.7
5,846,843	-				-0.4
5,846,843	-				-0.6
5,846,843	-				-1.6
5,846,856	+				+0.5
5,846,857	-				+0.4
5,846,864	+				-1.1
5,846,904	+				-0.1
5,846,904	+				+0.0
5,846,904	+				-0.4
5,846,904	+				-0.1
5,846,905	-				-0.0
5,846,905	-				-1.6
5,846,905	-				+0.7
5,846,905	-				+0.6
5,846,905	-				-0.6
5,846,905	-				-0.3
5,846,917	+				+0.8
5,846,917	+				+0.2
5,846,917	+				+0.3
5,846,918	-				-1.7
5,846,918	-				-0.2
5,846,918	-				-0.7
5,846,918	-				-0.4
5,847,070	+		PFLU_RS26155	0.31	+0.3
5,847,070	+		PFLU_RS26155	0.31	-0.4
5,847,070	+		PFLU_RS26155	0.31	+0.5
5,847,070	+		PFLU_RS26155	0.31	+0.1
5,847,070	+		PFLU_RS26155	0.31	-0.1
5,847,070	+		PFLU_RS26155	0.31	+0.7
5,847,070	+		PFLU_RS26155	0.31	+0.6
5,847,070	+		PFLU_RS26155	0.31	-0.0
5,847,070	+		PFLU_RS26155	0.31	-0.1
5,847,071	-		PFLU_RS26155	0.31	-0.5
5,847,071	-		PFLU_RS26155	0.31	-1.2
5,847,071	-		PFLU_RS26155	0.31	-0.8
5,847,071	-		PFLU_RS26155	0.31	+0.2
5,847,140	+		PFLU_RS26155	0.45	+1.0
5,847,141	-		PFLU_RS26155	0.46	+0.0
5,847,230	+		PFLU_RS26155	0.64	-0.7
5,847,230	+		PFLU_RS26155	0.64	-0.6
5,847,230	+		PFLU_RS26155	0.64	-0.3
5,847,230	+		PFLU_RS26155	0.64	-0.3
5,847,230	+		PFLU_RS26155	0.64	-0.8
5,847,230	+		PFLU_RS26155	0.64	-0.1
5,847,230	+		PFLU_RS26155	0.64	-1.1
5,847,230	+		PFLU_RS26155	0.64	-0.8
5,847,231	-		PFLU_RS26155	0.64	+0.2
5,847,231	-		PFLU_RS26155	0.64	+0.6
5,847,231	-		PFLU_RS26155	0.64	-0.6
5,847,231	-		PFLU_RS26155	0.64	+0.0
5,847,231	-		PFLU_RS26155	0.64	+0.2
5,847,231	-		PFLU_RS26155	0.64	-0.3
5,847,231	-		PFLU_RS26155	0.64	-0.1
5,847,231	-		PFLU_RS26155	0.64	-0.4
5,847,231	-		PFLU_RS26155	0.64	+0.4
5,847,231	-		PFLU_RS26155	0.64	-1.9
5,847,231	-		PFLU_RS26155	0.64	+0.1
5,847,240	+		PFLU_RS26155	0.66	-0.2
5,847,389	+				+0.8
5,847,389	+				+0.6
5,847,389	+				-0.9
5,847,389	+				-0.4
5,847,390	-				+0.8
5,847,390	-				-1.5
5,847,390	-				+0.7
5,847,390	-				+0.6
5,847,390	-				+1.1
5,847,404	+				-0.4
5,847,405	-				+0.8
5,847,478	-				-0.9
5,847,487	+				-1.2
5,847,487	+				+0.5
5,847,487	+				+0.3
5,847,487	+				-0.6
5,847,487	+				-0.4
5,847,487	+				+0.8
5,847,487	+				+0.7
5,847,488	-				+0.4
5,847,488	-				-0.6
5,847,488	-				+0.2
5,847,488	-				+1.1
5,847,488	-				+0.4
5,847,488	-				-0.8
5,847,492	-				-0.9
5,847,492	-				-0.0