Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS24765

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
5,548,086	+		PFLU_RS24760	0.18	+0.5
5,548,087	-		PFLU_RS24760	0.18	-0.3
5,548,087	-		PFLU_RS24760	0.18	-0.1
5,548,087	-		PFLU_RS24760	0.18	+0.6
5,548,208	+		PFLU_RS24760	0.33	+0.6
5,548,218	+		PFLU_RS24760	0.34	-0.4
5,548,219	-		PFLU_RS24760	0.34	+0.1
5,548,219	-		PFLU_RS24760	0.34	+1.0
5,548,329	+		PFLU_RS24760	0.48	-0.2
5,548,505	+		PFLU_RS24760	0.69	+0.2
5,548,506	-		PFLU_RS24760	0.69	-0.2
5,548,527	+		PFLU_RS24760	0.72	-0.4
5,548,527	+		PFLU_RS24760	0.72	-0.1
5,548,527	+		PFLU_RS24760	0.72	-0.9
5,548,527	+		PFLU_RS24760	0.72	+0.4
5,548,527	+		PFLU_RS24760	0.72	-0.1
5,548,527	+		PFLU_RS24760	0.72	-0.8
5,548,527	+		PFLU_RS24760	0.72	-1.1
5,548,527	+		PFLU_RS24760	0.72	+0.2
5,548,527	+		PFLU_RS24760	0.72	-0.5
5,548,527	+		PFLU_RS24760	0.72	-0.5
5,548,527	+		PFLU_RS24760	0.72	-0.7
5,548,527	+		PFLU_RS24760	0.72	-0.3
5,548,527	+		PFLU_RS24760	0.72	+0.4
5,548,528	-		PFLU_RS24760	0.72	-0.2
5,548,528	-		PFLU_RS24760	0.72	+0.5
5,548,528	-		PFLU_RS24760	0.72	+0.3
5,548,528	-		PFLU_RS24760	0.72	+0.8
5,548,528	-		PFLU_RS24760	0.72	-0.1
5,548,528	-		PFLU_RS24760	0.72	-0.2
5,548,528	-		PFLU_RS24760	0.72	-0.4
5,548,528	-		PFLU_RS24760	0.72	+0.6
5,548,528	-		PFLU_RS24760	0.72	-1.0
5,548,528	-		PFLU_RS24760	0.72	+1.6
5,548,528	-		PFLU_RS24760	0.72	-0.2
5,548,575	-		PFLU_RS24760	0.78	+0.1
5,548,575	-		PFLU_RS24760	0.78	-0.5
5,548,840	-				+0.6
5,548,847	+				+1.0
5,548,914	+		PFLU_RS31070	0.23	+0.3
5,548,915	-		PFLU_RS31070	0.24	-0.6
5,549,011	+		PFLU_RS31070	0.66	+0.3
5,549,011	+		PFLU_RS31070	0.66	+0.0
5,549,011	+		PFLU_RS31070	0.66	+0.4
5,549,012	-		PFLU_RS31070	0.66	-1.7
5,549,025	-		PFLU_RS31070	0.72	-3.5
5,549,036	+		PFLU_RS31070	0.76	-1.1
5,549,063	+		PFLU_RS31070	0.88	+0.0
5,549,063	+		PFLU_RS31070	0.88	+0.1
5,549,064	-		PFLU_RS31070	0.89	-2.7
5,549,066	+		PFLU_RS31070	0.90	-0.2
5,549,066	+		PFLU_RS31070	0.90	+0.2
5,549,066	+		PFLU_RS31070	0.90	+0.5
5,549,066	+		PFLU_RS31070	0.90	+0.8
5,549,066	+		PFLU_RS31070	0.90	-0.8
5,549,066	+		PFLU_RS31070	0.90	-0.0
5,549,066	+		PFLU_RS31070	0.90	-0.4
5,549,067	-				-2.3
5,549,067	-				-3.2
5,549,067	-				-4.3
5,549,067	-				-3.9
5,549,067	-				-2.1
5,549,067	-				-1.0
5,549,067	-				-2.6
5,549,338	+		PFLU_RS24765	0.15	-3.4
5,549,338	+		PFLU_RS24765	0.15	-2.8
5,549,338	+		PFLU_RS24765	0.15	-3.7
5,549,338	+		PFLU_RS24765	0.15	-3.3
5,549,338	+		PFLU_RS24765	0.15	-1.9
5,549,338	+		PFLU_RS24765	0.15	-3.0
5,549,338	+		PFLU_RS24765	0.15	-2.5
5,549,338	+		PFLU_RS24765	0.15	-2.5
5,549,338	+		PFLU_RS24765	0.15	+0.8
5,549,338	+		PFLU_RS24765	0.15	-2.6
5,549,338	+		PFLU_RS24765	0.15	-1.7
5,549,338	+		PFLU_RS24765	0.15	-3.9
5,549,339	-		PFLU_RS24765	0.15	-1.3
5,549,339	-		PFLU_RS24765	0.15	-3.1
5,549,339	-		PFLU_RS24765	0.15	-4.5
5,549,339	-		PFLU_RS24765	0.15	-2.8
5,549,339	-		PFLU_RS24765	0.15	-2.4
5,549,339	-		PFLU_RS24765	0.15	-3.6
5,549,339	-		PFLU_RS24765	0.15	-3.4
5,549,342	+		PFLU_RS24765	0.15	-3.0
5,549,342	+		PFLU_RS24765	0.15	-2.9
5,549,342	+		PFLU_RS24765	0.15	-1.8
5,549,342	+		PFLU_RS24765	0.15	-2.7
5,549,342	+		PFLU_RS24765	0.15	-3.5
5,549,343	-		PFLU_RS24765	0.16	-3.1
5,549,469	+		PFLU_RS24765	0.23	-3.0
5,549,469	+		PFLU_RS24765	0.23	-4.0
5,549,469	+		PFLU_RS24765	0.23	-3.9
5,549,470	-		PFLU_RS24765	0.23	-4.1
5,549,470	-		PFLU_RS24765	0.23	-2.8
5,549,470	-		PFLU_RS24765	0.23	-3.1
5,549,503	+		PFLU_RS24765	0.25	-2.8
5,549,504	-		PFLU_RS24765	0.25	-1.6
5,549,504	-		PFLU_RS24765	0.25	-4.1
5,549,504	-		PFLU_RS24765	0.25	-3.4
5,549,504	-		PFLU_RS24765	0.25	-1.9
5,549,504	-		PFLU_RS24765	0.25	-2.9
5,549,568	+		PFLU_RS24765	0.29	-3.0
5,549,568	+		PFLU_RS24765	0.29	-2.1
5,549,568	+		PFLU_RS24765	0.29	-2.3
5,549,569	-		PFLU_RS24765	0.29	-0.4
5,549,569	-		PFLU_RS24765	0.29	-0.6
5,549,607	+		PFLU_RS24765	0.31	-2.5
5,549,751	+		PFLU_RS24765	0.40	-2.8
5,549,751	+		PFLU_RS24765	0.40	-3.6
5,549,751	+		PFLU_RS24765	0.40	-2.4
5,549,751	+		PFLU_RS24765	0.40	-2.8
5,549,751	+		PFLU_RS24765	0.40	-4.1
5,549,751	+		PFLU_RS24765	0.40	-3.1
5,549,751	+		PFLU_RS24765	0.40	-3.5
5,549,752	-		PFLU_RS24765	0.40	-3.4
5,549,752	-		PFLU_RS24765	0.40	-3.8
5,549,752	-		PFLU_RS24765	0.40	-4.7
5,549,752	-		PFLU_RS24765	0.40	-2.6
5,549,752	-		PFLU_RS24765	0.40	-3.5
5,549,752	-		PFLU_RS24765	0.40	-3.7
5,549,752	-		PFLU_RS24765	0.40	-3.0
5,549,752	-		PFLU_RS24765	0.40	-0.1
5,549,752	-		PFLU_RS24765	0.40	-1.0
5,549,752	-		PFLU_RS24765	0.40	-3.0
5,549,752	-		PFLU_RS24765	0.40	-2.1
5,549,752	-		PFLU_RS24765	0.40	-2.7
5,549,752	-		PFLU_RS24765	0.40	-3.3
5,549,752	-		PFLU_RS24765	0.40	-3.4
5,549,752	-		PFLU_RS24765	0.40	-3.3
5,549,752	-		PFLU_RS24765	0.40	-1.7
5,549,752	-		PFLU_RS24765	0.40	-4.6
5,549,752	-		PFLU_RS24765	0.40	-1.5
5,549,784	-		PFLU_RS24765	0.42	-2.1
5,549,954	+		PFLU_RS24765	0.52	-1.3
5,549,954	+		PFLU_RS24765	0.52	-3.3
5,549,954	+		PFLU_RS24765	0.52	-2.0
5,549,954	+		PFLU_RS24765	0.52	-4.8
5,549,954	+		PFLU_RS24765	0.52	-2.2
5,549,954	+		PFLU_RS24765	0.52	-4.6
5,549,954	+		PFLU_RS24765	0.52	-4.2
5,549,954	+		PFLU_RS24765	0.52	-2.6
5,549,954	+		PFLU_RS24765	0.52	-1.4
5,549,954	+		PFLU_RS24765	0.52	-2.8
5,549,954	+		PFLU_RS24765	0.52	-2.2
5,549,954	+		PFLU_RS24765	0.52	-2.9
5,549,954	+		PFLU_RS24765	0.52	-3.3
5,549,955	-		PFLU_RS24765	0.52	-3.3
5,549,955	-		PFLU_RS24765	0.52	-3.6
5,549,955	-		PFLU_RS24765	0.52	-2.9
5,549,955	-		PFLU_RS24765	0.52	-1.3
5,549,955	-		PFLU_RS24765	0.52	-2.2
5,549,958	+		PFLU_RS24765	0.52	-4.3
5,549,958	+		PFLU_RS24765	0.52	-2.8
5,549,958	+		PFLU_RS24765	0.52	-3.5
5,549,958	+		PFLU_RS24765	0.52	-1.7
5,549,958	+		PFLU_RS24765	0.52	-3.3
5,549,958	+		PFLU_RS24765	0.52	-3.0
5,549,958	+		PFLU_RS24765	0.52	-3.4
5,549,958	+		PFLU_RS24765	0.52	-3.1
5,549,958	+		PFLU_RS24765	0.52	-4.3
5,549,958	+		PFLU_RS24765	0.52	-3.6
5,549,958	+		PFLU_RS24765	0.52	-2.3
5,549,958	+		PFLU_RS24765	0.52	-2.8
5,549,959	-		PFLU_RS24765	0.52	-4.1
5,549,959	-		PFLU_RS24765	0.52	-1.4
5,549,959	-		PFLU_RS24765	0.52	-2.6
5,549,959	-		PFLU_RS24765	0.52	-1.2
5,549,959	-		PFLU_RS24765	0.52	-2.7
5,549,959	-		PFLU_RS24765	0.52	-2.8
5,549,959	-		PFLU_RS24765	0.52	-3.3
5,549,959	-		PFLU_RS24765	0.52	-1.6
5,549,959	-		PFLU_RS24765	0.52	-3.6
5,549,959	-		PFLU_RS24765	0.52	-4.4
5,549,959	-		PFLU_RS24765	0.52	-3.3
5,549,959	-		PFLU_RS24765	0.52	-4.2
5,549,959	-		PFLU_RS24765	0.52	-3.5
5,549,959	-		PFLU_RS24765	0.52	-1.1
5,549,959	-		PFLU_RS24765	0.52	-3.0
5,549,959	-		PFLU_RS24765	0.52	-3.8
5,549,959	-		PFLU_RS24765	0.52	-3.5
5,549,959	-		PFLU_RS24765	0.52	-4.5
5,550,060	+		PFLU_RS24765	0.58	-3.3
5,550,060	+		PFLU_RS24765	0.58	-2.2
5,550,060	+		PFLU_RS24765	0.58	-4.2
5,550,061	-		PFLU_RS24765	0.58	-3.2
5,550,061	-		PFLU_RS24765	0.58	-2.8
5,550,061	-		PFLU_RS24765	0.58	-3.9
5,550,061	-		PFLU_RS24765	0.58	-1.5
5,550,061	-		PFLU_RS24765	0.58	-1.6
5,550,061	-		PFLU_RS24765	0.58	-2.9
5,550,162	+		PFLU_RS24765	0.64	-2.3
5,550,162	+		PFLU_RS24765	0.64	-3.8
5,550,198	+		PFLU_RS24765	0.66	-1.4
5,550,198	+		PFLU_RS24765	0.66	-4.6
5,550,199	-		PFLU_RS24765	0.66	-3.0
5,550,199	-		PFLU_RS24765	0.66	-2.4
5,550,199	-		PFLU_RS24765	0.66	-2.7
5,550,316	+		PFLU_RS24765	0.73	-3.5
5,550,316	+		PFLU_RS24765	0.73	-3.8
5,550,316	+		PFLU_RS24765	0.73	-3.8
5,550,316	+		PFLU_RS24765	0.73	-3.4
5,550,316	+		PFLU_RS24765	0.73	-4.2
5,550,316	+		PFLU_RS24765	0.73	-3.7
5,550,317	-		PFLU_RS24765	0.74	-2.4
5,550,317	-		PFLU_RS24765	0.74	-3.9
5,550,366	+		PFLU_RS24765	0.76	-2.8
5,550,366	+		PFLU_RS24765	0.76	-0.7
5,550,366	+		PFLU_RS24765	0.76	-3.2
5,550,366	+		PFLU_RS24765	0.76	-2.1
5,550,366	+		PFLU_RS24765	0.76	-4.1
5,550,366	+		PFLU_RS24765	0.76	-1.3
5,550,366	+		PFLU_RS24765	0.76	-3.6
5,550,366	+		PFLU_RS24765	0.76	-2.8
5,550,367	-		PFLU_RS24765	0.76	-3.4
5,550,367	-		PFLU_RS24765	0.76	-3.7
5,550,367	-		PFLU_RS24765	0.76	-3.1
5,550,367	-		PFLU_RS24765	0.76	-3.4
5,550,388	-		PFLU_RS24765	0.78	-3.8
5,550,388	-		PFLU_RS24765	0.78	-2.2
5,550,388	-		PFLU_RS24765	0.78	-1.9
5,550,576	+		PFLU_RS24765	0.89	-0.2
5,550,576	+		PFLU_RS24765	0.89	-0.8
5,550,576	+		PFLU_RS24765	0.89	-1.2
5,550,577	-		PFLU_RS24765	0.89	-1.8
5,550,577	-		PFLU_RS24765	0.89	-2.8
5,550,577	-		PFLU_RS24765	0.89	-1.3
5,550,577	-		PFLU_RS24765	0.89	-2.9
5,550,577	-		PFLU_RS24765	0.89	-0.5
5,550,611	+				-3.3
5,550,611	+				-3.7
5,550,624	+				-3.9
5,550,624	+				-4.2
5,550,624	+				-3.9
5,550,672	-				-2.1
5,550,722	+				-1.0
5,550,722	+				-0.5
5,550,759	+				-0.2
5,550,773	-				-0.2
5,550,773	-				+0.5
5,550,773	-				-0.8
5,550,793	+				+0.5
5,550,875	+				+0.7
5,550,875	+				+0.5
5,550,875	+				+0.7
5,550,875	+				+1.7
5,550,875	+				+0.1
5,550,875	+				+0.7
5,550,875	+				+0.7
5,550,875	+				+1.0
5,550,875	+				-0.7
5,550,875	+				+0.3
5,550,875	+				+0.3
5,550,941	+				-0.2
5,550,941	+				+0.5
5,551,084	+		PFLU_RS24770	0.20	-1.2
5,551,084	+		PFLU_RS24770	0.20	-0.2
5,551,084	+		PFLU_RS24770	0.20	-0.3
5,551,085	-		PFLU_RS24770	0.20	+0.2
5,551,132	+		PFLU_RS24770	0.26	+0.7
5,551,132	+		PFLU_RS24770	0.26	+0.1
5,551,132	+		PFLU_RS24770	0.26	+0.2
5,551,132	+		PFLU_RS24770	0.26	-0.3
5,551,133	-		PFLU_RS24770	0.26	+0.4
5,551,133	-		PFLU_RS24770	0.26	+0.5
5,551,133	-		PFLU_RS24770	0.26	-0.3
5,551,133	-		PFLU_RS24770	0.26	+0.2
5,551,210	+		PFLU_RS24770	0.36	-0.3
5,551,210	+		PFLU_RS24770	0.36	-1.3
5,551,210	+		PFLU_RS24770	0.36	+0.6
5,551,210	+		PFLU_RS24770	0.36	-0.4
5,551,210	+		PFLU_RS24770	0.36	-0.5
5,551,210	+		PFLU_RS24770	0.36	+0.1
5,551,210	+		PFLU_RS24770	0.36	-0.7
5,551,210	+		PFLU_RS24770	0.36	+0.4
5,551,210	+		PFLU_RS24770	0.36	+0.4
5,551,210	+		PFLU_RS24770	0.36	-0.3
5,551,211	-		PFLU_RS24770	0.36	-1.6
5,551,211	-		PFLU_RS24770	0.36	-1.0
5,551,211	-		PFLU_RS24770	0.36	+0.6
5,551,211	-		PFLU_RS24770	0.36	+0.4
5,551,211	-		PFLU_RS24770	0.36	-0.2
5,551,211	-		PFLU_RS24770	0.36	-0.2
5,551,211	-		PFLU_RS24770	0.36	+0.6
5,551,211	-		PFLU_RS24770	0.36	+1.7
5,551,211	-		PFLU_RS24770	0.36	+0.3
5,551,212	+		PFLU_RS24770	0.36	+0.2
5,551,212	+		PFLU_RS24770	0.36	+0.9
5,551,212	+		PFLU_RS24770	0.36	-0.4
5,551,212	+		PFLU_RS24770	0.36	+0.3
5,551,212	+		PFLU_RS24770	0.36	+0.1
5,551,212	+		PFLU_RS24770	0.36	+1.3
5,551,212	+		PFLU_RS24770	0.36	+0.0
5,551,212	+		PFLU_RS24770	0.36	-0.7
5,551,212	+		PFLU_RS24770	0.36	+0.0
5,551,213	-		PFLU_RS24770	0.36	+0.4
5,551,213	-		PFLU_RS24770	0.36	-0.7
5,551,213	-		PFLU_RS24770	0.36	+1.4
5,551,213	-		PFLU_RS24770	0.36	+1.0
5,551,268	-		PFLU_RS24770	0.43	+0.3
5,551,333	+		PFLU_RS24770	0.52	-0.5
5,551,333	+		PFLU_RS24770	0.52	-1.1
5,551,333	+		PFLU_RS24770	0.52	+0.1
5,551,333	+		PFLU_RS24770	0.52	-0.2
5,551,333	+		PFLU_RS24770	0.52	-0.0
5,551,333	+		PFLU_RS24770	0.52	+1.6
5,551,333	+		PFLU_RS24770	0.52	-0.5
5,551,334	-		PFLU_RS24770	0.52	+0.2
5,551,334	-		PFLU_RS24770	0.52	+0.2
5,551,334	-		PFLU_RS24770	0.52	+0.0
5,551,334	-		PFLU_RS24770	0.52	+0.5
5,551,334	-		PFLU_RS24770	0.52	+0.0
5,551,334	-		PFLU_RS24770	0.52	-0.1
5,551,334	-		PFLU_RS24770	0.52	+0.8
5,551,334	-		PFLU_RS24770	0.52	-0.7
5,551,379	-		PFLU_RS24770	0.57	+0.0
5,551,379	-		PFLU_RS24770	0.57	-0.4
5,551,477	+		PFLU_RS24770	0.70	-0.4
5,551,477	+		PFLU_RS24770	0.70	-0.0
5,551,477	+		PFLU_RS24770	0.70	+0.3
5,551,477	+		PFLU_RS24770	0.70	+0.0
5,551,477	+		PFLU_RS24770	0.70	-0.2
5,551,477	+		PFLU_RS24770	0.70	+0.4
5,551,477	+		PFLU_RS24770	0.70	+0.6
5,551,478	-		PFLU_RS24770	0.70	+0.2
5,551,478	-		PFLU_RS24770	0.70	+0.9
5,551,478	-		PFLU_RS24770	0.70	-0.4
5,551,497	+		PFLU_RS24770	0.72	-1.0
5,551,497	+		PFLU_RS24770	0.72	-0.1
5,551,715	+				+0.4
5,551,716	-				+0.1
5,551,716	-				+0.1