Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS21675 and PFLU_RS21680 are separated by 568 nucleotides PFLU_RS21680 and PFLU_RS21685 are separated by 44 nucleotides PFLU_RS21685 and PFLU_RS21690 are separated by 18 nucleotides PFLU_RS21690 and PFLU_RS21695 are separated by 132 nucleotides
PFLU_RS21675: PFLU_RS21675 - flagellar biosynthesis protein FlhA, at 4,884,799 to 4,886,928
_RS21675
PFLU_RS21680: PFLU_RS21680 - hypothetical protein, at 4,887,497 to 4,887,739
_RS21680
PFLU_RS21685: PFLU_RS21685 - cold-shock protein, at 4,887,784 to 4,887,984
_RS21685
PFLU_RS21690: PFLU_RS21690 - DNA-binding protein, at 4,888,003 to 4,888,215
_RS21690
PFLU_RS21695: PFLU_RS21695 - flagellar biosynthesis protein FlhB, at 4,888,348 to 4,889,484
_RS21695
Position (kb) 4887
4888 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.561 kb on + strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.562 kb on - strand, within PFLU_RS21675 at 4886.565 kb on + strand, within PFLU_RS21675 at 4886.566 kb on - strand, within PFLU_RS21675 at 4886.566 kb on - strand, within PFLU_RS21675 at 4886.935 kb on + strand at 4887.076 kb on - strand at 4887.076 kb on - strand at 4887.104 kb on + strand at 4887.104 kb on + strand at 4887.104 kb on + strand at 4887.104 kb on + strand at 4887.105 kb on - strand at 4887.105 kb on - strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.229 kb on - strand at 4887.244 kb on + strand at 4887.244 kb on + strand at 4887.244 kb on + strand at 4887.244 kb on + strand at 4887.245 kb on - strand at 4887.253 kb on + strand at 4887.254 kb on - strand at 4887.254 kb on - strand at 4887.295 kb on + strand at 4887.295 kb on + strand at 4887.295 kb on + strand at 4887.296 kb on - strand at 4887.296 kb on - strand at 4887.296 kb on - strand at 4887.342 kb on + strand at 4887.343 kb on - strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.350 kb on - strand at 4887.350 kb on - strand at 4887.350 kb on - strand at 4887.350 kb on - strand at 4887.362 kb on + strand at 4887.363 kb on - strand at 4887.363 kb on - strand at 4887.393 kb on - strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.788 kb on - strand at 4887.788 kb on - strand at 4887.788 kb on - strand at 4887.788 kb on - strand at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.934 kb on - strand, within PFLU_RS21685 at 4887.957 kb on + strand, within PFLU_RS21685 at 4887.958 kb on - strand, within PFLU_RS21685 at 4887.958 kb on - strand, within PFLU_RS21685 at 4888.185 kb on - strand, within PFLU_RS21690 at 4888.263 kb on + strand at 4888.263 kb on + strand at 4888.263 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.311 kb on + strand at 4888.312 kb on - strand at 4888.445 kb on + strand at 4888.446 kb on - strand at 4888.453 kb on + strand at 4888.453 kb on + strand at 4888.454 kb on - strand at 4888.472 kb on + strand, within PFLU_RS21695 at 4888.472 kb on + strand, within PFLU_RS21695 at 4888.472 kb on + strand, within PFLU_RS21695 at 4888.473 kb on - strand, within PFLU_RS21695 at 4888.473 kb on - strand, within PFLU_RS21695 at 4888.511 kb on + strand, within PFLU_RS21695 at 4888.511 kb on + strand, within PFLU_RS21695 at 4888.511 kb on + strand, within PFLU_RS21695 at 4888.511 kb on + strand, within PFLU_RS21695 at 4888.512 kb on - strand, within PFLU_RS21695 at 4888.512 kb on - strand, within PFLU_RS21695 at 4888.512 kb on - strand, within PFLU_RS21695 at 4888.646 kb on + strand, within PFLU_RS21695 at 4888.647 kb on - strand, within PFLU_RS21695 at 4888.647 kb on - strand, within PFLU_RS21695 at 4888.664 kb on + strand, within PFLU_RS21695 at 4888.664 kb on + strand, within PFLU_RS21695 at 4888.664 kb on + strand, within PFLU_RS21695
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 4,886,561 + PFLU_RS21675 0.83 +1.2 4,886,561 + PFLU_RS21675 0.83 +1.3 4,886,561 + PFLU_RS21675 0.83 +0.8 4,886,561 + PFLU_RS21675 0.83 +0.3 4,886,561 + PFLU_RS21675 0.83 +0.7 4,886,561 + PFLU_RS21675 0.83 +0.6 4,886,561 + PFLU_RS21675 0.83 +0.7 4,886,561 + PFLU_RS21675 0.83 +1.2 4,886,561 + PFLU_RS21675 0.83 +1.2 4,886,561 + PFLU_RS21675 0.83 +1.0 4,886,561 + PFLU_RS21675 0.83 +1.0 4,886,561 + PFLU_RS21675 0.83 +0.4 4,886,561 + PFLU_RS21675 0.83 +1.0 4,886,561 + PFLU_RS21675 0.83 +1.8 4,886,561 + PFLU_RS21675 0.83 +0.5 4,886,561 + PFLU_RS21675 0.83 +1.6 4,886,561 + PFLU_RS21675 0.83 +1.4 4,886,562 - PFLU_RS21675 0.83 +0.8 4,886,562 - PFLU_RS21675 0.83 +1.3 4,886,562 - PFLU_RS21675 0.83 +1.0 4,886,562 - PFLU_RS21675 0.83 +0.2 4,886,562 - PFLU_RS21675 0.83 +1.0 4,886,562 - PFLU_RS21675 0.83 -0.1 4,886,562 - PFLU_RS21675 0.83 +1.5 4,886,562 - PFLU_RS21675 0.83 +1.4 4,886,562 - PFLU_RS21675 0.83 +0.3 4,886,562 - PFLU_RS21675 0.83 +0.7 4,886,562 - PFLU_RS21675 0.83 +1.2 4,886,562 - PFLU_RS21675 0.83 +0.7 4,886,562 - PFLU_RS21675 0.83 +1.7 4,886,562 - PFLU_RS21675 0.83 +0.7 4,886,562 - PFLU_RS21675 0.83 +0.7 4,886,562 - PFLU_RS21675 0.83 +0.9 4,886,562 - PFLU_RS21675 0.83 +1.4 4,886,565 + PFLU_RS21675 0.83 +0.2 4,886,566 - PFLU_RS21675 0.83 +0.9 4,886,566 - PFLU_RS21675 0.83 +0.3 4,886,935 + +1.4 4,887,076 - -0.4 4,887,076 - +0.1 4,887,104 + +0.1 4,887,104 + -0.4 4,887,104 + +0.8 4,887,104 + -1.3 4,887,105 - -0.8 4,887,105 - +0.8 4,887,120 + +0.3 4,887,120 + -0.0 4,887,120 + -0.8 4,887,120 + +1.0 4,887,120 + +0.3 4,887,120 + +0.2 4,887,120 + -0.3 4,887,120 + +0.4 4,887,121 - +0.5 4,887,121 - +0.4 4,887,121 - +0.3 4,887,121 - -0.4 4,887,121 - -0.1 4,887,121 - -0.1 4,887,121 - +0.5 4,887,121 - +0.4 4,887,121 - +0.6 4,887,121 - -0.6 4,887,121 - -0.5 4,887,121 - +0.9 4,887,121 - +0.1 4,887,121 - +0.3 4,887,124 + +0.0 4,887,124 + +0.1 4,887,124 + -0.2 4,887,124 + -0.9 4,887,124 + +0.4 4,887,124 + -1.1 4,887,124 + +0.1 4,887,124 + +0.3 4,887,124 + -0.5 4,887,125 - -0.1 4,887,125 - -0.9 4,887,125 - +0.3 4,887,125 - -0.3 4,887,125 - -0.6 4,887,229 - +1.2 4,887,244 + +1.0 4,887,244 + +0.1 4,887,244 + +0.0 4,887,244 + +0.9 4,887,245 - -0.2 4,887,253 + +0.2 4,887,254 - +0.3 4,887,254 - -0.1 4,887,295 + +0.8 4,887,295 + +0.5 4,887,295 + +0.2 4,887,296 - -0.2 4,887,296 - -0.1 4,887,296 - +0.6 4,887,342 + +1.4 4,887,343 - +0.8 4,887,349 + +0.5 4,887,349 + -0.2 4,887,349 + -1.6 4,887,349 + +0.3 4,887,349 + +1.2 4,887,349 + -0.6 4,887,349 + +1.3 4,887,350 - +0.0 4,887,350 - +0.1 4,887,350 - +1.3 4,887,350 - -0.3 4,887,362 + +1.2 4,887,363 - -0.6 4,887,363 - +1.2 4,887,393 - +0.2 4,887,479 + +0.2 4,887,479 + +0.5 4,887,479 + +0.3 4,887,479 + +0.5 4,887,479 + -0.6 4,887,479 + +0.5 4,887,479 + +0.1 4,887,480 - +0.5 4,887,480 - -0.9 4,887,480 - +0.0 4,887,480 - +0.2 4,887,480 - +0.1 4,887,480 - +0.8 4,887,480 - -0.5 4,887,480 - -0.8 4,887,787 + +0.0 4,887,787 + -0.3 4,887,787 + -1.5 4,887,787 + -1.9 4,887,788 - -0.2 4,887,788 - +0.2 4,887,788 - -0.8 4,887,788 - +0.3 4,887,907 + PFLU_RS21685 0.61 -1.0 4,887,907 + PFLU_RS21685 0.61 +0.4 4,887,907 + PFLU_RS21685 0.61 -0.2 4,887,907 + PFLU_RS21685 0.61 -0.2 4,887,907 + PFLU_RS21685 0.61 -0.4 4,887,907 + PFLU_RS21685 0.61 -0.0 4,887,907 + PFLU_RS21685 0.61 -0.1 4,887,907 + PFLU_RS21685 0.61 +0.4 4,887,907 + PFLU_RS21685 0.61 +0.2 4,887,907 + PFLU_RS21685 0.61 +0.2 4,887,907 + PFLU_RS21685 0.61 -0.2 4,887,907 + PFLU_RS21685 0.61 +0.1 4,887,907 + PFLU_RS21685 0.61 +0.3 4,887,907 + PFLU_RS21685 0.61 +0.0 4,887,907 + PFLU_RS21685 0.61 +0.7 4,887,907 + PFLU_RS21685 0.61 +0.5 4,887,907 + PFLU_RS21685 0.61 +0.2 4,887,907 + PFLU_RS21685 0.61 +0.1 4,887,907 + PFLU_RS21685 0.61 -0.1 4,887,907 + PFLU_RS21685 0.61 +0.2 4,887,908 - PFLU_RS21685 0.62 +0.8 4,887,908 - PFLU_RS21685 0.62 +0.1 4,887,908 - PFLU_RS21685 0.62 -1.5 4,887,908 - PFLU_RS21685 0.62 -0.8 4,887,908 - PFLU_RS21685 0.62 +0.3 4,887,908 - PFLU_RS21685 0.62 -0.3 4,887,908 - PFLU_RS21685 0.62 -0.5 4,887,908 - PFLU_RS21685 0.62 -0.5 4,887,908 - PFLU_RS21685 0.62 -0.1 4,887,908 - PFLU_RS21685 0.62 +0.6 4,887,908 - PFLU_RS21685 0.62 -0.1 4,887,908 - PFLU_RS21685 0.62 +0.7 4,887,934 - PFLU_RS21685 0.75 -0.2 4,887,957 + PFLU_RS21685 0.86 -1.0 4,887,958 - PFLU_RS21685 0.87 -0.2 4,887,958 - PFLU_RS21685 0.87 +0.1 4,888,185 - PFLU_RS21690 0.85 +0.4 4,888,263 + +1.2 4,888,263 + +0.4 4,888,263 + +0.2 4,888,266 + -0.7 4,888,266 + +0.0 4,888,266 + +0.1 4,888,266 + -0.8 4,888,266 + -0.5 4,888,266 + +0.0 4,888,266 + +0.1 4,888,266 + +0.0 4,888,267 - -0.1 4,888,267 - -1.3 4,888,267 - -1.6 4,888,267 - -0.4 4,888,311 + +0.4 4,888,312 - -1.1 4,888,445 + +1.2 4,888,446 - +1.9 4,888,453 + +0.9 4,888,453 + +0.9 4,888,454 - +1.1 4,888,472 + PFLU_RS21695 0.11 +1.3 4,888,472 + PFLU_RS21695 0.11 +0.8 4,888,472 + PFLU_RS21695 0.11 +1.0 4,888,473 - PFLU_RS21695 0.11 +1.4 4,888,473 - PFLU_RS21695 0.11 +1.1 4,888,511 + PFLU_RS21695 0.14 +1.0 4,888,511 + PFLU_RS21695 0.14 +0.7 4,888,511 + PFLU_RS21695 0.14 +0.8 4,888,511 + PFLU_RS21695 0.14 +1.2 4,888,512 - PFLU_RS21695 0.14 +1.0 4,888,512 - PFLU_RS21695 0.14 +0.4 4,888,512 - PFLU_RS21695 0.14 +1.2 4,888,646 + PFLU_RS21695 0.26 +1.2 4,888,647 - PFLU_RS21695 0.26 +0.9 4,888,647 - PFLU_RS21695 0.26 +0.9 4,888,664 + PFLU_RS21695 0.28 +0.3 4,888,664 + PFLU_RS21695 0.28 +1.1 4,888,664 + PFLU_RS21695 0.28 +1.4
Or see this region's nucleotide sequence