Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS21205 and PFLU_RS21210 are separated by 24 nucleotides PFLU_RS21210 and PFLU_RS21215 are separated by 59 nucleotides PFLU_RS21215 and PFLU_RS21220 are separated by 2 nucleotides PFLU_RS21220 and PFLU_RS21225 are separated by 129 nucleotides
PFLU_RS21205: PFLU_RS21205 - N-acetylglutaminylglutamine synthetase, at 4,772,028 to 4,773,761
_RS21205
PFLU_RS21210: PFLU_RS21210 - osmoprotectant NAGGN system M42 family peptidase, at 4,773,786 to 4,774,970
_RS21210
PFLU_RS21215: PFLU_RS21215 - YheU family protein, at 4,775,030 to 4,775,257
_RS21215
PFLU_RS21220: PFLU_RS21220 - carbon storage regulator CsrA, at 4,775,260 to 4,775,463
_RS21220
PFLU_RS21225: PFLU_RS21225 - SDR family oxidoreductase, at 4,775,593 to 4,776,408
_RS21225
Position (kb) 4773
4774
4775 Strain fitness (log2 ratio) -2
-1
0
1 at 4772.792 kb on + strand, within PFLU_RS21205 at 4772.792 kb on + strand, within PFLU_RS21205 at 4772.792 kb on + strand, within PFLU_RS21205 at 4772.792 kb on + strand, within PFLU_RS21205 at 4772.792 kb on + strand, within PFLU_RS21205 at 4772.793 kb on - strand, within PFLU_RS21205 at 4772.793 kb on - strand, within PFLU_RS21205 at 4772.793 kb on - strand, within PFLU_RS21205 at 4772.793 kb on - strand, within PFLU_RS21205 at 4772.793 kb on - strand, within PFLU_RS21205 at 4772.793 kb on - strand, within PFLU_RS21205 at 4772.793 kb on - strand, within PFLU_RS21205 at 4772.793 kb on - strand, within PFLU_RS21205 at 4772.853 kb on + strand, within PFLU_RS21205 at 4772.853 kb on + strand, within PFLU_RS21205 at 4772.854 kb on - strand, within PFLU_RS21205 at 4772.926 kb on + strand, within PFLU_RS21205 at 4772.927 kb on - strand, within PFLU_RS21205 at 4772.927 kb on - strand, within PFLU_RS21205 at 4772.927 kb on - strand, within PFLU_RS21205 at 4773.468 kb on + strand, within PFLU_RS21205 at 4773.469 kb on - strand, within PFLU_RS21205 at 4773.469 kb on - strand, within PFLU_RS21205 at 4773.469 kb on - strand, within PFLU_RS21205 at 4773.663 kb on + strand at 4773.663 kb on + strand at 4773.663 kb on + strand at 4773.664 kb on - strand at 4773.680 kb on + strand at 4773.755 kb on + strand at 4773.756 kb on - strand at 4773.786 kb on - strand at 4773.819 kb on + strand at 4773.891 kb on + strand at 4773.891 kb on + strand at 4773.892 kb on - strand at 4774.072 kb on + strand, within PFLU_RS21210 at 4774.072 kb on + strand, within PFLU_RS21210 at 4774.073 kb on - strand, within PFLU_RS21210 at 4774.242 kb on + strand, within PFLU_RS21210 at 4774.243 kb on - strand, within PFLU_RS21210 at 4774.243 kb on - strand, within PFLU_RS21210 at 4774.284 kb on - strand, within PFLU_RS21210 at 4774.293 kb on + strand, within PFLU_RS21210 at 4774.293 kb on + strand, within PFLU_RS21210 at 4774.293 kb on + strand, within PFLU_RS21210 at 4774.293 kb on + strand, within PFLU_RS21210 at 4774.293 kb on + strand, within PFLU_RS21210 at 4774.293 kb on + strand, within PFLU_RS21210 at 4774.293 kb on + strand, within PFLU_RS21210 at 4774.293 kb on + strand, within PFLU_RS21210 at 4774.294 kb on - strand, within PFLU_RS21210 at 4774.294 kb on - strand, within PFLU_RS21210 at 4774.294 kb on - strand, within PFLU_RS21210 at 4774.294 kb on - strand, within PFLU_RS21210 at 4774.294 kb on - strand, within PFLU_RS21210 at 4774.600 kb on - strand, within PFLU_RS21210 at 4774.600 kb on - strand, within PFLU_RS21210 at 4774.606 kb on - strand, within PFLU_RS21210 at 4774.606 kb on - strand, within PFLU_RS21210 at 4774.627 kb on + strand, within PFLU_RS21210 at 4774.628 kb on - strand, within PFLU_RS21210 at 4774.628 kb on - strand, within PFLU_RS21210 at 4774.628 kb on - strand, within PFLU_RS21210 at 4774.628 kb on - strand, within PFLU_RS21210 at 4774.678 kb on - strand, within PFLU_RS21210 at 4774.678 kb on - strand, within PFLU_RS21210 at 4774.680 kb on + strand, within PFLU_RS21210 at 4774.681 kb on - strand, within PFLU_RS21210 at 4774.681 kb on - strand, within PFLU_RS21210 at 4774.681 kb on - strand, within PFLU_RS21210 at 4774.681 kb on - strand, within PFLU_RS21210 at 4774.821 kb on + strand, within PFLU_RS21210 at 4774.821 kb on + strand, within PFLU_RS21210 at 4774.821 kb on + strand, within PFLU_RS21210 at 4774.822 kb on - strand, within PFLU_RS21210 at 4774.961 kb on + strand at 4774.961 kb on + strand at 4774.961 kb on + strand at 4774.961 kb on + strand at 4774.961 kb on + strand at 4774.961 kb on + strand at 4774.962 kb on - strand at 4774.962 kb on - strand at 4774.997 kb on + strand at 4774.998 kb on - strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.029 kb on + strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.030 kb on - strand at 4775.043 kb on - strand at 4775.043 kb on - strand at 4775.322 kb on - strand, within PFLU_RS21220 at 4775.322 kb on - strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.338 kb on + strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.339 kb on - strand, within PFLU_RS21220 at 4775.404 kb on + strand, within PFLU_RS21220 at 4775.405 kb on - strand, within PFLU_RS21220 at 4775.405 kb on - strand, within PFLU_RS21220 at 4775.405 kb on - strand, within PFLU_RS21220 at 4775.452 kb on + strand at 4775.476 kb on + strand at 4775.476 kb on + strand at 4775.476 kb on + strand at 4775.477 kb on - strand at 4775.477 kb on - strand at 4775.477 kb on - strand at 4775.477 kb on - strand at 4775.477 kb on - strand at 4775.479 kb on + strand at 4775.480 kb on - strand at 4775.480 kb on - strand at 4775.480 kb on - strand at 4775.554 kb on + strand at 4775.554 kb on + strand at 4775.554 kb on + strand at 4775.555 kb on - strand at 4775.555 kb on - strand at 4775.558 kb on + strand at 4775.558 kb on + strand at 4775.558 kb on + strand at 4775.559 kb on - strand at 4775.559 kb on - strand at 4775.559 kb on - strand at 4775.566 kb on + strand at 4775.567 kb on - strand at 4775.567 kb on - strand at 4775.655 kb on - strand at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.747 kb on + strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.748 kb on - strand, within PFLU_RS21225 at 4775.753 kb on + strand, within PFLU_RS21225 at 4775.753 kb on + strand, within PFLU_RS21225 at 4775.753 kb on + strand, within PFLU_RS21225 at 4775.753 kb on + strand, within PFLU_RS21225 at 4775.754 kb on - strand, within PFLU_RS21225 at 4775.754 kb on - strand, within PFLU_RS21225 at 4775.754 kb on - strand, within PFLU_RS21225 at 4775.754 kb on - strand, within PFLU_RS21225 at 4775.754 kb on - strand, within PFLU_RS21225 at 4775.935 kb on + strand, within PFLU_RS21225 at 4775.936 kb on - strand, within PFLU_RS21225 at 4775.960 kb on + strand, within PFLU_RS21225 at 4775.960 kb on + strand, within PFLU_RS21225 at 4775.960 kb on + strand, within PFLU_RS21225 at 4775.960 kb on + strand, within PFLU_RS21225 at 4775.961 kb on - strand, within PFLU_RS21225 at 4775.961 kb on - strand, within PFLU_RS21225 at 4775.961 kb on - strand, within PFLU_RS21225 at 4775.961 kb on - strand, within PFLU_RS21225 at 4775.961 kb on - strand, within PFLU_RS21225
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 4,772,792 + PFLU_RS21205 0.44 +0.1 4,772,792 + PFLU_RS21205 0.44 -0.5 4,772,792 + PFLU_RS21205 0.44 +0.1 4,772,792 + PFLU_RS21205 0.44 -0.5 4,772,792 + PFLU_RS21205 0.44 +0.4 4,772,793 - PFLU_RS21205 0.44 -1.4 4,772,793 - PFLU_RS21205 0.44 +0.0 4,772,793 - PFLU_RS21205 0.44 +0.4 4,772,793 - PFLU_RS21205 0.44 -0.8 4,772,793 - PFLU_RS21205 0.44 -0.8 4,772,793 - PFLU_RS21205 0.44 -0.1 4,772,793 - PFLU_RS21205 0.44 -0.3 4,772,793 - PFLU_RS21205 0.44 -0.0 4,772,853 + PFLU_RS21205 0.48 +0.3 4,772,853 + PFLU_RS21205 0.48 -0.1 4,772,854 - PFLU_RS21205 0.48 +0.4 4,772,926 + PFLU_RS21205 0.52 +0.2 4,772,927 - PFLU_RS21205 0.52 +0.3 4,772,927 - PFLU_RS21205 0.52 -0.3 4,772,927 - PFLU_RS21205 0.52 -0.7 4,773,468 + PFLU_RS21205 0.83 -0.8 4,773,469 - PFLU_RS21205 0.83 -0.3 4,773,469 - PFLU_RS21205 0.83 -0.5 4,773,469 - PFLU_RS21205 0.83 -0.1 4,773,663 + +1.2 4,773,663 + -0.5 4,773,663 + +1.0 4,773,664 - +0.0 4,773,680 + -0.6 4,773,755 + -1.2 4,773,756 - +0.3 4,773,786 - -0.7 4,773,819 + -0.1 4,773,891 + -0.4 4,773,891 + -1.1 4,773,892 - -1.7 4,774,072 + PFLU_RS21210 0.24 -1.1 4,774,072 + PFLU_RS21210 0.24 +0.9 4,774,073 - PFLU_RS21210 0.24 -0.1 4,774,242 + PFLU_RS21210 0.38 -0.4 4,774,243 - PFLU_RS21210 0.39 -2.6 4,774,243 - PFLU_RS21210 0.39 -0.6 4,774,284 - PFLU_RS21210 0.42 +0.1 4,774,293 + PFLU_RS21210 0.43 +0.3 4,774,293 + PFLU_RS21210 0.43 -1.1 4,774,293 + PFLU_RS21210 0.43 -0.5 4,774,293 + PFLU_RS21210 0.43 +0.5 4,774,293 + PFLU_RS21210 0.43 +0.0 4,774,293 + PFLU_RS21210 0.43 -0.1 4,774,293 + PFLU_RS21210 0.43 +0.0 4,774,293 + PFLU_RS21210 0.43 +0.7 4,774,294 - PFLU_RS21210 0.43 -0.1 4,774,294 - PFLU_RS21210 0.43 +0.9 4,774,294 - PFLU_RS21210 0.43 +0.2 4,774,294 - PFLU_RS21210 0.43 +0.7 4,774,294 - PFLU_RS21210 0.43 -0.7 4,774,600 - PFLU_RS21210 0.69 -0.3 4,774,600 - PFLU_RS21210 0.69 +0.5 4,774,606 - PFLU_RS21210 0.69 +0.2 4,774,606 - PFLU_RS21210 0.69 +0.6 4,774,627 + PFLU_RS21210 0.71 -0.9 4,774,628 - PFLU_RS21210 0.71 +0.1 4,774,628 - PFLU_RS21210 0.71 +0.3 4,774,628 - PFLU_RS21210 0.71 -0.3 4,774,628 - PFLU_RS21210 0.71 -0.0 4,774,678 - PFLU_RS21210 0.75 +0.2 4,774,678 - PFLU_RS21210 0.75 -0.3 4,774,680 + PFLU_RS21210 0.75 -0.0 4,774,681 - PFLU_RS21210 0.76 -0.2 4,774,681 - PFLU_RS21210 0.76 -0.0 4,774,681 - PFLU_RS21210 0.76 +0.2 4,774,681 - PFLU_RS21210 0.76 +0.2 4,774,821 + PFLU_RS21210 0.87 +1.1 4,774,821 + PFLU_RS21210 0.87 -0.9 4,774,821 + PFLU_RS21210 0.87 -0.1 4,774,822 - PFLU_RS21210 0.87 +0.3 4,774,961 + -0.9 4,774,961 + +0.1 4,774,961 + +0.3 4,774,961 + +1.1 4,774,961 + +0.3 4,774,961 + -0.0 4,774,962 - -0.0 4,774,962 - +0.9 4,774,997 + -0.1 4,774,998 - -0.4 4,775,029 + -0.2 4,775,029 + -0.1 4,775,029 + +0.5 4,775,029 + +0.2 4,775,029 + +0.7 4,775,029 + +1.0 4,775,029 + -0.2 4,775,029 + +0.3 4,775,029 + +0.2 4,775,029 + +0.4 4,775,029 + -1.0 4,775,029 + +0.5 4,775,029 + +0.9 4,775,029 + +0.1 4,775,029 + -0.4 4,775,029 + -0.6 4,775,029 + +0.1 4,775,029 + +0.7 4,775,029 + +0.6 4,775,030 - -1.7 4,775,030 - -0.6 4,775,030 - +1.2 4,775,030 - +0.5 4,775,030 - -0.3 4,775,030 - -0.5 4,775,030 - -0.7 4,775,030 - +0.2 4,775,030 - -1.5 4,775,030 - +0.1 4,775,030 - +0.3 4,775,043 - -1.0 4,775,043 - -0.8 4,775,322 - PFLU_RS21220 0.30 -0.1 4,775,322 - PFLU_RS21220 0.30 +0.7 4,775,338 + PFLU_RS21220 0.38 +0.4 4,775,338 + PFLU_RS21220 0.38 -0.2 4,775,338 + PFLU_RS21220 0.38 +0.5 4,775,338 + PFLU_RS21220 0.38 -0.3 4,775,338 + PFLU_RS21220 0.38 -0.2 4,775,338 + PFLU_RS21220 0.38 +0.9 4,775,338 + PFLU_RS21220 0.38 -1.0 4,775,338 + PFLU_RS21220 0.38 +0.4 4,775,338 + PFLU_RS21220 0.38 -0.1 4,775,338 + PFLU_RS21220 0.38 -0.3 4,775,339 - PFLU_RS21220 0.39 -0.5 4,775,339 - PFLU_RS21220 0.39 +0.9 4,775,339 - PFLU_RS21220 0.39 +0.4 4,775,339 - PFLU_RS21220 0.39 -0.6 4,775,339 - PFLU_RS21220 0.39 -0.3 4,775,339 - PFLU_RS21220 0.39 -0.6 4,775,339 - PFLU_RS21220 0.39 +1.7 4,775,339 - PFLU_RS21220 0.39 -0.9 4,775,339 - PFLU_RS21220 0.39 +0.5 4,775,339 - PFLU_RS21220 0.39 -0.2 4,775,339 - PFLU_RS21220 0.39 -0.0 4,775,339 - PFLU_RS21220 0.39 +0.1 4,775,404 + PFLU_RS21220 0.71 +0.6 4,775,405 - PFLU_RS21220 0.71 -0.6 4,775,405 - PFLU_RS21220 0.71 -1.2 4,775,405 - PFLU_RS21220 0.71 +0.6 4,775,452 + +0.8 4,775,476 + +0.5 4,775,476 + +1.0 4,775,476 + -1.4 4,775,477 - +0.0 4,775,477 - -0.5 4,775,477 - -0.1 4,775,477 - +0.5 4,775,477 - -0.3 4,775,479 + +0.5 4,775,480 - +0.0 4,775,480 - +0.1 4,775,480 - -0.0 4,775,554 + +0.1 4,775,554 + +0.5 4,775,554 + -0.1 4,775,555 - +0.3 4,775,555 - -1.3 4,775,558 + +0.1 4,775,558 + +0.5 4,775,558 + +0.2 4,775,559 - -0.4 4,775,559 - +0.7 4,775,559 - -0.7 4,775,566 + -0.3 4,775,567 - -0.5 4,775,567 - -0.1 4,775,655 - -0.4 4,775,747 + PFLU_RS21225 0.19 +0.4 4,775,747 + PFLU_RS21225 0.19 -2.5 4,775,747 + PFLU_RS21225 0.19 -1.3 4,775,747 + PFLU_RS21225 0.19 -0.2 4,775,747 + PFLU_RS21225 0.19 -0.5 4,775,747 + PFLU_RS21225 0.19 +0.1 4,775,747 + PFLU_RS21225 0.19 -0.5 4,775,747 + PFLU_RS21225 0.19 +0.1 4,775,747 + PFLU_RS21225 0.19 -1.1 4,775,747 + PFLU_RS21225 0.19 -0.5 4,775,747 + PFLU_RS21225 0.19 -0.2 4,775,747 + PFLU_RS21225 0.19 +0.5 4,775,747 + PFLU_RS21225 0.19 -0.9 4,775,748 - PFLU_RS21225 0.19 +0.1 4,775,748 - PFLU_RS21225 0.19 +0.1 4,775,748 - PFLU_RS21225 0.19 -0.8 4,775,748 - PFLU_RS21225 0.19 -0.3 4,775,748 - PFLU_RS21225 0.19 +0.1 4,775,748 - PFLU_RS21225 0.19 +0.2 4,775,748 - PFLU_RS21225 0.19 +0.2 4,775,748 - PFLU_RS21225 0.19 -0.8 4,775,748 - PFLU_RS21225 0.19 +0.1 4,775,748 - PFLU_RS21225 0.19 +1.5 4,775,753 + PFLU_RS21225 0.20 +0.6 4,775,753 + PFLU_RS21225 0.20 -0.1 4,775,753 + PFLU_RS21225 0.20 -0.1 4,775,753 + PFLU_RS21225 0.20 -1.6 4,775,754 - PFLU_RS21225 0.20 -0.8 4,775,754 - PFLU_RS21225 0.20 +0.7 4,775,754 - PFLU_RS21225 0.20 +0.8 4,775,754 - PFLU_RS21225 0.20 -0.3 4,775,754 - PFLU_RS21225 0.20 +0.1 4,775,935 + PFLU_RS21225 0.42 +0.8 4,775,936 - PFLU_RS21225 0.42 +0.2 4,775,960 + PFLU_RS21225 0.45 -0.0 4,775,960 + PFLU_RS21225 0.45 +0.1 4,775,960 + PFLU_RS21225 0.45 -1.5 4,775,960 + PFLU_RS21225 0.45 -0.1 4,775,961 - PFLU_RS21225 0.45 +0.4 4,775,961 - PFLU_RS21225 0.45 -0.2 4,775,961 - PFLU_RS21225 0.45 +0.4 4,775,961 - PFLU_RS21225 0.45 -0.1 4,775,961 - PFLU_RS21225 0.45 -0.0
Or see this region's nucleotide sequence