Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS19175 and PFLU_RS19180 are separated by 399 nucleotides PFLU_RS19180 and PFLU_RS19185 are separated by 77 nucleotides PFLU_RS19185 and PFLU_RS19190 are separated by 57 nucleotides PFLU_RS19190 and PFLU_RS19195 are separated by 32 nucleotides PFLU_RS19195 and PFLU_RS19200 are separated by 279 nucleotides
PFLU_RS19175: PFLU_RS19175 - trigger factor, at 4,337,012 to 4,338,322
_RS19175
PFLU_RS19180: PFLU_RS19180 - tRNA-His, at 4,338,722 to 4,338,797
_RS19180
PFLU_RS19185: PFLU_RS19185 - tRNA-Leu, at 4,338,875 to 4,338,959
_RS19185
PFLU_RS19190: PFLU_RS19190 - tRNA-His, at 4,339,017 to 4,339,092
_RS19190
PFLU_RS19195: PFLU_RS19195 - tRNA-Arg, at 4,339,125 to 4,339,201
_RS19195
PFLU_RS19200: PFLU_RS19200 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD, at 4,339,481 to 4,340,335
_RS19200
Position (kb) 4339
4340 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 4338.040 kb on + strand, within PFLU_RS19175 at 4338.040 kb on + strand, within PFLU_RS19175 at 4338.040 kb on + strand, within PFLU_RS19175 at 4338.040 kb on + strand, within PFLU_RS19175 at 4338.041 kb on - strand, within PFLU_RS19175 at 4338.041 kb on - strand, within PFLU_RS19175 at 4338.041 kb on - strand, within PFLU_RS19175 at 4338.096 kb on + strand, within PFLU_RS19175 at 4338.096 kb on + strand, within PFLU_RS19175 at 4338.096 kb on + strand, within PFLU_RS19175 at 4338.096 kb on + strand, within PFLU_RS19175 at 4338.097 kb on - strand, within PFLU_RS19175 at 4338.097 kb on - strand, within PFLU_RS19175 at 4338.299 kb on - strand at 4338.299 kb on - strand at 4338.299 kb on - strand at 4338.301 kb on + strand at 4338.301 kb on + strand at 4338.302 kb on - strand at 4338.302 kb on - strand at 4338.302 kb on - strand at 4338.326 kb on + strand at 4338.327 kb on - strand at 4338.386 kb on + strand at 4338.387 kb on - strand at 4338.387 kb on - strand at 4338.387 kb on - strand at 4338.413 kb on + strand at 4338.422 kb on + strand at 4338.423 kb on - strand at 4338.423 kb on - strand at 4338.446 kb on + strand at 4338.488 kb on + strand at 4338.488 kb on + strand at 4338.488 kb on + strand at 4338.488 kb on + strand at 4338.488 kb on + strand at 4338.489 kb on - strand at 4338.489 kb on - strand at 4338.489 kb on - strand at 4338.489 kb on - strand at 4338.489 kb on - strand at 4338.489 kb on - strand at 4338.489 kb on - strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.525 kb on + strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.526 kb on - strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.527 kb on + strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.528 kb on - strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.529 kb on + strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.530 kb on - strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.531 kb on + strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.532 kb on - strand at 4338.606 kb on + strand at 4338.606 kb on + strand at 4338.606 kb on + strand at 4338.606 kb on + strand at 4338.607 kb on - strand at 4338.607 kb on - strand at 4338.607 kb on - strand at 4338.607 kb on - strand at 4338.607 kb on - strand at 4338.610 kb on + strand at 4338.610 kb on + strand at 4338.610 kb on + strand at 4338.610 kb on + strand at 4338.610 kb on + strand at 4338.610 kb on + strand at 4338.610 kb on + strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.611 kb on - strand at 4338.614 kb on + strand at 4338.615 kb on - strand at 4338.645 kb on + strand at 4338.663 kb on - strand at 4338.675 kb on - strand at 4338.826 kb on - strand at 4338.826 kb on - strand at 4338.872 kb on - strand at 4338.872 kb on - strand at 4338.973 kb on - strand at 4338.973 kb on - strand at 4339.016 kb on - strand at 4339.104 kb on - strand at 4339.104 kb on - strand at 4339.123 kb on - strand at 4339.205 kb on - strand at 4339.205 kb on - strand at 4339.208 kb on - strand at 4339.229 kb on - strand at 4339.229 kb on - strand at 4339.229 kb on - strand at 4339.236 kb on - strand at 4339.236 kb on - strand at 4339.236 kb on - strand at 4339.236 kb on - strand at 4339.236 kb on - strand at 4339.236 kb on - strand at 4339.236 kb on - strand at 4339.236 kb on - strand at 4339.236 kb on - strand at 4339.295 kb on - strand at 4339.295 kb on - strand at 4339.295 kb on - strand at 4339.374 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 4,338,040 + PFLU_RS19175 0.78 -0.3 4,338,040 + PFLU_RS19175 0.78 -0.4 4,338,040 + PFLU_RS19175 0.78 -1.5 4,338,040 + PFLU_RS19175 0.78 +0.6 4,338,041 - PFLU_RS19175 0.78 +0.0 4,338,041 - PFLU_RS19175 0.78 -1.2 4,338,041 - PFLU_RS19175 0.78 -1.0 4,338,096 + PFLU_RS19175 0.83 -1.5 4,338,096 + PFLU_RS19175 0.83 -0.8 4,338,096 + PFLU_RS19175 0.83 -1.8 4,338,096 + PFLU_RS19175 0.83 -0.5 4,338,097 - PFLU_RS19175 0.83 -1.1 4,338,097 - PFLU_RS19175 0.83 -1.8 4,338,299 - +0.2 4,338,299 - -0.2 4,338,299 - -0.8 4,338,301 + +0.4 4,338,301 + -1.0 4,338,302 - +0.1 4,338,302 - +0.2 4,338,302 - -1.4 4,338,326 + +0.2 4,338,327 - -0.8 4,338,386 + -1.7 4,338,387 - -0.9 4,338,387 - -1.1 4,338,387 - +0.7 4,338,413 + +1.1 4,338,422 + -0.1 4,338,423 - +0.6 4,338,423 - -0.7 4,338,446 + -0.3 4,338,488 + +1.1 4,338,488 + -1.4 4,338,488 + +0.9 4,338,488 + -0.5 4,338,488 + +0.2 4,338,489 - +0.1 4,338,489 - +0.9 4,338,489 - +0.3 4,338,489 - +0.9 4,338,489 - -0.4 4,338,489 - -1.8 4,338,489 - -0.8 4,338,525 + +0.6 4,338,525 + -0.3 4,338,525 + -0.8 4,338,525 + +0.3 4,338,525 + +0.5 4,338,525 + +0.8 4,338,525 + -0.3 4,338,525 + -0.3 4,338,525 + +0.1 4,338,525 + -0.6 4,338,525 + -0.0 4,338,525 + +0.4 4,338,525 + +0.5 4,338,526 - -0.5 4,338,526 - -0.5 4,338,526 - -0.3 4,338,526 - +1.3 4,338,526 - -1.2 4,338,526 - -0.2 4,338,526 - -0.4 4,338,526 - -0.4 4,338,526 - +0.5 4,338,526 - +0.9 4,338,526 - -0.2 4,338,526 - -1.8 4,338,526 - -1.2 4,338,526 - +0.1 4,338,526 - -1.8 4,338,526 - +1.5 4,338,526 - +0.1 4,338,526 - -0.2 4,338,526 - -0.5 4,338,526 - +0.1 4,338,527 + +0.1 4,338,527 + +0.2 4,338,527 + +0.4 4,338,527 + +0.6 4,338,527 + +0.3 4,338,527 + -0.2 4,338,527 + +0.2 4,338,527 + +0.3 4,338,527 + +0.5 4,338,527 + +0.2 4,338,527 + -1.0 4,338,527 + +0.4 4,338,527 + +0.2 4,338,527 + -0.0 4,338,527 + -0.0 4,338,527 + -0.3 4,338,527 + +0.6 4,338,527 + -0.4 4,338,527 + +0.0 4,338,527 + -0.3 4,338,527 + +0.5 4,338,527 + +0.7 4,338,527 + -0.6 4,338,527 + -0.7 4,338,527 + +0.0 4,338,527 + +0.2 4,338,527 + +0.3 4,338,527 + -0.2 4,338,527 + -0.2 4,338,527 + -0.2 4,338,527 + -0.6 4,338,527 + -1.0 4,338,528 - -0.0 4,338,528 - +0.8 4,338,528 - +0.9 4,338,528 - +0.2 4,338,528 - +0.4 4,338,528 - +0.2 4,338,528 - -0.3 4,338,528 - +0.0 4,338,528 - -0.3 4,338,528 - -0.1 4,338,528 - -0.8 4,338,528 - +0.2 4,338,528 - -0.5 4,338,528 - -0.5 4,338,528 - +0.7 4,338,528 - -2.1 4,338,528 - -0.3 4,338,528 - +0.5 4,338,528 - +0.5 4,338,528 - +0.7 4,338,528 - -1.0 4,338,528 - +0.4 4,338,528 - -0.4 4,338,528 - -0.7 4,338,528 - -0.4 4,338,529 + -1.1 4,338,529 + -0.3 4,338,529 + -0.7 4,338,529 + +1.5 4,338,529 + +0.0 4,338,529 + +0.4 4,338,529 + +0.2 4,338,529 + -0.3 4,338,529 + +0.0 4,338,529 + +0.4 4,338,529 + -1.3 4,338,529 + -0.7 4,338,529 + +0.4 4,338,529 + -0.1 4,338,529 + +4.6 4,338,529 + +0.5 4,338,529 + -0.0 4,338,529 + +0.6 4,338,529 + -0.5 4,338,529 + -0.2 4,338,529 + -0.4 4,338,529 + +0.5 4,338,530 - -0.3 4,338,530 - -1.1 4,338,530 - +0.6 4,338,530 - +0.7 4,338,530 - +0.7 4,338,530 - -0.1 4,338,530 - +0.3 4,338,530 - -0.5 4,338,530 - -1.0 4,338,530 - -1.8 4,338,530 - -1.2 4,338,530 - +0.7 4,338,530 - -1.0 4,338,530 - +0.6 4,338,530 - +1.1 4,338,530 - -1.4 4,338,531 + -0.3 4,338,531 + +0.1 4,338,531 + +0.0 4,338,531 + +0.4 4,338,531 + +0.8 4,338,531 + -0.1 4,338,531 + +0.0 4,338,531 + +0.5 4,338,531 + -0.7 4,338,531 + +0.5 4,338,531 + -0.5 4,338,531 + +0.9 4,338,531 + -0.4 4,338,531 + +0.4 4,338,531 + -0.0 4,338,531 + -1.3 4,338,531 + -0.4 4,338,531 + -0.5 4,338,532 - +0.5 4,338,532 - +1.1 4,338,532 - +0.7 4,338,532 - -0.3 4,338,532 - -0.2 4,338,532 - -0.1 4,338,532 - +0.1 4,338,532 - -0.5 4,338,532 - -0.9 4,338,532 - -1.4 4,338,532 - +0.3 4,338,532 - -0.1 4,338,532 - -0.3 4,338,532 - +0.5 4,338,532 - -0.1 4,338,532 - +0.1 4,338,532 - +0.5 4,338,532 - -1.5 4,338,606 + -0.0 4,338,606 + +0.9 4,338,606 + +0.2 4,338,606 + +0.3 4,338,607 - +0.1 4,338,607 - +0.4 4,338,607 - -1.7 4,338,607 - -1.1 4,338,607 - -1.3 4,338,610 + +0.1 4,338,610 + +0.2 4,338,610 + +0.7 4,338,610 + +1.0 4,338,610 + +0.3 4,338,610 + +0.3 4,338,610 + -2.3 4,338,611 - +0.9 4,338,611 - +0.2 4,338,611 - -0.2 4,338,611 - -0.1 4,338,611 - +0.2 4,338,611 - +0.8 4,338,611 - +0.4 4,338,611 - -0.4 4,338,611 - -0.5 4,338,611 - -0.2 4,338,614 + +0.4 4,338,615 - +0.4 4,338,645 + +0.0 4,338,663 - +0.7 4,338,675 - -0.7 4,338,826 - -0.3 4,338,826 - +0.2 4,338,872 - +0.5 4,338,872 - -0.2 4,338,973 - -1.5 4,338,973 - +0.9 4,339,016 - -1.9 4,339,104 - -0.0 4,339,104 - -0.2 4,339,123 - +0.0 4,339,205 - -0.4 4,339,205 - +0.2 4,339,208 - +0.4 4,339,229 - +0.0 4,339,229 - +0.4 4,339,229 - -1.0 4,339,236 - -1.7 4,339,236 - +1.5 4,339,236 - -0.4 4,339,236 - +0.6 4,339,236 - -0.1 4,339,236 - -0.4 4,339,236 - -0.8 4,339,236 - +0.4 4,339,236 - -0.6 4,339,295 - +1.4 4,339,295 - -0.5 4,339,295 - +0.5 4,339,374 - -0.4
Or see this region's nucleotide sequence