Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS16400

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,717,628	+		PFLU_RS16390	0.85	+1.6
3,717,628	+		PFLU_RS16390	0.85	+0.0
3,717,628	+		PFLU_RS16390	0.85	-1.0
3,717,742	+		PFLU_RS16395	0.12	-0.3
3,717,742	+		PFLU_RS16395	0.12	-1.0
3,717,742	+		PFLU_RS16395	0.12	+0.3
3,717,743	-		PFLU_RS16395	0.12	+0.5
3,717,743	-		PFLU_RS16395	0.12	-1.8
3,717,743	-		PFLU_RS16395	0.12	-0.0
3,717,743	-		PFLU_RS16395	0.12	-0.1
3,717,745	+		PFLU_RS16395	0.12	-0.0
3,717,745	+		PFLU_RS16395	0.12	-0.6
3,717,796	-		PFLU_RS16395	0.24	+0.9
3,718,054	+		PFLU_RS16395	0.82	+0.8
3,718,054	+		PFLU_RS16395	0.82	-0.5
3,718,055	-		PFLU_RS16395	0.82	-0.3
3,718,055	-		PFLU_RS16395	0.82	+0.3
3,718,120	+				+0.3
3,718,121	-				-1.4
3,718,121	-				-0.2
3,718,131	+				-1.4
3,718,131	+				-0.6
3,718,131	+				-0.3
3,718,131	+				+0.2
3,718,131	+				-0.9
3,718,131	+				+0.2
3,718,131	+				-0.7
3,718,132	-				-0.0
3,718,132	-				+1.0
3,718,132	-				-1.2
3,718,132	-				+0.1
3,718,132	-				+0.8
3,718,132	-				+0.0
3,718,132	-				+0.8
3,718,157	-				-0.3
3,718,157	-				+0.1
3,718,250	+				+0.6
3,718,250	+				-0.4
3,718,250	+				-0.7
3,718,251	-				-0.4
3,718,251	-				-0.2
3,718,251	-				+1.3
3,718,251	-				-0.6
3,718,251	-				-0.2
3,718,251	-				-0.5
3,718,337	+		PFLU_RS16400	0.16	+0.3
3,718,337	+		PFLU_RS16400	0.16	-0.1
3,718,338	-		PFLU_RS16400	0.16	+0.2
3,718,338	-		PFLU_RS16400	0.16	+0.2
3,718,339	+		PFLU_RS16400	0.16	+0.0
3,718,339	+		PFLU_RS16400	0.16	-0.5
3,718,340	-		PFLU_RS16400	0.16	+0.0
3,718,340	-		PFLU_RS16400	0.16	+0.0
3,718,340	-		PFLU_RS16400	0.16	+0.3
3,718,512	-		PFLU_RS16400	0.33	-1.1
3,718,512	-		PFLU_RS16400	0.33	+1.4
3,718,517	+		PFLU_RS16400	0.34	-0.4
3,718,517	+		PFLU_RS16400	0.34	+0.1
3,718,517	+		PFLU_RS16400	0.34	+0.2
3,718,518	-		PFLU_RS16400	0.34	-2.0
3,718,541	-		PFLU_RS16400	0.36	-1.0
3,718,541	-		PFLU_RS16400	0.36	+0.0
3,718,637	+		PFLU_RS16400	0.46	+0.9
3,718,637	+		PFLU_RS16400	0.46	+0.5
3,718,638	-		PFLU_RS16400	0.46	+0.2
3,718,638	-		PFLU_RS16400	0.46	+0.5
3,718,733	+		PFLU_RS16400	0.55	-0.6
3,718,734	-		PFLU_RS16400	0.55	-0.8
3,718,775	+		PFLU_RS16400	0.60	-1.2
3,718,775	+		PFLU_RS16400	0.60	-1.7
3,718,775	+		PFLU_RS16400	0.60	+0.0
3,718,775	+		PFLU_RS16400	0.60	+0.5
3,718,776	-		PFLU_RS16400	0.60	-1.1
3,718,790	+		PFLU_RS16400	0.61	-0.4
3,718,790	+		PFLU_RS16400	0.61	-0.1
3,718,790	+		PFLU_RS16400	0.61	+0.3
3,718,790	+		PFLU_RS16400	0.61	+0.1
3,718,790	+		PFLU_RS16400	0.61	-0.3
3,718,790	+		PFLU_RS16400	0.61	-0.6
3,718,790	+		PFLU_RS16400	0.61	-0.5
3,718,790	+		PFLU_RS16400	0.61	-0.2
3,718,790	+		PFLU_RS16400	0.61	+0.0
3,718,790	+		PFLU_RS16400	0.61	-0.5
3,718,790	+		PFLU_RS16400	0.61	+0.3
3,718,790	+		PFLU_RS16400	0.61	+0.4
3,718,790	+		PFLU_RS16400	0.61	-0.5
3,718,790	+		PFLU_RS16400	0.61	+1.7
3,718,790	+		PFLU_RS16400	0.61	-0.7
3,718,790	+		PFLU_RS16400	0.61	+0.8
3,718,790	+		PFLU_RS16400	0.61	-0.5
3,718,790	+		PFLU_RS16400	0.61	-1.0
3,718,790	+		PFLU_RS16400	0.61	+0.1
3,718,790	+		PFLU_RS16400	0.61	+0.6
3,718,790	+		PFLU_RS16400	0.61	-0.5
3,718,790	+		PFLU_RS16400	0.61	+0.5
3,718,790	+		PFLU_RS16400	0.61	-0.9
3,718,790	+		PFLU_RS16400	0.61	-0.5
3,718,790	+		PFLU_RS16400	0.61	+0.1
3,718,790	+		PFLU_RS16400	0.61	-0.3
3,718,790	+		PFLU_RS16400	0.61	+0.4
3,718,791	-		PFLU_RS16400	0.61	-0.6
3,718,791	-		PFLU_RS16400	0.61	+0.8
3,718,791	-		PFLU_RS16400	0.61	+1.8
3,718,791	-		PFLU_RS16400	0.61	-0.9
3,718,791	-		PFLU_RS16400	0.61	-2.6
3,718,791	-		PFLU_RS16400	0.61	+1.2
3,718,791	-		PFLU_RS16400	0.61	-0.7
3,718,791	-		PFLU_RS16400	0.61	-0.9
3,718,791	-		PFLU_RS16400	0.61	-0.9
3,718,791	-		PFLU_RS16400	0.61	-0.6
3,718,791	-		PFLU_RS16400	0.61	-0.1
3,718,793	+		PFLU_RS16400	0.61	-0.5
3,718,793	+		PFLU_RS16400	0.61	+0.3
3,718,793	+		PFLU_RS16400	0.61	-1.0
3,718,793	+		PFLU_RS16400	0.61	+0.8
3,718,793	+		PFLU_RS16400	0.61	-0.3
3,718,793	+		PFLU_RS16400	0.61	+0.7
3,718,793	+		PFLU_RS16400	0.61	+0.6
3,718,793	+		PFLU_RS16400	0.61	+0.4
3,718,793	+		PFLU_RS16400	0.61	+0.9
3,718,793	+		PFLU_RS16400	0.61	+0.3
3,718,793	+		PFLU_RS16400	0.61	-0.1
3,718,794	-		PFLU_RS16400	0.61	-0.4
3,718,794	-		PFLU_RS16400	0.61	-0.9
3,718,794	-		PFLU_RS16400	0.61	+0.9
3,718,794	-		PFLU_RS16400	0.61	+0.2
3,718,794	-		PFLU_RS16400	0.61	-0.5
3,718,794	-		PFLU_RS16400	0.61	-1.7
3,718,794	-		PFLU_RS16400	0.61	+0.6
3,718,838	+		PFLU_RS16400	0.66	-0.4
3,718,838	+		PFLU_RS16400	0.66	-1.0
3,718,838	+		PFLU_RS16400	0.66	+2.1
3,718,838	+		PFLU_RS16400	0.66	-0.6
3,718,838	+		PFLU_RS16400	0.66	-1.2
3,718,838	+		PFLU_RS16400	0.66	+0.7
3,718,838	+		PFLU_RS16400	0.66	+0.8
3,718,838	+		PFLU_RS16400	0.66	-1.6
3,718,838	+		PFLU_RS16400	0.66	+0.6
3,718,838	+		PFLU_RS16400	0.66	-0.3
3,718,838	+		PFLU_RS16400	0.66	+0.1
3,718,839	-		PFLU_RS16400	0.66	-0.3
3,718,839	-		PFLU_RS16400	0.66	+0.4
3,718,839	-		PFLU_RS16400	0.66	-0.6
3,718,839	-		PFLU_RS16400	0.66	+1.4
3,718,839	-		PFLU_RS16400	0.66	+0.6
3,718,839	-		PFLU_RS16400	0.66	+0.3
3,718,839	-		PFLU_RS16400	0.66	-1.3
3,718,839	-		PFLU_RS16400	0.66	+0.2
3,718,839	-		PFLU_RS16400	0.66	+0.9
3,718,839	-		PFLU_RS16400	0.66	+0.4
3,718,867	+		PFLU_RS16400	0.69	-0.2
3,718,925	+		PFLU_RS16400	0.75	-0.1
3,718,925	+		PFLU_RS16400	0.75	+0.3
3,718,926	-		PFLU_RS16400	0.75	-1.4
3,718,926	-		PFLU_RS16400	0.75	-0.3
3,718,926	-		PFLU_RS16400	0.75	+0.3
3,718,926	-		PFLU_RS16400	0.75	+0.6
3,718,926	-		PFLU_RS16400	0.75	-0.3
3,718,928	+		PFLU_RS16400	0.75	+0.6
3,718,928	+		PFLU_RS16400	0.75	-0.7
3,718,928	+		PFLU_RS16400	0.75	+0.1
3,718,929	-		PFLU_RS16400	0.75	-1.4
3,718,929	-		PFLU_RS16400	0.75	-0.4
3,719,039	+		PFLU_RS16400	0.86	-0.2
3,719,040	-		PFLU_RS16400	0.86	+0.4
3,719,040	-		PFLU_RS16400	0.86	+2.6
3,719,177	+				+0.2
3,719,213	+				-1.8
3,719,385	+		PFLU_RS16405	0.19	-0.5
3,719,385	+		PFLU_RS16405	0.19	+0.5
3,719,424	+		PFLU_RS16405	0.23	-1.2
3,719,515	+		PFLU_RS16405	0.32	-0.0
3,719,515	+		PFLU_RS16405	0.32	+1.3
3,719,515	+		PFLU_RS16405	0.32	+0.7
3,719,515	+		PFLU_RS16405	0.32	-0.3
3,719,515	+		PFLU_RS16405	0.32	-0.1
3,719,515	+		PFLU_RS16405	0.32	+0.5
3,719,515	+		PFLU_RS16405	0.32	-0.1
3,719,516	-		PFLU_RS16405	0.32	+0.1
3,719,516	-		PFLU_RS16405	0.32	+0.8
3,719,516	-		PFLU_RS16405	0.32	-0.6
3,719,516	-		PFLU_RS16405	0.32	-0.4
3,719,516	-		PFLU_RS16405	0.32	-1.6
3,719,516	-		PFLU_RS16405	0.32	+0.9
3,719,516	-		PFLU_RS16405	0.32	+0.9
3,719,516	-		PFLU_RS16405	0.32	+0.4
3,719,516	-		PFLU_RS16405	0.32	+0.5
3,719,518	-		PFLU_RS16405	0.33	+0.4
3,719,635	+		PFLU_RS16405	0.45	-0.3
3,719,989	+		PFLU_RS16405	0.82	-0.9
3,719,989	+		PFLU_RS16405	0.82	+0.3
3,719,989	+		PFLU_RS16405	0.82	-0.1
3,719,990	-		PFLU_RS16405	0.82	+1.2
3,719,990	-		PFLU_RS16405	0.82	-0.3
3,719,990	-		PFLU_RS16405	0.82	+0.7
3,719,990	-		PFLU_RS16405	0.82	+0.1
3,719,990	-		PFLU_RS16405	0.82	+0.5
3,719,990	-		PFLU_RS16405	0.82	-0.3
3,720,065	-				-0.4
3,720,171	-				-0.2
3,720,171	-				+0.2
3,720,171	-				-0.2
3,720,171	-				-0.6
3,720,171	-				-0.0
3,720,171	-				+1.0
3,720,171	-				+0.4
3,720,171	-				+0.2
3,720,171	-				+0.1
3,720,171	-				-0.0
3,720,171	-				+1.0
3,720,171	-				-0.8